RNA–Protein interactions for RNA: ENST00000538740.1

DDX11-212, Transcript of DEAD/H-box helicase 11, humanhuman

TSL 5

Gene DDX11, Length 750 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-212ENST00000538740 PIP4K2BP78356 416 aa24.29■■□□□ 1.48
DDX11-212ENST00000538740 NGDNQ8NEJ9 315 aaKnown RBP24.28■■□□□ 1.48
DDX11-212ENST00000538740 PNISRQ8TF01 805 aaKnown RBP24.28■■□□□ 1.48
DDX11-212ENST00000538740 C19orf44Q9H6X5 657 aa24.28■■□□□ 1.48
DDX11-212ENST00000538740 INSRP06213 1382 aa24.28■■□□□ 1.48
DDX11-212ENST00000538740 FYB1O15117 783 aa24.27■■□□□ 1.48
DDX11-212ENST00000538740 TTC21AQ8NDW8 1320 aa24.27■■□□□ 1.48
DDX11-212ENST00000538740 SCAF1Q9H7N4 1312 aaKnown RBP24.27■■□□□ 1.48
DDX11-212ENST00000538740 CFAP53Q96M91 514 aa24.26■■□□□ 1.47
DDX11-212ENST00000538740 TMEM94Q12767 1356 aa24.26■■□□□ 1.47
DDX11-212ENST00000538740 SUGP2Q8IX01 1082 aaKnown RBP eCLIP24.25■■□□□ 1.47
DDX11-212ENST00000538740 GGNBP2Q9H3C7 697 aa24.25■■□□□ 1.47
DDX11-212ENST00000538740 MSH6P52701 1360 aa24.25■■□□□ 1.47
DDX11-212ENST00000538740 ATF3P18847 181 aa24.23■■□□□ 1.47
DDX11-212ENST00000538740 WDR43Q15061 677 aaKnown RBP eCLIP24.23■■□□□ 1.47
DDX11-212ENST00000538740 PHF8Q9UPP1 1060 aa24.23■■□□□ 1.47
DDX11-212ENST00000538740 MED1Q15648 1581 aaPredicted RBP24.23■■□□□ 1.47
DDX11-212ENST00000538740 XIRP1Q702N8 1843 aaKnown RBP24.23■■□□□ 1.47
DDX11-212ENST00000538740 TTC21BQ7Z4L5 1316 aa24.22■■□□□ 1.47
DDX11-212ENST00000538740 HNRNPUQ00839 825 aaKnown RBP eCLIP24.22■■□□□ 1.47
DDX11-212ENST00000538740 COG3Q96JB2 828 aa24.22■■□□□ 1.47
DDX11-212ENST00000538740 PMFBP1Q8TBY8 1022 aa24.21■■□□□ 1.47
DDX11-212ENST00000538740 MAP2P11137 1827 aaKnown RBP24.2■■□□□ 1.46
DDX11-212ENST00000538740 CADPS2Q86UW7 1296 aa24.2■■□□□ 1.46
DDX11-212ENST00000538740 RBM33Q96EV2 1170 aaKnown RBP24.2■■□□□ 1.46
DDX11-212ENST00000538740 USP54Q70EL1 1684 aa24.19■■□□□ 1.46
DDX11-212ENST00000538740 TNNT2P45379 298 aaPredicted RBP24.19■■□□□ 1.46
DDX11-212ENST00000538740 LRRC7Q96NW7 1537 aa24.19■■□□□ 1.46
DDX11-212ENST00000538740 SSH2Q76I76 1423 aa24.18■■□□□ 1.46
DDX11-212ENST00000538740 C1orf167Q5SNV9 1468 aa24.16■■□□□ 1.46
DDX11-212ENST00000538740 ESCO1Q5FWF5 840 aa24.16■■□□□ 1.46
DDX11-212ENST00000538740 NME9Q86XW9 330 aa24.16■■□□□ 1.46
DDX11-212ENST00000538740 AATKQ6ZMQ8 1374 aa24.16■■□□□ 1.46
DDX11-212ENST00000538740 OVOS2A0A0J9YW53 1432 aa24.14■■□□□ 1.45
DDX11-212ENST00000538740 MTHFSP49914 203 aa24.14■■□□□ 1.45
DDX11-212ENST00000538740 MST1RQ04912 1400 aa24.14■■□□□ 1.45
DDX11-212ENST00000538740 OVOS2Q6IE36 1432 aa24.14■■□□□ 1.45
DDX11-212ENST00000538740 PIK3C2AO00443 1686 aa24.14■■□□□ 1.45
DDX11-212ENST00000538740 SHPRHQ149N8 1683 aa24.14■■□□□ 1.45
DDX11-212ENST00000538740 BLMP54132 1417 aaPredicted RBP24.13■■□□□ 1.45
DDX11-212ENST00000538740 USP31Q70CQ4 1352 aa24.13■■□□□ 1.45
DDX11-212ENST00000538740 ZBED9Q6R2W3 1325 aa24.12■■□□□ 1.45
DDX11-212ENST00000538740 SMG6Q86US8 1419 aaKnown RBP24.1■■□□□ 1.45
DDX11-212ENST00000538740 PSME1Q06323 249 aa24.1■■□□□ 1.45
DDX11-212ENST00000538740 NUDCQ9Y266 331 aa24.1■■□□□ 1.45
DDX11-212ENST00000538740 CDK12Q9NYV4 1490 aaPredicted RBP24.1■■□□□ 1.45
DDX11-212ENST00000538740 TRPM3Q9HCF6 1732 aaPredicted RBP24.06■■□□□ 1.44
DDX11-212ENST00000538740 PAK3O75914 559 aaPredicted RBP24.05■■□□□ 1.44
DDX11-212ENST00000538740 MARF1Q9Y4F3 1742 aaKnown RBP24.04■■□□□ 1.44
DDX11-212ENST00000538740 ORAI2Q96SN7 254 aa24.04■■□□□ 1.44
DDX11-212ENST00000538740 ADAMTS8Q9UP79 889 aa24.04■■□□□ 1.44
DDX11-212ENST00000538740 COL3A1P02461 1466 aaPredicted RBP24.04■■□□□ 1.44
DDX11-212ENST00000538740 ABTB2Q8N961 1025 aa24.03■■□□□ 1.44
DDX11-212ENST00000538740 PHF23Q9BUL5 403 aaPredicted RBP24.03■■□□□ 1.44
DDX11-212ENST00000538740 PNPLA6Q8IY17 1366 aa24.03■■□□□ 1.44
DDX11-212ENST00000538740 NLRP6P59044 892 aa24.02■■□□□ 1.44
DDX11-212ENST00000538740 POLKQ9UBT6 870 aa24.02■■□□□ 1.44
DDX11-212ENST00000538740 ZRANB1Q9UGI0 708 aa24.02■■□□□ 1.44
DDX11-212ENST00000538740 NPHP3Q7Z494 1330 aa24.02■■□□□ 1.44
DDX11-212ENST00000538740 DIAPH1O60610 1272 aaKnown RBP24.01■■□□□ 1.43
DDX11-212ENST00000538740 NGEFQ8N5V2 710 aa24.01■■□□□ 1.43
DDX11-212ENST00000538740 PNNQ9H307 717 aaKnown RBP24.01■■□□□ 1.43
DDX11-212ENST00000538740 FOXO3O43524 673 aa23.99■■□□□ 1.43
DDX11-212ENST00000538740 KIF24Q5T7B8 1368 aa23.99■■□□□ 1.43
DDX11-212ENST00000538740 PPM1GO15355 546 aaPredicted RBP23.98■■□□□ 1.43
DDX11-212ENST00000538740 KRT28Q7Z3Y7 464 aa23.98■■□□□ 1.43
DDX11-212ENST00000538740 ALS2Q96Q42 1657 aa23.98■■□□□ 1.43
DDX11-212ENST00000538740 SBNO1A3KN83 1393 aa23.97■■□□□ 1.43
DDX11-212ENST00000538740 KCNH5Q8NCM2 988 aa23.96■■□□□ 1.43
DDX11-212ENST00000538740 LTN1O94822 1766 aa23.96■■□□□ 1.43
DDX11-212ENST00000538740 U2AF1L5P0DN76 240 aaPredicted RBP23.95■■□□□ 1.42
DDX11-212ENST00000538740 U2AF1Q01081 240 aaKnown RBP eCLIP23.95■■□□□ 1.42
DDX11-212ENST00000538740 PDE3BQ13370 1112 aa23.94■■□□□ 1.42
DDX11-212ENST00000538740 EMILIN1Q9Y6C2 1016 aa23.94■■□□□ 1.42
DDX11-212ENST00000538740 FLT4P35916 1363 aa23.93■■□□□ 1.42
DDX11-212ENST00000538740 U2SURPO15042 1029 aaKnown RBP23.93■■□□□ 1.42
DDX11-212ENST00000538740 RUNDC1Q96C34 613 aa23.93■■□□□ 1.42
DDX11-212ENST00000538740 SLAIN2Q9P270 581 aa23.93■■□□□ 1.42
DDX11-212ENST00000538740 SLIT3O75094 1523 aa23.93■■□□□ 1.42
DDX11-212ENST00000538740 RTL1A6NKG5 1358 aa23.92■■□□□ 1.42
DDX11-212ENST00000538740 NEFMP07197 916 aa23.92■■□□□ 1.42
DDX11-212ENST00000538740 RRS1Q15050 365 aaKnown RBP23.92■■□□□ 1.42
DDX11-212ENST00000538740 PHRF1Q9P1Y6 1649 aaKnown RBP23.92■■□□□ 1.42
DDX11-212ENST00000538740 PEAK1Q9H792 1746 aa23.91■■□□□ 1.42
DDX11-212ENST00000538740 TNS3Q68CZ2 1445 aa23.91■■□□□ 1.42
DDX11-212ENST00000538740 NHSL1Q5SYE7 1610 aa23.91■■□□□ 1.42
DDX11-212ENST00000538740 ARHGEF10O15013 1369 aa23.9■■□□□ 1.42
DDX11-212ENST00000538740 PXDNQ92626 1479 aa23.89■■□□□ 1.42
DDX11-212ENST00000538740 AMPHP49418 695 aa23.89■■□□□ 1.41
DDX11-212ENST00000538740 BRINP3Q76B58 766 aa23.89■■□□□ 1.41
DDX11-212ENST00000538740 NFAT5O94916 1531 aa23.89■■□□□ 1.41
DDX11-212ENST00000538740 MAP3K19Q56UN5 1328 aa23.88■■□□□ 1.41
DDX11-212ENST00000538740 MAPK8IP3Q9UPT6 1336 aa23.88■■□□□ 1.41
DDX11-212ENST00000538740 NUTM2GQ5VZR2 741 aa23.88■■□□□ 1.41
DDX11-212ENST00000538740 LMOD2Q6P5Q4 547 aa23.88■■□□□ 1.41
DDX11-212ENST00000538740 RGS17Q9UGC6 210 aaPredicted RBP23.88■■□□□ 1.41
DDX11-212ENST00000538740 SOX12O15370 315 aa23.87■■□□□ 1.41
DDX11-212ENST00000538740 XPCQ01831 940 aaPredicted RBP23.87■■□□□ 1.41
DDX11-212ENST00000538740 NCBP3Q53F19 620 aaKnown RBP23.87■■□□□ 1.41
DDX11-212ENST00000538740 CCDC146Q8IYE0 955 aa23.87■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms