RNA–Protein interactions for RNA: ENST00000535897.1

CHFR-211, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 4

Gene CHFR, Length 587 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-211ENST00000535897 EN1Q05925 392 aaPredicted RBP11.86□□□□□ -0.51
CHFR-211ENST00000535897 NGDNQ8NEJ9 315 aaKnown RBP11.86□□□□□ -0.51
CHFR-211ENST00000535897 PRDM11Q9NQV5 511 aa11.86□□□□□ -0.51
CHFR-211ENST00000535897 ACIN1Q9UKV3 1341 aaKnown RBP11.86□□□□□ -0.51
CHFR-211ENST00000535897 HRCP23327 699 aa11.85□□□□□ -0.51
CHFR-211ENST00000535897 TULP4Q9NRJ4 1543 aa11.85□□□□□ -0.51
CHFR-211ENST00000535897 R3HDM1Q15032 1099 aaKnown RBP11.84□□□□□ -0.51
CHFR-211ENST00000535897 KDM2AQ9Y2K7 1162 aa11.84□□□□□ -0.51
CHFR-211ENST00000535897 SPATA31A5Q5VU36 1347 aa11.84□□□□□ -0.51
CHFR-211ENST00000535897 SPATA31A7Q8IWB4 1347 aa11.84□□□□□ -0.51
CHFR-211ENST00000535897 PRR36Q9H6K5 1346 aa11.84□□□□□ -0.51
CHFR-211ENST00000535897 ADGRB1O14514 1584 aa11.84□□□□□ -0.51
CHFR-211ENST00000535897 WASLO00401 505 aaPredicted RBP11.83□□□□□ -0.52
CHFR-211ENST00000535897 ITSN1Q15811 1721 aa11.83□□□□□ -0.52
CHFR-211ENST00000535897 TNS1Q9HBL0 1735 aaKnown RBP11.83□□□□□ -0.52
CHFR-211ENST00000535897 CRYBG1Q9Y4K1 1723 aa11.83□□□□□ -0.52
CHFR-211ENST00000535897 THSD7AQ9UPZ6 1657 aa11.82□□□□□ -0.52
CHFR-211ENST00000535897 DCAF11Q8TEB1 546 aa11.82□□□□□ -0.52
CHFR-211ENST00000535897 STRN4Q9NRL3 753 aa11.82□□□□□ -0.52
CHFR-211ENST00000535897 CHRNA2Q15822 529 aa11.81□□□□□ -0.52
CHFR-211ENST00000535897 KIAA0232Q92628 1395 aa11.8□□□□□ -0.52
CHFR-211ENST00000535897 PHRF1Q9P1Y6 1649 aaKnown RBP11.8□□□□□ -0.52
CHFR-211ENST00000535897 EZH2Q15910 746 aaKnown RBP11.8□□□□□ -0.52
CHFR-211ENST00000535897 USP35Q9P2H5 1018 aa11.8□□□□□ -0.52
CHFR-211ENST00000535897 RAB3GAP2Q9H2M9 1393 aa11.79□□□□□ -0.52
CHFR-211ENST00000535897 TRIM37O94972 964 aa11.79□□□□□ -0.52
CHFR-211ENST00000535897 ZC3H6P61129 1189 aaKnown RBP11.79□□□□□ -0.52
CHFR-211ENST00000535897 NUTM2GQ5VZR2 741 aa11.79□□□□□ -0.52
CHFR-211ENST00000535897 SPATA31A1Q5TZJ5 1347 aa11.79□□□□□ -0.52
CHFR-211ENST00000535897 DISP2A7MBM2 1401 aa11.78□□□□□ -0.52
CHFR-211ENST00000535897 ARHGEF28Q8N1W1 1705 aaKnown RBP11.78□□□□□ -0.52
CHFR-211ENST00000535897 APBA3O96018 575 aa11.78□□□□□ -0.52
CHFR-211ENST00000535897 EVA1CP58658 441 aa11.78□□□□□ -0.52
CHFR-211ENST00000535897 FAM196AQ6ZSG2 479 aa11.78□□□□□ -0.52
CHFR-211ENST00000535897 NUDT16Q96DE0 195 aaKnown RBP11.78□□□□□ -0.52
CHFR-211ENST00000535897 ATP7BP35670 1465 aa11.77□□□□□ -0.52
CHFR-211ENST00000535897 PDE3BQ13370 1112 aa11.77□□□□□ -0.53
CHFR-211ENST00000535897 CAMKK2Q96RR4 588 aa11.75□□□□□ -0.53
CHFR-211ENST00000535897 CDK19Q9BWU1 502 aa11.75□□□□□ -0.53
CHFR-211ENST00000535897 PARD3Q8TEW0 1356 aa11.75□□□□□ -0.53
CHFR-211ENST00000535897 ABTB2Q8N961 1025 aa11.74□□□□□ -0.53
CHFR-211ENST00000535897 ACEP12821 1306 aa11.74□□□□□ -0.53
CHFR-211ENST00000535897 SSH2Q76I76 1423 aa11.74□□□□□ -0.53
CHFR-211ENST00000535897 NRKQ7Z2Y5 1582 aa11.74□□□□□ -0.53
CHFR-211ENST00000535897 NBPF8Q3BBV2 869 aa11.73□□□□□ -0.53
CHFR-211ENST00000535897 NBPF14Q5TI25 921 aa11.73□□□□□ -0.53
CHFR-211ENST00000535897 LARP1Q6PKG0 1096 aaKnown RBP11.73□□□□□ -0.53
CHFR-211ENST00000535897 TOPAZ1Q8N9V7 1692 aa11.73□□□□□ -0.53
CHFR-211ENST00000535897 STAC3Q96MF2 364 aa11.73□□□□□ -0.53
CHFR-211ENST00000535897 NUP188Q5SRE5 1749 aa11.72□□□□□ -0.53
CHFR-211ENST00000535897 RREB1Q92766 1687 aa11.72□□□□□ -0.53
CHFR-211ENST00000535897 ZBTB7CA1YPR0 619 aa11.72□□□□□ -0.53
CHFR-211ENST00000535897 BARGINQ6ZT62 677 aa11.72□□□□□ -0.53
CHFR-211ENST00000535897 TCP11L2Q8N4U5 519 aa11.72□□□□□ -0.53
CHFR-211ENST00000535897 PPP1R1BQ9UD71 204 aaPredicted RBP11.72□□□□□ -0.53
CHFR-211ENST00000535897 CAMTA1Q9Y6Y1 1673 aa11.71□□□□□ -0.53
CHFR-211ENST00000535897 POLR3AO14802 1390 aaPredicted RBP11.71□□□□□ -0.53
CHFR-211ENST00000535897 CCDC61Q9Y6R9 512 aa11.71□□□□□ -0.53
CHFR-211ENST00000535897 SRPK2P78362 688 aaKnown RBP11.7□□□□□ -0.54
CHFR-211ENST00000535897 CPDO75976 1380 aa11.69□□□□□ -0.54
CHFR-211ENST00000535897 LMO7Q8WWI1 1683 aa11.69□□□□□ -0.54
CHFR-211ENST00000535897 DCAF8L1A6NGE4 600 aa11.69□□□□□ -0.54
CHFR-211ENST00000535897 NLRP13Q86W25 1043 aa11.69□□□□□ -0.54
CHFR-211ENST00000535897 PARP4Q9UKK3 1724 aaKnown RBP11.69□□□□□ -0.54
CHFR-211ENST00000535897 PPIP5K1Q6PFW1 1433 aa11.69□□□□□ -0.54
CHFR-211ENST00000535897 PLEKHG3A1L390 1219 aa11.68□□□□□ -0.54
CHFR-211ENST00000535897 YY1P25490 414 aa11.68□□□□□ -0.54
CHFR-211ENST00000535897 THRAP3Q9Y2W1 955 aaKnown RBP11.68□□□□□ -0.54
CHFR-211ENST00000535897 USP19O94966 1318 aa11.67□□□□□ -0.54
CHFR-211ENST00000535897 KIAA1210Q9ULL0 1709 aa11.67□□□□□ -0.54
CHFR-211ENST00000535897 GCP02774 474 aa11.67□□□□□ -0.54
CHFR-211ENST00000535897 SPON1Q9HCB6 807 aa11.67□□□□□ -0.54
CHFR-211ENST00000535897 COL5A2P05997 1499 aaPredicted RBP11.67□□□□□ -0.54
CHFR-211ENST00000535897 OVOS2A0A0G2JMS6 1433 aa11.67□□□□□ -0.54
CHFR-211ENST00000535897 OVOS2A0A0J9YW53 1432 aa11.67□□□□□ -0.54
CHFR-211ENST00000535897 CRB1P82279 1406 aa11.67□□□□□ -0.54
CHFR-211ENST00000535897 OVOS2Q6IE36 1432 aa11.67□□□□□ -0.54
CHFR-211ENST00000535897 C11orf95C9JLR9 678 aaPredicted RBP11.65□□□□□ -0.54
CHFR-211ENST00000535897 KCNQ2O43526 872 aa11.65□□□□□ -0.54
CHFR-211ENST00000535897 NLRP6P59044 892 aa11.65□□□□□ -0.54
CHFR-211ENST00000535897 TOM1L2Q6ZVM7 507 aa11.65□□□□□ -0.54
CHFR-211ENST00000535897 CABP2Q9NPB3 220 aa11.65□□□□□ -0.54
CHFR-211ENST00000535897 QRICH2Q9H0J4 1663 aa11.65□□□□□ -0.55
CHFR-211ENST00000535897 LRRC37A3O60309 1634 aa11.64□□□□□ -0.55
CHFR-211ENST00000535897 CENPJQ9HC77 1338 aaPredicted RBP11.64□□□□□ -0.55
CHFR-211ENST00000535897 DDB1Q16531 1140 aa11.64□□□□□ -0.55
CHFR-211ENST00000535897 NBPF1Q3BBV0 1214 aa11.64□□□□□ -0.55
CHFR-211ENST00000535897 RGPD3A6NKT7 1758 aaPredicted RBP11.63□□□□□ -0.55
CHFR-211ENST00000535897 RGPD4Q7Z3J3 1758 aa11.63□□□□□ -0.55
CHFR-211ENST00000535897 NINLQ9Y2I6 1382 aa11.63□□□□□ -0.55
CHFR-211ENST00000535897 PEAK1Q9H792 1746 aa11.63□□□□□ -0.55
CHFR-211ENST00000535897 BCL11BQ9C0K0 894 aaPredicted RBP11.62□□□□□ -0.55
CHFR-211ENST00000535897 CABP1Q9NZU7 370 aa11.62□□□□□ -0.55
CHFR-211ENST00000535897 BRD4O60885 1362 aaPredicted RBP11.62□□□□□ -0.55
CHFR-211ENST00000535897 AATKQ6ZMQ8 1374 aa11.62□□□□□ -0.55
CHFR-211ENST00000535897 SBF2Q86WG5 1849 aa11.62□□□□□ -0.55
CHFR-211ENST00000535897 AKAP12Q02952 1782 aa11.62□□□□□ -0.55
CHFR-211ENST00000535897 USP6P35125 1406 aa11.61□□□□□ -0.55
CHFR-211ENST00000535897 SOX12O15370 315 aa11.61□□□□□ -0.55
CHFR-211ENST00000535897 SLIT3O75094 1523 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms