RNA–Protein interactions for RNA: ENST00000536297.1

CLPB-207, Transcript of ClpB homolog, mitochondrial AAA ATPase chaperonin, humanhuman

TSL 5

Gene CLPB, Length 479 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPB-207ENST00000536297 TULP4Q9NRJ4 1543 aa12.38□□□□□ -0.43
CLPB-207ENST00000536297 PAK3O75914 559 aaPredicted RBP12.38□□□□□ -0.43
CLPB-207ENST00000536297 PSDA5PKW4 1024 aaPredicted RBP12.37□□□□□ -0.43
CLPB-207ENST00000536297 WASLO00401 505 aaPredicted RBP12.37□□□□□ -0.43
CLPB-207ENST00000536297 FAM182BQ5T319 152 aa12.37□□□□□ -0.43
CLPB-207ENST00000536297 NGDNQ8NEJ9 315 aaKnown RBP12.37□□□□□ -0.43
CLPB-207ENST00000536297 SRCAPQ6ZRS2 3230 aa12.37□□□□□ -0.43
CLPB-207ENST00000536297 CRYBG1Q9Y4K1 1723 aa12.37□□□□□ -0.43
CLPB-207ENST00000536297 EIF3AQ14152 1382 aaKnown RBP12.36□□□□□ -0.43
CLPB-207ENST00000536297 BAG6P46379 1132 aa12.35□□□□□ -0.43
CLPB-207ENST00000536297 ARHGEF28Q8N1W1 1705 aaKnown RBP12.34□□□□□ -0.43
CLPB-207ENST00000536297 PRDM11Q9NQV5 511 aa12.34□□□□□ -0.43
CLPB-207ENST00000536297 SPATA31A5Q5VU36 1347 aa12.34□□□□□ -0.43
CLPB-207ENST00000536297 SPATA31A7Q8IWB4 1347 aa12.34□□□□□ -0.43
CLPB-207ENST00000536297 RGPD1P0DJD0 1748 aa12.34□□□□□ -0.43
CLPB-207ENST00000536297 LRP5O75197 1615 aa12.33□□□□□ -0.43
CLPB-207ENST00000536297 EN1Q05925 392 aaPredicted RBP12.33□□□□□ -0.44
CLPB-207ENST00000536297 CHRNA2Q15822 529 aa12.33□□□□□ -0.44
CLPB-207ENST00000536297 NUTM2GQ5VZR2 741 aa12.33□□□□□ -0.44
CLPB-207ENST00000536297 ITSN1Q15811 1721 aa12.33□□□□□ -0.44
CLPB-207ENST00000536297 THSD7AQ9UPZ6 1657 aa12.32□□□□□ -0.44
CLPB-207ENST00000536297 NUDT16Q96DE0 195 aaKnown RBP12.32□□□□□ -0.44
CLPB-207ENST00000536297 ATP7BP35670 1465 aa12.32□□□□□ -0.44
CLPB-207ENST00000536297 KIAA0232Q92628 1395 aa12.31□□□□□ -0.44
CLPB-207ENST00000536297 PHRF1Q9P1Y6 1649 aaKnown RBP12.31□□□□□ -0.44
CLPB-207ENST00000536297 HRCP23327 699 aa12.31□□□□□ -0.44
CLPB-207ENST00000536297 STRN4Q9NRL3 753 aa12.31□□□□□ -0.44
CLPB-207ENST00000536297 TNS1Q9HBL0 1735 aaKnown RBP12.31□□□□□ -0.44
CLPB-207ENST00000536297 ZC3H6P61129 1189 aaKnown RBP12.3□□□□□ -0.44
CLPB-207ENST00000536297 CDK19Q9BWU1 502 aa12.3□□□□□ -0.44
CLPB-207ENST00000536297 R3HDM1Q15032 1099 aaKnown RBP12.29□□□□□ -0.44
CLPB-207ENST00000536297 USP35Q9P2H5 1018 aa12.29□□□□□ -0.44
CLPB-207ENST00000536297 SPATA31A1Q5TZJ5 1347 aa12.29□□□□□ -0.44
CLPB-207ENST00000536297 EZH2Q15910 746 aaKnown RBP12.28□□□□□ -0.44
CLPB-207ENST00000536297 STAC3Q96MF2 364 aa12.28□□□□□ -0.44
CLPB-207ENST00000536297 ACEP12821 1306 aa12.28□□□□□ -0.44
CLPB-207ENST00000536297 TOPAZ1Q8N9V7 1692 aa12.28□□□□□ -0.44
CLPB-207ENST00000536297 TRIM37O94972 964 aa12.27□□□□□ -0.45
CLPB-207ENST00000536297 EVA1CP58658 441 aa12.26□□□□□ -0.45
CLPB-207ENST00000536297 NBPF8Q3BBV2 869 aa12.26□□□□□ -0.45
CLPB-207ENST00000536297 POLR3AO14802 1390 aaPredicted RBP12.26□□□□□ -0.45
CLPB-207ENST00000536297 DISP2A7MBM2 1401 aa12.26□□□□□ -0.45
CLPB-207ENST00000536297 FAM196AQ6ZSG2 479 aa12.25□□□□□ -0.45
CLPB-207ENST00000536297 SSH2Q76I76 1423 aa12.25□□□□□ -0.45
CLPB-207ENST00000536297 NRKQ7Z2Y5 1582 aa12.25□□□□□ -0.45
CLPB-207ENST00000536297 APBA3O96018 575 aa12.24□□□□□ -0.45
CLPB-207ENST00000536297 NBPF1Q3BBV0 1214 aa12.24□□□□□ -0.45
CLPB-207ENST00000536297 LARP1Q6PKG0 1096 aaKnown RBP12.24□□□□□ -0.45
CLPB-207ENST00000536297 ABTB2Q8N961 1025 aa12.24□□□□□ -0.45
CLPB-207ENST00000536297 CAMKK2Q96RR4 588 aa12.24□□□□□ -0.45
CLPB-207ENST00000536297 CCDC61Q9Y6R9 512 aa12.24□□□□□ -0.45
CLPB-207ENST00000536297 CAMTA1Q9Y6Y1 1673 aa12.24□□□□□ -0.45
CLPB-207ENST00000536297 KIAA1210Q9ULL0 1709 aa12.23□□□□□ -0.45
CLPB-207ENST00000536297 PLEKHG3A1L390 1219 aa12.23□□□□□ -0.45
CLPB-207ENST00000536297 PDE3BQ13370 1112 aa12.23□□□□□ -0.45
CLPB-207ENST00000536297 LMO7Q8WWI1 1683 aa12.22□□□□□ -0.45
CLPB-207ENST00000536297 SRPK2P78362 688 aaKnown RBP12.22□□□□□ -0.45
CLPB-207ENST00000536297 BARGINQ6ZT62 677 aa12.22□□□□□ -0.45
CLPB-207ENST00000536297 PPIP5K1Q6PFW1 1433 aa12.21□□□□□ -0.45
CLPB-207ENST00000536297 ZBTB7CA1YPR0 619 aa12.21□□□□□ -0.45
CLPB-207ENST00000536297 TCP11L2Q8N4U5 519 aa12.21□□□□□ -0.45
CLPB-207ENST00000536297 CABP2Q9NPB3 220 aa12.21□□□□□ -0.45
CLPB-207ENST00000536297 CPDO75976 1380 aa12.2□□□□□ -0.46
CLPB-207ENST00000536297 RREB1Q92766 1687 aa12.2□□□□□ -0.46
CLPB-207ENST00000536297 USP19O94966 1318 aa12.2□□□□□ -0.46
CLPB-207ENST00000536297 GCP02774 474 aa12.2□□□□□ -0.46
CLPB-207ENST00000536297 NUP188Q5SRE5 1749 aa12.2□□□□□ -0.46
CLPB-207ENST00000536297 CENPJQ9HC77 1338 aaPredicted RBP12.19□□□□□ -0.46
CLPB-207ENST00000536297 NLRP13Q86W25 1043 aa12.19□□□□□ -0.46
CLPB-207ENST00000536297 QRICH2Q9H0J4 1663 aa12.19□□□□□ -0.46
CLPB-207ENST00000536297 PARD3Q8TEW0 1356 aa12.18□□□□□ -0.46
CLPB-207ENST00000536297 COL5A2P05997 1499 aaPredicted RBP12.18□□□□□ -0.46
CLPB-207ENST00000536297 PARP4Q9UKK3 1724 aaKnown RBP12.17□□□□□ -0.46
CLPB-207ENST00000536297 CABP1Q9NZU7 370 aa12.17□□□□□ -0.46
CLPB-207ENST00000536297 THRAP3Q9Y2W1 955 aaKnown RBP12.17□□□□□ -0.46
CLPB-207ENST00000536297 NLRP6P59044 892 aa12.16□□□□□ -0.46
CLPB-207ENST00000536297 NBPF14Q5TI25 921 aa12.16□□□□□ -0.46
CLPB-207ENST00000536297 USP6P35125 1406 aa12.15□□□□□ -0.46
CLPB-207ENST00000536297 CRB1P82279 1406 aa12.15□□□□□ -0.46
CLPB-207ENST00000536297 SLIT3O75094 1523 aa12.14□□□□□ -0.47
CLPB-207ENST00000536297 LRRC37A3O60309 1634 aa12.14□□□□□ -0.47
CLPB-207ENST00000536297 PEAK1Q9H792 1746 aa12.14□□□□□ -0.47
CLPB-207ENST00000536297 PIK3C2AO00443 1686 aa12.13□□□□□ -0.47
CLPB-207ENST00000536297 TOM1L2Q6ZVM7 507 aa12.13□□□□□ -0.47
CLPB-207ENST00000536297 BRD4O60885 1362 aaPredicted RBP12.13□□□□□ -0.47
CLPB-207ENST00000536297 AATKQ6ZMQ8 1374 aa12.13□□□□□ -0.47
CLPB-207ENST00000536297 COL18A1P39060 1754 aa12.13□□□□□ -0.47
CLPB-207ENST00000536297 OVOS2A0A0G2JMS6 1433 aa12.12□□□□□ -0.47
CLPB-207ENST00000536297 OVOS2A0A0J9YW53 1432 aa12.12□□□□□ -0.47
CLPB-207ENST00000536297 OVOS2Q6IE36 1432 aa12.12□□□□□ -0.47
CLPB-207ENST00000536297 SBF2Q86WG5 1849 aa12.12□□□□□ -0.47
CLPB-207ENST00000536297 SOX12O15370 315 aa12.12□□□□□ -0.47
CLPB-207ENST00000536297 DDB1Q16531 1140 aa12.12□□□□□ -0.47
CLPB-207ENST00000536297 PTF1AQ7RTS3 328 aa12.12□□□□□ -0.47
CLPB-207ENST00000536297 CCER1Q8TC90 406 aaPredicted RBP12.12□□□□□ -0.47
CLPB-207ENST00000536297 AXIN2Q9Y2T1 843 aa12.12□□□□□ -0.47
CLPB-207ENST00000536297 WNK3Q9BYP7 1800 aa12.11□□□□□ -0.47
CLPB-207ENST00000536297 RGPD5Q99666 1765 aa12.11□□□□□ -0.47
CLPB-207ENST00000536297 L3MBTL2Q969R5 705 aa12.11□□□□□ -0.47
CLPB-207ENST00000536297 SPON1Q9HCB6 807 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms