RNA–Protein interactions for RNA: ENST00000539409.5

FAM60A-206, Transcript of Protein FAM60A, humanhuman

TSL 1 (best) BASIC

Gene FAM60A, Length 2,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM60A-206ENST00000539409 FYB1O15117 783 aa15.56■□□□□ 0.08
FAM60A-206ENST00000539409 PIK3C2AO00443 1686 aa15.55■□□□□ 0.08
FAM60A-206ENST00000539409 TRPM3Q9HCF6 1732 aaPredicted RBP15.55■□□□□ 0.08
FAM60A-206ENST00000539409 FOXO3O43524 673 aa15.55■□□□□ 0.08
FAM60A-206ENST00000539409 BRINP3Q76B58 766 aa15.55■□□□□ 0.08
FAM60A-206ENST00000539409 BRD4O60885 1362 aaPredicted RBP15.54■□□□□ 0.08
FAM60A-206ENST00000539409 NME9Q86XW9 330 aa15.54■□□□□ 0.08
FAM60A-206ENST00000539409 GGNBP2Q9H3C7 697 aa15.54■□□□□ 0.08
FAM60A-206ENST00000539409 IQSEC2Q5JU85 1478 aa15.53■□□□□ 0.08
FAM60A-206ENST00000539409 TTC21AQ8NDW8 1320 aa15.53■□□□□ 0.08
FAM60A-206ENST00000539409 MYBBP1AQ9BQG0 1328 aaKnown RBP15.52■□□□□ 0.08
FAM60A-206ENST00000539409 PSME1Q06323 249 aa15.52■□□□□ 0.08
FAM60A-206ENST00000539409 PXDNQ92626 1479 aa15.52■□□□□ 0.07
FAM60A-206ENST00000539409 USP54Q70EL1 1684 aa15.52■□□□□ 0.07
FAM60A-206ENST00000539409 NHSL1Q5SYE7 1610 aa15.51■□□□□ 0.07
FAM60A-206ENST00000539409 OVOS2A0A0J9YW53 1432 aa15.51■□□□□ 0.07
FAM60A-206ENST00000539409 OVOS2Q6IE36 1432 aa15.51■□□□□ 0.07
FAM60A-206ENST00000539409 ROBO1Q9Y6N7 1651 aa15.51■□□□□ 0.07
FAM60A-206ENST00000539409 MARF1Q9Y4F3 1742 aaKnown RBP15.51■□□□□ 0.07
FAM60A-206ENST00000539409 NPHP3Q7Z494 1330 aa15.51■□□□□ 0.07
FAM60A-206ENST00000539409 CCER2I3L3R5 266 aa15.51■□□□□ 0.07
FAM60A-206ENST00000539409 XPCQ01831 940 aaPredicted RBP15.51■□□□□ 0.07
FAM60A-206ENST00000539409 MORC1Q86VD1 984 aa15.51■□□□□ 0.07
FAM60A-206ENST00000539409 ZRANB1Q9UGI0 708 aa15.51■□□□□ 0.07
FAM60A-206ENST00000539409 DDX17Q92841 729 aaKnown RBP15.5■□□□□ 0.07
FAM60A-206ENST00000539409 ALS2Q96Q42 1657 aa15.49■□□□□ 0.07
FAM60A-206ENST00000539409 KRT28Q7Z3Y7 464 aa15.49■□□□□ 0.07
FAM60A-206ENST00000539409 PAK3O75914 559 aaPredicted RBP15.49■□□□□ 0.07
FAM60A-206ENST00000539409 PPP2R1AP30153 589 aa15.49■□□□□ 0.07
FAM60A-206ENST00000539409 USP31Q70CQ4 1352 aa15.48■□□□□ 0.07
FAM60A-206ENST00000539409 NLRP13Q86W25 1043 aa15.48■□□□□ 0.07
FAM60A-206ENST00000539409 COG3Q96JB2 828 aa15.48■□□□□ 0.07
FAM60A-206ENST00000539409 TNNT2P45379 298 aaPredicted RBP15.47■□□□□ 0.07
FAM60A-206ENST00000539409 CCDC184Q52MB2 194 aa15.47■□□□□ 0.07
FAM60A-206ENST00000539409 SBNO1A3KN83 1393 aa15.47■□□□□ 0.07
FAM60A-206ENST00000539409 CERKQ8TCT0 537 aa15.47■□□□□ 0.07
FAM60A-206ENST00000539409 SCAF1Q9H7N4 1312 aaKnown RBP15.46■□□□□ 0.07
FAM60A-206ENST00000539409 ABTB2Q8N961 1025 aa15.46■□□□□ 0.06
FAM60A-206ENST00000539409 AHDC1Q5TGY3 1603 aaPredicted RBP15.46■□□□□ 0.06
FAM60A-206ENST00000539409 SOS2Q07890 1332 aaPredicted RBP15.45■□□□□ 0.06
FAM60A-206ENST00000539409 TNS3Q68CZ2 1445 aa15.45■□□□□ 0.06
FAM60A-206ENST00000539409 TOM1O60784 492 aa15.45■□□□□ 0.06
FAM60A-206ENST00000539409 NLRP6P59044 892 aa15.44■□□□□ 0.06
FAM60A-206ENST00000539409 NUTM2GQ5VZR2 741 aa15.44■□□□□ 0.06
FAM60A-206ENST00000539409 MRS2Q9HD23 443 aa15.44■□□□□ 0.06
FAM60A-206ENST00000539409 AATKQ6ZMQ8 1374 aa15.43■□□□□ 0.06
FAM60A-206ENST00000539409 UBAP1LF5GYI3 381 aa15.43■□□□□ 0.06
FAM60A-206ENST00000539409 SPATA31A3Q5VYP0 1347 aa15.42■□□□□ 0.06
FAM60A-206ENST00000539409 MAP2P11137 1827 aaKnown RBP15.42■□□□□ 0.06
FAM60A-206ENST00000539409 SLIT3O75094 1523 aa15.42■□□□□ 0.06
FAM60A-206ENST00000539409 SMG6Q86US8 1419 aaKnown RBP15.42■□□□□ 0.06
FAM60A-206ENST00000539409 FBLN1P23142 703 aa15.41■□□□□ 0.06
FAM60A-206ENST00000539409 MED1Q15648 1581 aaPredicted RBP15.41■□□□□ 0.06
FAM60A-206ENST00000539409 CRYBG1Q9Y4K1 1723 aa15.41■□□□□ 0.06
FAM60A-206ENST00000539409 NFAT5O94916 1531 aa15.41■□□□□ 0.06
FAM60A-206ENST00000539409 USP19O94966 1318 aa15.4■□□□□ 0.06
FAM60A-206ENST00000539409 MTHFSP49914 203 aa15.4■□□□□ 0.06
FAM60A-206ENST00000539409 LMOD2Q6P5Q4 547 aa15.4■□□□□ 0.06
FAM60A-206ENST00000539409 ARHGEF10O15013 1369 aa15.4■□□□□ 0.06
FAM60A-206ENST00000539409 PHRF1Q9P1Y6 1649 aaKnown RBP15.4■□□□□ 0.06
FAM60A-206ENST00000539409 PIP4K2BP78356 416 aa15.4■□□□□ 0.06
FAM60A-206ENST00000539409 PHLPP1O60346 1717 aa15.39■□□□□ 0.05
FAM60A-206ENST00000539409 POLKQ9UBT6 870 aa15.39■□□□□ 0.05
FAM60A-206ENST00000539409 COL16A1Q07092 1604 aaPredicted RBP15.39■□□□□ 0.05
FAM60A-206ENST00000539409 PEAK1Q9H792 1746 aa15.38■□□□□ 0.05
FAM60A-206ENST00000539409 COL3A1P02461 1466 aaPredicted RBP15.38■□□□□ 0.05
FAM60A-206ENST00000539409 CDK12Q9NYV4 1490 aaPredicted RBP15.38■□□□□ 0.05
FAM60A-206ENST00000539409 SOX12O15370 315 aa15.38■□□□□ 0.05
FAM60A-206ENST00000539409 RRS1Q15050 365 aaKnown RBP15.38■□□□□ 0.05
FAM60A-206ENST00000539409 EMILIN1Q9Y6C2 1016 aa15.38■□□□□ 0.05
FAM60A-206ENST00000539409 SHPRHQ149N8 1683 aa15.37■□□□□ 0.05
FAM60A-206ENST00000539409 LTN1O94822 1766 aa15.37■□□□□ 0.05
FAM60A-206ENST00000539409 ABCA3Q99758 1704 aa15.37■□□□□ 0.05
FAM60A-206ENST00000539409 PNPLA6Q8IY17 1366 aa15.36■□□□□ 0.05
FAM60A-206ENST00000539409 PNISRQ8TF01 805 aaKnown RBP15.36■□□□□ 0.05
FAM60A-206ENST00000539409 MAP3K19Q56UN5 1328 aa15.35■□□□□ 0.05
FAM60A-206ENST00000539409 KCNH5Q8NCM2 988 aa15.35■□□□□ 0.05
FAM60A-206ENST00000539409 GCP02774 474 aa15.35■□□□□ 0.05
FAM60A-206ENST00000539409 INSRP06213 1382 aa15.34■□□□□ 0.05
FAM60A-206ENST00000539409 COL22A1Q8NFW1 1626 aaPredicted RBP15.34■□□□□ 0.05
FAM60A-206ENST00000539409 PPM1GO15355 546 aaPredicted RBP15.34■□□□□ 0.05
FAM60A-206ENST00000539409 PLEKHG5O94827 1062 aa15.34■□□□□ 0.05
FAM60A-206ENST00000539409 CFAP53Q96M91 514 aa15.34■□□□□ 0.05
FAM60A-206ENST00000539409 LRRC59Q96AG4 307 aaKnown RBP15.33■□□□□ 0.04
FAM60A-206ENST00000539409 CABLES1Q8TDN4 633 aa15.33■□□□□ 0.04
FAM60A-206ENST00000539409 FLT4P35916 1363 aa15.32■□□□□ 0.04
FAM60A-206ENST00000539409 KIF24Q5T7B8 1368 aa15.32■□□□□ 0.04
FAM60A-206ENST00000539409 FAM9BQ8IZU0 186 aa15.32■□□□□ 0.04
FAM60A-206ENST00000539409 RTL1A6NKG5 1358 aa15.31■□□□□ 0.04
FAM60A-206ENST00000539409 ARHGEF25Q86VW2 580 aa15.3■□□□□ 0.04
FAM60A-206ENST00000539409 HOXC9P31274 260 aa15.28■□□□□ 0.04
FAM60A-206ENST00000539409 AMPHP49418 695 aa15.28■□□□□ 0.04
FAM60A-206ENST00000539409 WDR43Q15061 677 aaKnown RBP eCLIP15.28■□□□□ 0.04
FAM60A-206ENST00000539409 HSP90AB2PQ58FF8 381 aa15.28■□□□□ 0.04
FAM60A-206ENST00000539409 DIAPH1O60610 1272 aaKnown RBP15.28■□□□□ 0.04
FAM60A-206ENST00000539409 CPDO75976 1380 aa15.28■□□□□ 0.04
FAM60A-206ENST00000539409 ABCC6O95255 1503 aa15.27■□□□□ 0.04
FAM60A-206ENST00000539409 COL18A1P39060 1754 aa15.27■□□□□ 0.04
FAM60A-206ENST00000539409 ZC3H6P61129 1189 aaKnown RBP15.27■□□□□ 0.03
FAM60A-206ENST00000539409 ADAMTS8Q9UP79 889 aa15.27■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 222.1 ms