RNA–Protein interactions for RNA: ENST00000535689.5

SNHG1-202, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 550 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-202ENST00000535689 CCDC125Q86Z20 511 aa6.11□□□□□ -1.43
SNHG1-202ENST00000535689 SYMPKQ92797 1274 aaKnown RBP6.11□□□□□ -1.43
SNHG1-202ENST00000535689 ARXQ96QS3 562 aa6.11□□□□□ -1.43
SNHG1-202ENST00000535689 GDPD2Q9HCC8 539 aa6.11□□□□□ -1.43
SNHG1-202ENST00000535689 CLUAP1Q96AJ1 413 aa6.1□□□□□ -1.43
SNHG1-202ENST00000535689 FKBPLQ9UIM3 349 aa6.1□□□□□ -1.43
SNHG1-202ENST00000535689 SEMA3FQ13275 785 aa6.09□□□□□ -1.43
SNHG1-202ENST00000535689 PDXDC2PQ6P474 469 aa6.09□□□□□ -1.43
SNHG1-202ENST00000535689 SUPT5HO00267 1087 aaKnown RBP6.08□□□□□ -1.44
SNHG1-202ENST00000535689 CCDC24Q8N4L8 307 aa6.08□□□□□ -1.44
SNHG1-202ENST00000535689 LRRN4Q8WUT4 740 aa6.08□□□□□ -1.44
SNHG1-202ENST00000535689 CALR3Q96L12 384 aaKnown RBP6.08□□□□□ -1.44
SNHG1-202ENST00000535689 CDV3Q9UKY7 258 aaKnown RBP6.08□□□□□ -1.44
SNHG1-202ENST00000535689 ZBBXA8MT70 800 aa6.07□□□□□ -1.44
SNHG1-202ENST00000535689 RGS20O76081 388 aa6.07□□□□□ -1.44
SNHG1-202ENST00000535689 NR1H3Q13133 447 aa6.07□□□□□ -1.44
SNHG1-202ENST00000535689 NR6A1Q15406 480 aa6.07□□□□□ -1.44
SNHG1-202ENST00000535689 PPP1R18Q6NYC8 613 aa6.07□□□□□ -1.44
SNHG1-202ENST00000535689 FNBP4Q8N3X1 1017 aaPredicted RBP6.07□□□□□ -1.44
SNHG1-202ENST00000535689 GJD4Q96KN9 370 aaPredicted RBP6.07□□□□□ -1.44
SNHG1-202ENST00000535689 TBC1D2BQ9UPU7 963 aa6.07□□□□□ -1.44
SNHG1-202ENST00000535689 ACIN1Q9UKV3 1341 aaKnown RBP6.06□□□□□ -1.44
SNHG1-202ENST00000535689 PPEF1O14829 653 aaPredicted RBP6.06□□□□□ -1.44
SNHG1-202ENST00000535689 CD2BP2O95400 341 aaKnown RBP6.06□□□□□ -1.44
SNHG1-202ENST00000535689 F12P00748 615 aaPredicted RBP6.06□□□□□ -1.44
SNHG1-202ENST00000535689 ZBTB33Q86T24 672 aa6.06□□□□□ -1.44
SNHG1-202ENST00000535689 BPHLQ86WA6 291 aaPredicted RBP6.06□□□□□ -1.44
SNHG1-202ENST00000535689 HOMEZQ8IX15 550 aa6.06□□□□□ -1.44
SNHG1-202ENST00000535689 FAM160A2Q8N612 972 aaPredicted RBP6.06□□□□□ -1.44
SNHG1-202ENST00000535689 ANKLE1Q8NAG6 615 aa6.06□□□□□ -1.44
SNHG1-202ENST00000535689 AGERQ15109 404 aa6.05□□□□□ -1.44
SNHG1-202ENST00000535689 RNF20Q5VTR2 975 aa6.05□□□□□ -1.44
SNHG1-202ENST00000535689 TRIM34Q9BYJ4 488 aa6.05□□□□□ -1.44
SNHG1-202ENST00000535689 ZNF777Q9ULD5 760 aaPredicted RBP6.05□□□□□ -1.44
SNHG1-202ENST00000535689 PER1O15534 1290 aaPredicted RBP6.04□□□□□ -1.44
SNHG1-202ENST00000535689 LZTS3O60299 673 aaPredicted RBP6.04□□□□□ -1.44
SNHG1-202ENST00000535689 PPP1R15AO75807 674 aaPredicted RBP6.04□□□□□ -1.44
SNHG1-202ENST00000535689 S1PR4O95977 384 aa6.04□□□□□ -1.44
SNHG1-202ENST00000535689 RPIAP49247 311 aa6.04□□□□□ -1.44
SNHG1-202ENST00000535689 POM121Q96HA1 1249 aa6.04□□□□□ -1.44
SNHG1-202ENST00000535689 UNC93B1Q9H1C4 597 aa6.04□□□□□ -1.44
SNHG1-202ENST00000535689 EIF4ENIF1Q9NRA8 985 aaKnown RBP6.04□□□□□ -1.44
SNHG1-202ENST00000535689 UNC13AQ9UPW8 1703 aa6.03□□□□□ -1.44
SNHG1-202ENST00000535689 FBXO31Q5XUX0 539 aaPredicted RBP6.03□□□□□ -1.44
SNHG1-202ENST00000535689 ARHGAP9Q9BRR9 750 aa6.03□□□□□ -1.44
SNHG1-202ENST00000535689 HMX1Q9NP08 348 aaPredicted RBP6.03□□□□□ -1.44
SNHG1-202ENST00000535689 PRDM9Q9NQV7 894 aa6.03□□□□□ -1.44
SNHG1-202ENST00000535689 WNT7BP56706 349 aa6.02□□□□□ -1.45
SNHG1-202ENST00000535689 SIRT1Q96EB6 747 aa6.02□□□□□ -1.45
SNHG1-202ENST00000535689 FCF1Q9Y324 198 aaKnown RBP6.02□□□□□ -1.45
SNHG1-202ENST00000535689 RNF223E7ERA6 249 aa6.01□□□□□ -1.45
SNHG1-202ENST00000535689 NBPF20Q3BBV1 942 aa6.01□□□□□ -1.45
SNHG1-202ENST00000535689 HDGFL1Q5TGJ6 251 aa6.01□□□□□ -1.45
SNHG1-202ENST00000535689 DZIP3Q86Y13 1208 aaKnown RBP6.01□□□□□ -1.45
SNHG1-202ENST00000535689 GLMNQ92990 594 aa6.01□□□□□ -1.45
SNHG1-202ENST00000535689 EMID1Q96A84 441 aaPredicted RBP6.01□□□□□ -1.45
SNHG1-202ENST00000535689 IRX2Q9BZI1 471 aaPredicted RBP6.01□□□□□ -1.45
SNHG1-202ENST00000535689 PRKD2Q9BZL6 878 aa6.01□□□□□ -1.45
SNHG1-202ENST00000535689 MAP10Q9P2G4 905 aa6.01□□□□□ -1.45
SNHG1-202ENST00000535689 VARSP26640 1264 aaKnown RBP6□□□□□ -1.45
SNHG1-202ENST00000535689 VAC14Q08AM6 782 aa6□□□□□ -1.45
SNHG1-202ENST00000535689 SLFNL1Q499Z3 407 aa6□□□□□ -1.45
SNHG1-202ENST00000535689 PLA2G2CQ5R387 149 aa6□□□□□ -1.45
SNHG1-202ENST00000535689 NFATC2IPQ8NCF5 419 aa6□□□□□ -1.45
SNHG1-202ENST00000535689 ESF1Q9H501 851 aaKnown RBP6□□□□□ -1.45
SNHG1-202ENST00000535689 IRF5Q13568 498 aa5.99□□□□□ -1.45
SNHG1-202ENST00000535689 MAP7D1Q3KQU3 841 aa5.99□□□□□ -1.45
SNHG1-202ENST00000535689 SEPT12Q8IYM1 358 aa5.99□□□□□ -1.45
SNHG1-202ENST00000535689 FAM174AQ8TBP5 190 aa5.99□□□□□ -1.45
SNHG1-202ENST00000535689 SLC10A4Q96EP9 437 aa5.99□□□□□ -1.45
SNHG1-202ENST00000535689 CCDC82Q8N4S0 544 aa5.98□□□□□ -1.45
SNHG1-202ENST00000535689 ZNF511Q8NB15 262 aa5.98□□□□□ -1.45
SNHG1-202ENST00000535689 ALG2Q9H553 416 aa5.98□□□□□ -1.45
SNHG1-202ENST00000535689 PCDHB9Q9Y5E1 797 aa5.98□□□□□ -1.45
SNHG1-202ENST00000535689 ARID3CA6NKF2 412 aa5.97□□□□□ -1.45
SNHG1-202ENST00000535689 FBXO45P0C2W1 286 aa5.97□□□□□ -1.45
SNHG1-202ENST00000535689 EPS8L1Q8TE68 723 aa5.97□□□□□ -1.45
SNHG1-202ENST00000535689 ARID3AQ99856 593 aa5.97□□□□□ -1.45
SNHG1-202ENST00000535689 CECR2Q9BXF3 1484 aa5.96□□□□□ -1.45
SNHG1-202ENST00000535689 MYO15BQ96JP2 1530 aa5.96□□□□□ -1.46
SNHG1-202ENST00000535689 MAGEB6P1A0A0J9YX57 407 aa5.96□□□□□ -1.46
SNHG1-202ENST00000535689 DHX9Q08211 1270 aaKnown RBP5.96□□□□□ -1.46
SNHG1-202ENST00000535689 TRIM32Q13049 653 aa5.96□□□□□ -1.46
SNHG1-202ENST00000535689 LIAT1Q6ZQX7 453 aa5.96□□□□□ -1.46
SNHG1-202ENST00000535689 ADAM32Q8TC27 787 aa5.96□□□□□ -1.46
SNHG1-202ENST00000535689 BAP1Q92560 729 aa5.96□□□□□ -1.46
SNHG1-202ENST00000535689 RBM19Q9Y4C8 960 aaKnown RBP5.96□□□□□ -1.46
SNHG1-202ENST00000535689 SHROOM4Q9ULL8 1493 aa5.96□□□□□ -1.46
SNHG1-202ENST00000535689 PATL2C9JE40 543 aaKnown RBP5.95□□□□□ -1.46
SNHG1-202ENST00000535689 SH3BP5LQ7L8J4 393 aa5.95□□□□□ -1.46
SNHG1-202ENST00000535689 TRIM50Q86XT4 487 aa5.95□□□□□ -1.46
SNHG1-202ENST00000535689 MPNDQ8N594 471 aa5.95□□□□□ -1.46
SNHG1-202ENST00000535689 ATP1A2P50993 1020 aa5.94□□□□□ -1.46
SNHG1-202ENST00000535689 SH3RF1Q7Z6J0 888 aa5.94□□□□□ -1.46
SNHG1-202ENST00000535689 RNF135Q8IUD6 432 aa5.94□□□□□ -1.46
SNHG1-202ENST00000535689 TRMT44Q8IYL2 757 aaKnown RBP5.94□□□□□ -1.46
SNHG1-202ENST00000535689 EHBP1Q8NDI1 1231 aa5.94□□□□□ -1.46
SNHG1-202ENST00000535689 PBXIP1Q96AQ6 731 aa5.94□□□□□ -1.46
SNHG1-202ENST00000535689 PPP1R12CQ9BZL4 782 aa5.94□□□□□ -1.46
SNHG1-202ENST00000535689 CEP126Q9P2H0 1117 aa5.94□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms