RNA–Protein interactions for RNA: ENST00000539284.2

VAV1-202, Transcript of vav guanine nucleotide exchange factor 1, humanhuman

TSL 5 BASIC

Gene VAV1, Length 2,627 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAV1-202ENST00000539284 PRKCSHP14314 528 aaPredicted RBP17.32■□□□□ 0.36
VAV1-202ENST00000539284 STRCP1A6NGW2 1772 aa17.32■□□□□ 0.36
VAV1-202ENST00000539284 OVOS2A0A0J9YW53 1432 aa17.29■□□□□ 0.36
VAV1-202ENST00000539284 OVOS2Q6IE36 1432 aa17.29■□□□□ 0.36
VAV1-202ENST00000539284 PDE3BQ13370 1112 aa17.29■□□□□ 0.36
VAV1-202ENST00000539284 CDK12Q9NYV4 1490 aaPredicted RBP17.28■□□□□ 0.36
VAV1-202ENST00000539284 NCKAP5LQ9HCH0 1330 aa17.28■□□□□ 0.36
VAV1-202ENST00000539284 PLPPR3Q6T4P5 718 aa17.28■□□□□ 0.36
VAV1-202ENST00000539284 HNRNPUQ00839 825 aaKnown RBP eCLIP17.27■□□□□ 0.36
VAV1-202ENST00000539284 FAM9BQ8IZU0 186 aa17.27■□□□□ 0.36
VAV1-202ENST00000539284 MARF1Q9Y4F3 1742 aaKnown RBP17.27■□□□□ 0.35
VAV1-202ENST00000539284 PHRF1Q9P1Y6 1649 aaKnown RBP17.27■□□□□ 0.35
VAV1-202ENST00000539284 CFAP53Q96M91 514 aa17.27■□□□□ 0.35
VAV1-202ENST00000539284 KIF24Q5T7B8 1368 aa17.26■□□□□ 0.35
VAV1-202ENST00000539284 MAP2P11137 1827 aaKnown RBP17.26■□□□□ 0.35
VAV1-202ENST00000539284 PIK3C2AO00443 1686 aa17.25■□□□□ 0.35
VAV1-202ENST00000539284 XIRP1Q702N8 1843 aaKnown RBP17.25■□□□□ 0.35
VAV1-202ENST00000539284 ACEP12821 1306 aa17.24■□□□□ 0.35
VAV1-202ENST00000539284 TTC21BQ7Z4L5 1316 aa17.23■□□□□ 0.35
VAV1-202ENST00000539284 WDR43Q15061 677 aaKnown RBP eCLIP17.23■□□□□ 0.35
VAV1-202ENST00000539284 TRPM3Q9HCF6 1732 aaPredicted RBP17.23■□□□□ 0.35
VAV1-202ENST00000539284 IQSEC2Q5JU85 1478 aa17.22■□□□□ 0.35
VAV1-202ENST00000539284 C19orf44Q9H6X5 657 aa17.2■□□□□ 0.34
VAV1-202ENST00000539284 SENP3Q9H4L4 574 aaPredicted RBP17.19■□□□□ 0.34
VAV1-202ENST00000539284 DMRT2Q9Y5R5 561 aa17.19■□□□□ 0.34
VAV1-202ENST00000539284 MTHFSP49914 203 aa17.18■□□□□ 0.34
VAV1-202ENST00000539284 COG3Q96JB2 828 aa17.18■□□□□ 0.34
VAV1-202ENST00000539284 PNNQ9H307 717 aaKnown RBP17.18■□□□□ 0.34
VAV1-202ENST00000539284 ADAMTS8Q9UP79 889 aa17.18■□□□□ 0.34
VAV1-202ENST00000539284 RGPD1P0DJD0 1748 aa17.18■□□□□ 0.34
VAV1-202ENST00000539284 C1orf167Q5SNV9 1468 aa17.17■□□□□ 0.34
VAV1-202ENST00000539284 ZNF521Q96K83 1311 aa17.17■□□□□ 0.34
VAV1-202ENST00000539284 GGNBP2Q9H3C7 697 aa17.16■□□□□ 0.34
VAV1-202ENST00000539284 NUDCQ9Y266 331 aa17.16■□□□□ 0.34
VAV1-202ENST00000539284 ALS2Q96Q42 1657 aa17.16■□□□□ 0.34
VAV1-202ENST00000539284 SLIT3O75094 1523 aa17.16■□□□□ 0.34
VAV1-202ENST00000539284 ABCC6O95255 1503 aa17.16■□□□□ 0.34
VAV1-202ENST00000539284 CCDC27Q2M243 656 aa17.15■□□□□ 0.34
VAV1-202ENST00000539284 PHF8Q9UPP1 1060 aa17.15■□□□□ 0.34
VAV1-202ENST00000539284 PROSER2Q86WR7 435 aaPredicted RBP17.14■□□□□ 0.33
VAV1-202ENST00000539284 RTL1A6NKG5 1358 aa17.14■□□□□ 0.33
VAV1-202ENST00000539284 POLKQ9UBT6 870 aa17.14■□□□□ 0.33
VAV1-202ENST00000539284 ERICH6BQ5W0A0 696 aa17.13■□□□□ 0.33
VAV1-202ENST00000539284 RUNDC1Q96C34 613 aa17.13■□□□□ 0.33
VAV1-202ENST00000539284 PHF23Q9BUL5 403 aaPredicted RBP17.13■□□□□ 0.33
VAV1-202ENST00000539284 TMEM94Q12767 1356 aa17.12■□□□□ 0.33
VAV1-202ENST00000539284 PEAK1Q9H792 1746 aa17.12■□□□□ 0.33
VAV1-202ENST00000539284 MED1Q15648 1581 aaPredicted RBP17.12■□□□□ 0.33
VAV1-202ENST00000539284 NME9Q86XW9 330 aa17.12■□□□□ 0.33
VAV1-202ENST00000539284 NGDNQ8NEJ9 315 aaKnown RBP17.11■□□□□ 0.33
VAV1-202ENST00000539284 SBNO1A3KN83 1393 aa17.11■□□□□ 0.33
VAV1-202ENST00000539284 NFAT5O94916 1531 aa17.11■□□□□ 0.33
VAV1-202ENST00000539284 CADPS2Q86UW7 1296 aa17.11■□□□□ 0.33
VAV1-202ENST00000539284 RNF123Q5XPI4 1314 aa17.11■□□□□ 0.33
VAV1-202ENST00000539284 MSH6P52701 1360 aa17.1■□□□□ 0.33
VAV1-202ENST00000539284 DIAPH1O60610 1272 aaKnown RBP17.09■□□□□ 0.33
VAV1-202ENST00000539284 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.09■□□□□ 0.33
VAV1-202ENST00000539284 FCHSD2O94868 740 aa17.09■□□□□ 0.33
VAV1-202ENST00000539284 TSHZ2Q9NRE2 1034 aa17.08■□□□□ 0.33
VAV1-202ENST00000539284 CRYBG1Q9Y4K1 1723 aa17.08■□□□□ 0.33
VAV1-202ENST00000539284 TRMT2AQ8IZ69 625 aaKnown RBP17.08■□□□□ 0.32
VAV1-202ENST00000539284 CNGB1Q14028 1251 aaPredicted RBP17.07■□□□□ 0.32
VAV1-202ENST00000539284 PLEKHG2Q9H7P9 1386 aa17.07■□□□□ 0.32
VAV1-202ENST00000539284 PLEKHF1Q96S99 279 aa17.06■□□□□ 0.32
VAV1-202ENST00000539284 LTN1O94822 1766 aa17.06■□□□□ 0.32
VAV1-202ENST00000539284 CAMTA1Q9Y6Y1 1673 aa17.06■□□□□ 0.32
VAV1-202ENST00000539284 IL13P35225 146 aa17.06■□□□□ 0.32
VAV1-202ENST00000539284 FLT4P35916 1363 aa17.06■□□□□ 0.32
VAV1-202ENST00000539284 USP19O94966 1318 aa17.05■□□□□ 0.32
VAV1-202ENST00000539284 NHSL1Q5SYE7 1610 aa17.05■□□□□ 0.32
VAV1-202ENST00000539284 WDR63Q8IWG1 891 aa17.05■□□□□ 0.32
VAV1-202ENST00000539284 ATF3P18847 181 aa17.04■□□□□ 0.32
VAV1-202ENST00000539284 HSPA2P54652 639 aa17.04■□□□□ 0.32
VAV1-202ENST00000539284 ARHGEF10O15013 1369 aa17.04■□□□□ 0.32
VAV1-202ENST00000539284 PXDNQ92626 1479 aa17.04■□□□□ 0.32
VAV1-202ENST00000539284 KCNH5Q8NCM2 988 aa17.03■□□□□ 0.32
VAV1-202ENST00000539284 PSME1Q06323 249 aa17.03■□□□□ 0.32
VAV1-202ENST00000539284 IL16Q14005 1332 aa17.03■□□□□ 0.32
VAV1-202ENST00000539284 PMFBP1Q8TBY8 1022 aa17.02■□□□□ 0.32
VAV1-202ENST00000539284 FAM208AQ9UK61 1670 aaKnown RBP17.02■□□□□ 0.32
VAV1-202ENST00000539284 TNNT2P45379 298 aaPredicted RBP17.01■□□□□ 0.31
VAV1-202ENST00000539284 NCAPD2Q15021 1401 aa17.01■□□□□ 0.31
VAV1-202ENST00000539284 SUPT16HQ9Y5B9 1047 aaKnown RBP17.01■□□□□ 0.31
VAV1-202ENST00000539284 GOLGA2Q08379 1002 aa17■□□□□ 0.31
VAV1-202ENST00000539284 ESCO1Q5FWF5 840 aa17■□□□□ 0.31
VAV1-202ENST00000539284 C14orf37Q86TY3 774 aa17■□□□□ 0.31
VAV1-202ENST00000539284 LTBP4Q8N2S1 1624 aa17■□□□□ 0.31
VAV1-202ENST00000539284 KDRP35968 1356 aa17■□□□□ 0.31
VAV1-202ENST00000539284 E9PSI1 815 aa17■□□□□ 0.31
VAV1-202ENST00000539284 RSPH6AQ9H0K4 717 aa17■□□□□ 0.31
VAV1-202ENST00000539284 NPHP3Q7Z494 1330 aa16.99■□□□□ 0.31
VAV1-202ENST00000539284 SLFN5Q08AF3 891 aa16.99■□□□□ 0.31
VAV1-202ENST00000539284 ZRANB1Q9UGI0 708 aa16.99■□□□□ 0.31
VAV1-202ENST00000539284 U2AF1L5P0DN76 240 aaPredicted RBP16.98■□□□□ 0.31
VAV1-202ENST00000539284 U2AF1Q01081 240 aaKnown RBP eCLIP16.98■□□□□ 0.31
VAV1-202ENST00000539284 LMO7Q8WWI1 1683 aa16.98■□□□□ 0.31
VAV1-202ENST00000539284 APAF1O14727 1248 aa16.98■□□□□ 0.31
VAV1-202ENST00000539284 EMILIN1Q9Y6C2 1016 aa16.98■□□□□ 0.31
VAV1-202ENST00000539284 TNS3Q68CZ2 1445 aa16.97■□□□□ 0.31
VAV1-202ENST00000539284 TCP11L2Q8N4U5 519 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms