RNA–Protein interactions for RNA: ENST00000536742.5

CCDC60-203, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CCDC60, Length 886 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-203ENST00000536742 PPP1R18Q6NYC8 613 aa11.87□□□□□ -0.51
CCDC60-203ENST00000536742 BLOC1S3Q6QNY0 202 aa11.87□□□□□ -0.51
CCDC60-203ENST00000536742 PTPRTO14522 1441 aa11.86□□□□□ -0.51
CCDC60-203ENST00000536742 LTBP4Q8N2S1 1624 aa11.86□□□□□ -0.51
CCDC60-203ENST00000536742 RDH13Q8NBN7 331 aa11.86□□□□□ -0.51
CCDC60-203ENST00000536742 NKX2-3Q8TAU0 364 aa11.86□□□□□ -0.51
CCDC60-203ENST00000536742 CFAP43Q8NDM7 1665 aa11.86□□□□□ -0.51
CCDC60-203ENST00000536742 STRCQ7RTU9 1775 aa11.86□□□□□ -0.51
CCDC60-203ENST00000536742 TNIKQ9UKE5 1360 aa11.85□□□□□ -0.51
CCDC60-203ENST00000536742 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.85□□□□□ -0.51
CCDC60-203ENST00000536742 KDM5BQ9UGL1 1544 aa11.85□□□□□ -0.51
CCDC60-203ENST00000536742 TTBK1Q5TCY1 1321 aaPredicted RBP11.85□□□□□ -0.51
CCDC60-203ENST00000536742 NR1I2O75469 434 aa11.83□□□□□ -0.52
CCDC60-203ENST00000536742 USP46P62068 366 aa11.83□□□□□ -0.52
CCDC60-203ENST00000536742 SH3D19Q5HYK7 790 aa11.83□□□□□ -0.52
CCDC60-203ENST00000536742 WRNQ14191 1432 aaPredicted RBP eCLIP11.83□□□□□ -0.52
CCDC60-203ENST00000536742 UACAQ9BZF9 1416 aa11.83□□□□□ -0.52
CCDC60-203ENST00000536742 GCGRP47871 477 aa11.82□□□□□ -0.52
CCDC60-203ENST00000536742 NUTM1Q86Y26 1132 aa11.82□□□□□ -0.52
CCDC60-203ENST00000536742 PREX1Q8TCU6 1659 aa11.81□□□□□ -0.52
CCDC60-203ENST00000536742 CARMIL2Q6F5E8 1435 aa11.8□□□□□ -0.52
CCDC60-203ENST00000536742 GJA5P36382 358 aa11.8□□□□□ -0.52
CCDC60-203ENST00000536742 WDR7Q9Y4E6 1490 aa11.8□□□□□ -0.52
CCDC60-203ENST00000536742 PHLDB1Q86UU1 1377 aa11.79□□□□□ -0.52
CCDC60-203ENST00000536742 SKIV2LQ15477 1246 aaKnown RBP11.79□□□□□ -0.52
CCDC60-203ENST00000536742 PRKD2Q9BZL6 878 aa11.79□□□□□ -0.52
CCDC60-203ENST00000536742 POGZQ7Z3K3 1410 aa11.78□□□□□ -0.52
CCDC60-203ENST00000536742 KDM4AO75164 1064 aa11.78□□□□□ -0.52
CCDC60-203ENST00000536742 HSPA1LP34931 641 aa11.78□□□□□ -0.52
CCDC60-203ENST00000536742 GRIPAP1Q4V328 841 aa11.78□□□□□ -0.52
CCDC60-203ENST00000536742 TBC1D2Q9BYX2 928 aa11.78□□□□□ -0.52
CCDC60-203ENST00000536742 ZCCHC11Q5TAX3 1644 aaKnown RBP11.78□□□□□ -0.52
CCDC60-203ENST00000536742 TUSC1Q2TAM9 212 aa11.77□□□□□ -0.53
CCDC60-203ENST00000536742 SPIRE2Q8WWL2 714 aa11.77□□□□□ -0.53
CCDC60-203ENST00000536742 PCMTD1Q96MG8 357 aaPredicted RBP11.77□□□□□ -0.53
CCDC60-203ENST00000536742 TLL1O43897 1013 aa11.75□□□□□ -0.53
CCDC60-203ENST00000536742 PUS10Q3MIT2 529 aaKnown RBP11.75□□□□□ -0.53
CCDC60-203ENST00000536742 MYSM1Q5VVJ2 828 aa11.75□□□□□ -0.53
CCDC60-203ENST00000536742 SCUBE3Q8IX30 993 aa11.75□□□□□ -0.53
CCDC60-203ENST00000536742 V9GY48 417 aaPredicted RBP11.75□□□□□ -0.53
CCDC60-203ENST00000536742 ADH1BP00325 375 aa11.73□□□□□ -0.53
CCDC60-203ENST00000536742 CLK2P49760 499 aaKnown RBP11.73□□□□□ -0.53
CCDC60-203ENST00000536742 SPTLC1O15269 473 aa11.72□□□□□ -0.53
CCDC60-203ENST00000536742 RAPGEF3O95398 923 aa11.72□□□□□ -0.53
CCDC60-203ENST00000536742 ATP6V1AP38606 617 aa11.72□□□□□ -0.53
CCDC60-203ENST00000536742 TTC37Q6PGP7 1564 aa11.71□□□□□ -0.53
CCDC60-203ENST00000536742 UHRF1BP1Q6BDS2 1440 aa11.71□□□□□ -0.53
CCDC60-203ENST00000536742 FUT2Q10981 343 aa11.71□□□□□ -0.53
CCDC60-203ENST00000536742 RNF223E7ERA6 249 aa11.7□□□□□ -0.54
CCDC60-203ENST00000536742 HOXA2O43364 376 aa11.7□□□□□ -0.54
CCDC60-203ENST00000536742 RIC3Q7Z5B4 369 aa11.7□□□□□ -0.54
CCDC60-203ENST00000536742 FANCAO15360 1455 aa11.7□□□□□ -0.54
CCDC60-203ENST00000536742 S1PR4O95977 384 aa11.69□□□□□ -0.54
CCDC60-203ENST00000536742 LAPTM4AQ15012 233 aa11.69□□□□□ -0.54
CCDC60-203ENST00000536742 RSBN1LQ6PCB5 846 aaPredicted RBP11.69□□□□□ -0.54
CCDC60-203ENST00000536742 SPSB2Q99619 263 aa11.69□□□□□ -0.54
CCDC60-203ENST00000536742 SLC6A16Q9GZN6 736 aa11.69□□□□□ -0.54
CCDC60-203ENST00000536742 GTF3C3Q9Y5Q9 886 aa11.69□□□□□ -0.54
CCDC60-203ENST00000536742 MORN1Q5T089 497 aa11.68□□□□□ -0.54
CCDC60-203ENST00000536742 SETD1BQ9UPS6 1966 aaKnown RBP11.67□□□□□ -0.54
CCDC60-203ENST00000536742 GFRA3O60609 400 aa11.67□□□□□ -0.54
CCDC60-203ENST00000536742 TOM1O60784 492 aa11.67□□□□□ -0.54
CCDC60-203ENST00000536742 PRPF38BQ5VTL8 546 aaKnown RBP11.67□□□□□ -0.54
CCDC60-203ENST00000536742 ERICH6Q7L0X2 663 aa11.67□□□□□ -0.54
CCDC60-203ENST00000536742 ANKLE1Q8NAG6 615 aa11.67□□□□□ -0.54
CCDC60-203ENST00000536742 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.67□□□□□ -0.54
CCDC60-203ENST00000536742 FER1L4A9Z1Z3 1794 aa11.67□□□□□ -0.54
CCDC60-203ENST00000536742 MOXD2PA6NHM9 499 aa11.66□□□□□ -0.54
CCDC60-203ENST00000536742 SLC19A1P41440 591 aa11.66□□□□□ -0.54
CCDC60-203ENST00000536742 PIP4K2BP78356 416 aa11.66□□□□□ -0.54
CCDC60-203ENST00000536742 Q6ZNB5 142 aa11.66□□□□□ -0.54
CCDC60-203ENST00000536742 POLR3EQ9NVU0 708 aa11.65□□□□□ -0.54
CCDC60-203ENST00000536742 RGS17Q9UGC6 210 aaPredicted RBP11.65□□□□□ -0.54
CCDC60-203ENST00000536742 ARHGEF40Q8TER5 1519 aa11.65□□□□□ -0.55
CCDC60-203ENST00000536742 PPEF1O14829 653 aaPredicted RBP11.64□□□□□ -0.55
CCDC60-203ENST00000536742 FMNL1O95466 1100 aaPredicted RBP11.64□□□□□ -0.55
CCDC60-203ENST00000536742 FDX1P10109 184 aa11.64□□□□□ -0.55
CCDC60-203ENST00000536742 SLC27A5Q9Y2P5 690 aa11.64□□□□□ -0.55
CCDC60-203ENST00000536742 Q3C1V9 767 aa11.63□□□□□ -0.55
CCDC60-203ENST00000536742 LIMD1Q9UGP4 676 aa11.63□□□□□ -0.55
CCDC60-203ENST00000536742 SPDYE5A6NIY4 337 aa11.62□□□□□ -0.55
CCDC60-203ENST00000536742 PPP2R2DQ66LE6 453 aa11.62□□□□□ -0.55
CCDC60-203ENST00000536742 ATP1B4Q9UN42 357 aaPredicted RBP11.62□□□□□ -0.55
CCDC60-203ENST00000536742 SALL2Q9Y467 1007 aaPredicted RBP11.62□□□□□ -0.55
CCDC60-203ENST00000536742 NEO1Q92859 1461 aa11.62□□□□□ -0.55
CCDC60-203ENST00000536742 ZNF335Q9H4Z2 1342 aaPredicted RBP11.61□□□□□ -0.55
CCDC60-203ENST00000536742 AKNAQ7Z591 1439 aa11.61□□□□□ -0.55
CCDC60-203ENST00000536742 NDUFV2P19404 249 aa11.61□□□□□ -0.55
CCDC60-203ENST00000536742 MLECQ14165 292 aa11.61□□□□□ -0.55
CCDC60-203ENST00000536742 ZBTB3Q9H5J0 574 aa11.61□□□□□ -0.55
CCDC60-203ENST00000536742 FRMPD1Q5SYB0 1578 aa11.6□□□□□ -0.55
CCDC60-203ENST00000536742 PROCA1Q8NCQ7 364 aaPredicted RBP11.6□□□□□ -0.55
CCDC60-203ENST00000536742 PDZRN3Q9UPQ7 1066 aa11.6□□□□□ -0.55
CCDC60-203ENST00000536742 LILRB3O75022 631 aa11.59□□□□□ -0.55
CCDC60-203ENST00000536742 CEBPAP49715 358 aaPredicted RBP11.59□□□□□ -0.55
CCDC60-203ENST00000536742 NCOA1Q15788 1441 aa11.59□□□□□ -0.55
CCDC60-203ENST00000536742 THAP11Q96EK4 314 aa11.58□□□□□ -0.56
CCDC60-203ENST00000536742 NRG2O14511 850 aaPredicted RBP11.57□□□□□ -0.56
CCDC60-203ENST00000536742 MTMR2Q13614 643 aa11.57□□□□□ -0.56
CCDC60-203ENST00000536742 TMEM259Q4ZIN3 620 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms