RNA–Protein interactions for RNA: ENST00000537582.1

SFSWAP-206, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 1,576 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-206ENST00000537582 KIF1AQ12756 1690 aa21.36■■□□□ 1.01
SFSWAP-206ENST00000537582 PARD3Q8TEW0 1356 aa21.36■■□□□ 1.01
SFSWAP-206ENST00000537582 NPC1L1Q9UHC9 1359 aa21.35■■□□□ 1.01
SFSWAP-206ENST00000537582 PSME1Q06323 249 aa21.33■■□□□ 1.01
SFSWAP-206ENST00000537582 KIF20BQ96Q89 1820 aa21.33■■□□□ 1
SFSWAP-206ENST00000537582 TNNT2P45379 298 aaPredicted RBP21.31■■□□□ 1
SFSWAP-206ENST00000537582 PAK3O75914 559 aaPredicted RBP21.3■■□□□ 1
SFSWAP-206ENST00000537582 CCDC184Q52MB2 194 aa21.3■■□□□ 1
SFSWAP-206ENST00000537582 KRT28Q7Z3Y7 464 aa21.3■■□□□ 1
SFSWAP-206ENST00000537582 PIK3C2AO00443 1686 aa21.3■■□□□ 1
SFSWAP-206ENST00000537582 RALBP1Q15311 655 aa21.29■■□□□ 1
SFSWAP-206ENST00000537582 MORC1Q86VD1 984 aa21.29■■□□□ 1
SFSWAP-206ENST00000537582 NSD2O96028 1365 aa21.29■■□□□ 1
SFSWAP-206ENST00000537582 TRPM3Q9HCF6 1732 aaPredicted RBP21.28■■□□□ 1
SFSWAP-206ENST00000537582 NUTM2GQ5VZR2 741 aa21.28■■□□□ 1
SFSWAP-206ENST00000537582 CERKQ8TCT0 537 aa21.28■■□□□ 1
SFSWAP-206ENST00000537582 PXDNQ92626 1479 aa21.27■■□□□ 1
SFSWAP-206ENST00000537582 ANKRD26Q9UPS8 1709 aa21.27■■□□□ 1
SFSWAP-206ENST00000537582 TTC21AQ8NDW8 1320 aa21.27■□□□□ 0.99
SFSWAP-206ENST00000537582 ROBO1Q9Y6N7 1651 aa21.27■□□□□ 0.99
SFSWAP-206ENST00000537582 NPHP3Q7Z494 1330 aa21.26■□□□□ 0.99
SFSWAP-206ENST00000537582 MYBBP1AQ9BQG0 1328 aaKnown RBP21.26■□□□□ 0.99
SFSWAP-206ENST00000537582 FBLN1P23142 703 aa21.26■□□□□ 0.99
SFSWAP-206ENST00000537582 OVOS2A0A0J9YW53 1432 aa21.25■□□□□ 0.99
SFSWAP-206ENST00000537582 OVOS2Q6IE36 1432 aa21.25■□□□□ 0.99
SFSWAP-206ENST00000537582 PPP2R1AP30153 589 aa21.25■□□□□ 0.99
SFSWAP-206ENST00000537582 UBAP1LF5GYI3 381 aa21.24■□□□□ 0.99
SFSWAP-206ENST00000537582 PIP4K2BP78356 416 aa21.24■□□□□ 0.99
SFSWAP-206ENST00000537582 ABTB2Q8N961 1025 aa21.23■□□□□ 0.99
SFSWAP-206ENST00000537582 MARF1Q9Y4F3 1742 aaKnown RBP21.23■□□□□ 0.99
SFSWAP-206ENST00000537582 COG3Q96JB2 828 aa21.23■□□□□ 0.99
SFSWAP-206ENST00000537582 IQSEC2Q5JU85 1478 aa21.22■□□□□ 0.99
SFSWAP-206ENST00000537582 BRD4O60885 1362 aaPredicted RBP21.22■□□□□ 0.99
SFSWAP-206ENST00000537582 NHSL1Q5SYE7 1610 aa21.22■□□□□ 0.99
SFSWAP-206ENST00000537582 TOM1O60784 492 aa21.22■□□□□ 0.99
SFSWAP-206ENST00000537582 PLEKHG5O94827 1062 aa21.22■□□□□ 0.99
SFSWAP-206ENST00000537582 NLRP6P59044 892 aa21.21■□□□□ 0.99
SFSWAP-206ENST00000537582 LMOD2Q6P5Q4 547 aa21.21■□□□□ 0.99
SFSWAP-206ENST00000537582 USP31Q70CQ4 1352 aa21.21■□□□□ 0.99
SFSWAP-206ENST00000537582 SCAF1Q9H7N4 1312 aaKnown RBP21.2■□□□□ 0.98
SFSWAP-206ENST00000537582 CCER2I3L3R5 266 aa21.2■□□□□ 0.98
SFSWAP-206ENST00000537582 SOX12O15370 315 aa21.2■□□□□ 0.98
SFSWAP-206ENST00000537582 ALS2Q96Q42 1657 aa21.2■□□□□ 0.98
SFSWAP-206ENST00000537582 SOS2Q07890 1332 aaPredicted RBP21.2■□□□□ 0.98
SFSWAP-206ENST00000537582 SBNO1A3KN83 1393 aa21.19■□□□□ 0.98
SFSWAP-206ENST00000537582 TNS3Q68CZ2 1445 aa21.18■□□□□ 0.98
SFSWAP-206ENST00000537582 NLRP13Q86W25 1043 aa21.18■□□□□ 0.98
SFSWAP-206ENST00000537582 MRS2Q9HD23 443 aa21.18■□□□□ 0.98
SFSWAP-206ENST00000537582 SPATA31A3Q5VYP0 1347 aa21.17■□□□□ 0.98
SFSWAP-206ENST00000537582 USP54Q70EL1 1684 aa21.16■□□□□ 0.98
SFSWAP-206ENST00000537582 AHDC1Q5TGY3 1603 aaPredicted RBP21.16■□□□□ 0.98
SFSWAP-206ENST00000537582 RRS1Q15050 365 aaKnown RBP21.15■□□□□ 0.98
SFSWAP-206ENST00000537582 MTHFSP49914 203 aa21.14■□□□□ 0.98
SFSWAP-206ENST00000537582 MED1Q15648 1581 aaPredicted RBP21.14■□□□□ 0.97
SFSWAP-206ENST00000537582 EMILIN1Q9Y6C2 1016 aa21.14■□□□□ 0.97
SFSWAP-206ENST00000537582 POLKQ9UBT6 870 aa21.13■□□□□ 0.97
SFSWAP-206ENST00000537582 CABLES1Q8TDN4 633 aa21.12■□□□□ 0.97
SFSWAP-206ENST00000537582 USP19O94966 1318 aa21.12■□□□□ 0.97
SFSWAP-206ENST00000537582 AATKQ6ZMQ8 1374 aa21.12■□□□□ 0.97
SFSWAP-206ENST00000537582 SLIT3O75094 1523 aa21.11■□□□□ 0.97
SFSWAP-206ENST00000537582 PPM1GO15355 546 aaPredicted RBP21.1■□□□□ 0.97
SFSWAP-206ENST00000537582 PHLPP1O60346 1717 aa21.1■□□□□ 0.97
SFSWAP-206ENST00000537582 NFAT5O94916 1531 aa21.1■□□□□ 0.97
SFSWAP-206ENST00000537582 COL16A1Q07092 1604 aaPredicted RBP21.09■□□□□ 0.97
SFSWAP-206ENST00000537582 ARHGEF10O15013 1369 aa21.09■□□□□ 0.97
SFSWAP-206ENST00000537582 MAP3K19Q56UN5 1328 aa21.09■□□□□ 0.97
SFSWAP-206ENST00000537582 PEAK1Q9H792 1746 aa21.09■□□□□ 0.97
SFSWAP-206ENST00000537582 MAP2P11137 1827 aaKnown RBP21.08■□□□□ 0.96
SFSWAP-206ENST00000537582 SMG6Q86US8 1419 aaKnown RBP21.08■□□□□ 0.96
SFSWAP-206ENST00000537582 CRYBG1Q9Y4K1 1723 aa21.07■□□□□ 0.96
SFSWAP-206ENST00000537582 GCP02774 474 aa21.07■□□□□ 0.96
SFSWAP-206ENST00000537582 PHRF1Q9P1Y6 1649 aaKnown RBP21.07■□□□□ 0.96
SFSWAP-206ENST00000537582 COL3A1P02461 1466 aaPredicted RBP21.06■□□□□ 0.96
SFSWAP-206ENST00000537582 PNISRQ8TF01 805 aaKnown RBP21.06■□□□□ 0.96
SFSWAP-206ENST00000537582 FAM9BQ8IZU0 186 aa21.05■□□□□ 0.96
SFSWAP-206ENST00000537582 ZBTB7CA1YPR0 619 aa21.04■□□□□ 0.96
SFSWAP-206ENST00000537582 LRRC59Q96AG4 307 aaKnown RBP21.04■□□□□ 0.96
SFSWAP-206ENST00000537582 ZC3H6P61129 1189 aaKnown RBP21.03■□□□□ 0.96
SFSWAP-206ENST00000537582 KCNH5Q8NCM2 988 aa21.03■□□□□ 0.96
SFSWAP-206ENST00000537582 CDK12Q9NYV4 1490 aaPredicted RBP21.03■□□□□ 0.96
SFSWAP-206ENST00000537582 PNPLA6Q8IY17 1366 aa21.03■□□□□ 0.96
SFSWAP-206ENST00000537582 ABCA3Q99758 1704 aa21.02■□□□□ 0.96
SFSWAP-206ENST00000537582 SHPRHQ149N8 1683 aa21.02■□□□□ 0.96
SFSWAP-206ENST00000537582 LTN1O94822 1766 aa21.01■□□□□ 0.95
SFSWAP-206ENST00000537582 HSP90AB2PQ58FF8 381 aa21.01■□□□□ 0.95
SFSWAP-206ENST00000537582 CFAP53Q96M91 514 aa21.01■□□□□ 0.95
SFSWAP-206ENST00000537582 ARHGEF25Q86VW2 580 aa21■□□□□ 0.95
SFSWAP-206ENST00000537582 AMPHP49418 695 aa20.99■□□□□ 0.95
SFSWAP-206ENST00000537582 YTHDC1Q96MU7 727 aaKnown RBP20.99■□□□□ 0.95
SFSWAP-206ENST00000537582 HOXC9P31274 260 aa20.98■□□□□ 0.95
SFSWAP-206ENST00000537582 INSRP06213 1382 aa20.98■□□□□ 0.95
SFSWAP-206ENST00000537582 HSPA1LP34931 641 aa20.97■□□□□ 0.95
SFSWAP-206ENST00000537582 FLT4P35916 1363 aa20.97■□□□□ 0.95
SFSWAP-206ENST00000537582 COL22A1Q8NFW1 1626 aaPredicted RBP20.97■□□□□ 0.95
SFSWAP-206ENST00000537582 CHRNA2Q15822 529 aa20.97■□□□□ 0.95
SFSWAP-206ENST00000537582 KIAA0232Q92628 1395 aa20.97■□□□□ 0.95
SFSWAP-206ENST00000537582 SENP3-EIF4A1A0A087X0R7 540 aa20.96■□□□□ 0.95
SFSWAP-206ENST00000537582 DIAPH1O60610 1272 aaKnown RBP20.96■□□□□ 0.95
SFSWAP-206ENST00000537582 ADAMTS8Q9UP79 889 aa20.96■□□□□ 0.95
SFSWAP-206ENST00000537582 IL13P35225 146 aa20.95■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 128.6 ms