RNA–Protein interactions for RNA: ENST00000535887.1

C12orf4-204, Transcript of chromosome 12 open reading frame 4, humanhuman

TSL 3

Gene C12orf4, Length 568 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf4-204ENST00000535887 LILRB3O75022 631 aa12.16□□□□□ -0.46
C12orf4-204ENST00000535887 INSM1Q01101 510 aaPredicted RBP12.16□□□□□ -0.46
C12orf4-204ENST00000535887 HRCP23327 699 aa12.15□□□□□ -0.46
C12orf4-204ENST00000535887 RC3H1Q5TC82 1133 aaKnown RBP12.15□□□□□ -0.46
C12orf4-204ENST00000535887 IL27Q8NEV9 243 aa12.14□□□□□ -0.47
C12orf4-204ENST00000535887 SENP2Q9HC62 589 aa12.14□□□□□ -0.47
C12orf4-204ENST00000535887 POLR3EQ9NVU0 708 aa12.14□□□□□ -0.47
C12orf4-204ENST00000535887 JUNDP17535 347 aa12.13□□□□□ -0.47
C12orf4-204ENST00000535887 CCDC24Q8N4L8 307 aa12.13□□□□□ -0.47
C12orf4-204ENST00000535887 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.13□□□□□ -0.47
C12orf4-204ENST00000535887 PRR7Q8TB68 274 aa12.12□□□□□ -0.47
C12orf4-204ENST00000535887 QPCTQ16769 361 aa12.09□□□□□ -0.47
C12orf4-204ENST00000535887 PPP2R2DQ66LE6 453 aa12.09□□□□□ -0.47
C12orf4-204ENST00000535887 WNT7BP56706 349 aa12.08□□□□□ -0.48
C12orf4-204ENST00000535887 CABLES1Q8TDN4 633 aa12.08□□□□□ -0.48
C12orf4-204ENST00000535887 NUTM2BA6NNL0 878 aaPredicted RBP12.07□□□□□ -0.48
C12orf4-204ENST00000535887 NUTM2EB1AL46 878 aaPredicted RBP12.07□□□□□ -0.48
C12orf4-204ENST00000535887 CFAP99D6REC4 459 aa12.07□□□□□ -0.48
C12orf4-204ENST00000535887 ALDH1A1P00352 501 aa12.07□□□□□ -0.48
C12orf4-204ENST00000535887 PTPRNQ16849 979 aa12.07□□□□□ -0.48
C12orf4-204ENST00000535887 NUTM2DQ5VT03 806 aaPredicted RBP12.07□□□□□ -0.48
C12orf4-204ENST00000535887 NUTM2AQ8IVF1 878 aaPredicted RBP12.07□□□□□ -0.48
C12orf4-204ENST00000535887 PROCA1Q8NCQ7 364 aaPredicted RBP12.07□□□□□ -0.48
C12orf4-204ENST00000535887 KIFC2Q96AC6 838 aa12.07□□□□□ -0.48
C12orf4-204ENST00000535887 CSPP1Q1MSJ5 1256 aa12.06□□□□□ -0.48
C12orf4-204ENST00000535887 PTCRAQ6ISU1 281 aaPredicted RBP12.06□□□□□ -0.48
C12orf4-204ENST00000535887 LYPD8Q6UX82 237 aa12.06□□□□□ -0.48
C12orf4-204ENST00000535887 LORP23490 312 aaPredicted RBP12.05□□□□□ -0.48
C12orf4-204ENST00000535887 RTL5Q5HYW3 569 aaPredicted RBP12.05□□□□□ -0.48
C12orf4-204ENST00000535887 PCMTD1Q96MG8 357 aaPredicted RBP12.05□□□□□ -0.48
C12orf4-204ENST00000535887 SIAH2O43255 324 aa12.04□□□□□ -0.48
C12orf4-204ENST00000535887 BMP1P13497 986 aa12.04□□□□□ -0.48
C12orf4-204ENST00000535887 TRIM46Q7Z4K8 759 aa12.04□□□□□ -0.48
C12orf4-204ENST00000535887 EVA1BQ9NVM1 165 aa12.04□□□□□ -0.48
C12orf4-204ENST00000535887 NUDT12Q9BQG2 462 aa12.03□□□□□ -0.48
C12orf4-204ENST00000535887 CCNYL3P0C7X3 344 aa12.02□□□□□ -0.49
C12orf4-204ENST00000535887 GMPRP36959 345 aa12.01□□□□□ -0.49
C12orf4-204ENST00000535887 HELBQ8NG08 1087 aaPredicted RBP12□□□□□ -0.49
C12orf4-204ENST00000535887 NXF1Q9UBU9 619 aaKnown RBP12□□□□□ -0.49
C12orf4-204ENST00000535887 VEGFBP49765 207 aa11.99□□□□□ -0.49
C12orf4-204ENST00000535887 KCNH2Q12809 1159 aa11.98□□□□□ -0.49
C12orf4-204ENST00000535887 FBXO31Q5XUX0 539 aaPredicted RBP11.97□□□□□ -0.49
C12orf4-204ENST00000535887 CAPN5O15484 640 aaPredicted RBP11.96□□□□□ -0.49
C12orf4-204ENST00000535887 EHBP1Q8NDI1 1231 aa11.96□□□□□ -0.49
C12orf4-204ENST00000535887 SLC16A10Q8TF71 515 aa11.96□□□□□ -0.49
C12orf4-204ENST00000535887 F12P00748 615 aaPredicted RBP11.95□□□□□ -0.5
C12orf4-204ENST00000535887 SH3BP2P78314 561 aa11.95□□□□□ -0.5
C12orf4-204ENST00000535887 TMEM259Q4ZIN3 620 aa11.95□□□□□ -0.5
C12orf4-204ENST00000535887 ATP1B4Q9UN42 357 aaPredicted RBP11.95□□□□□ -0.5
C12orf4-204ENST00000535887 PER1O15534 1290 aaPredicted RBP11.94□□□□□ -0.5
C12orf4-204ENST00000535887 RFC5P40937 340 aa11.94□□□□□ -0.5
C12orf4-204ENST00000535887 ERBB4Q15303 1308 aa11.93□□□□□ -0.5
C12orf4-204ENST00000535887 CTDSPL2Q05D32 466 aa11.93□□□□□ -0.5
C12orf4-204ENST00000535887 WASF2Q9Y6W5 498 aa11.92□□□□□ -0.5
C12orf4-204ENST00000535887 H3BM21 787 aa11.91□□□□□ -0.5
C12orf4-204ENST00000535887 ZSCAN1Q8NBB4 408 aa11.91□□□□□ -0.5
C12orf4-204ENST00000535887 TSC1Q92574 1164 aa11.9□□□□□ -0.5
C12orf4-204ENST00000535887 IRF7Q92985 503 aa11.9□□□□□ -0.5
C12orf4-204ENST00000535887 UNC93B1Q9H1C4 597 aa11.9□□□□□ -0.5
C12orf4-204ENST00000535887 NPAS3Q8IXF0 933 aa11.89□□□□□ -0.51
C12orf4-204ENST00000535887 ZFP42Q96MM3 310 aa11.89□□□□□ -0.51
C12orf4-204ENST00000535887 CTHP32929 405 aa11.88□□□□□ -0.51
C12orf4-204ENST00000535887 BANK1Q8NDB2 785 aa11.88□□□□□ -0.51
C12orf4-204ENST00000535887 TLL2Q9Y6L7 1015 aa11.88□□□□□ -0.51
C12orf4-204ENST00000535887 ARMC2Q8NEN0 867 aa11.87□□□□□ -0.51
C12orf4-204ENST00000535887 SOCS7O14512 581 aa11.86□□□□□ -0.51
C12orf4-204ENST00000535887 AP1G2O75843 785 aa11.86□□□□□ -0.51
C12orf4-204ENST00000535887 LINC01559Q495D7 138 aa11.86□□□□□ -0.51
C12orf4-204ENST00000535887 FAM181BA6NEQ2 426 aa11.85□□□□□ -0.51
C12orf4-204ENST00000535887 BAP1Q92560 729 aa11.85□□□□□ -0.51
C12orf4-204ENST00000535887 MAP10Q9P2G4 905 aa11.85□□□□□ -0.51
C12orf4-204ENST00000535887 TMEM132AQ24JP5 1023 aa11.84□□□□□ -0.51
C12orf4-204ENST00000535887 LRRN4Q8WUT4 740 aa11.83□□□□□ -0.52
C12orf4-204ENST00000535887 GPKOWQ92917 476 aaPredicted RBP eCLIP11.83□□□□□ -0.52
C12orf4-204ENST00000535887 USP17L8P0C7I0 530 aa11.82□□□□□ -0.52
C12orf4-204ENST00000535887 ZNF511Q8NB15 262 aa11.82□□□□□ -0.52
C12orf4-204ENST00000535887 SOBPA7XYQ1 873 aa11.81□□□□□ -0.52
C12orf4-204ENST00000535887 LOC100996750A0A140TA64 210 aa11.8□□□□□ -0.52
C12orf4-204ENST00000535887 NNTQ13423 1086 aa11.8□□□□□ -0.52
C12orf4-204ENST00000535887 KRTAP4-6Q9BYQ5 205 aa11.8□□□□□ -0.52
C12orf4-204ENST00000535887 ZC3H4Q9UPT8 1303 aaKnown RBP11.8□□□□□ -0.52
C12orf4-204ENST00000535887 MRPL14Q6P1L8 145 aaKnown RBP11.79□□□□□ -0.52
C12orf4-204ENST00000535887 TIMP2P16035 220 aa11.78□□□□□ -0.52
C12orf4-204ENST00000535887 NBPF14Q5TI25 921 aa11.78□□□□□ -0.52
C12orf4-204ENST00000535887 MPNDQ8N594 471 aa11.78□□□□□ -0.52
C12orf4-204ENST00000535887 PURBQ96QR8 312 aaKnown RBP11.78□□□□□ -0.52
C12orf4-204ENST00000535887 VARSP26640 1264 aaKnown RBP11.77□□□□□ -0.53
C12orf4-204ENST00000535887 KLF16Q9BXK1 252 aaPredicted RBP11.77□□□□□ -0.53
C12orf4-204ENST00000535887 NR6A1Q15406 480 aa11.76□□□□□ -0.53
C12orf4-204ENST00000535887 PDXDC2PQ6P474 469 aa11.76□□□□□ -0.53
C12orf4-204ENST00000535887 PNMA1Q8ND90 353 aa11.76□□□□□ -0.53
C12orf4-204ENST00000535887 FKBPLQ9UIM3 349 aa11.76□□□□□ -0.53
C12orf4-204ENST00000535887 BPHLQ86WA6 291 aaPredicted RBP11.75□□□□□ -0.53
C12orf4-204ENST00000535887 HMX1Q9NP08 348 aaPredicted RBP11.75□□□□□ -0.53
C12orf4-204ENST00000535887 WDR4P57081 412 aaKnown RBP11.74□□□□□ -0.53
C12orf4-204ENST00000535887 SH3RF1Q7Z6J0 888 aa11.74□□□□□ -0.53
C12orf4-204ENST00000535887 TRIM34Q9BYJ4 488 aa11.74□□□□□ -0.53
C12orf4-204ENST00000535887 GPSM3Q9Y4H4 160 aa11.74□□□□□ -0.53
C12orf4-204ENST00000535887 SH3BP5LQ7L8J4 393 aa11.73□□□□□ -0.53
C12orf4-204ENST00000535887 GJD4Q96KN9 370 aaPredicted RBP11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms