RNA–Protein interactions for RNA: ENST00000534638.1

ME3-211, Transcript of malic enzyme 3, humanhuman

TSL 4

Gene ME3, Length 565 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ME3-211ENST00000534638 NR1I2O75469 434 aa5.83□□□□□ -1.48
ME3-211ENST00000534638 FUT2Q10981 343 aa5.83□□□□□ -1.48
ME3-211ENST00000534638 NUTM2DQ5VT03 806 aaPredicted RBP5.83□□□□□ -1.48
ME3-211ENST00000534638 NUTM1Q86Y26 1132 aa5.83□□□□□ -1.48
ME3-211ENST00000534638 NUTM2AQ8IVF1 878 aaPredicted RBP5.83□□□□□ -1.48
ME3-211ENST00000534638 UCN2Q96RP3 112 aa5.83□□□□□ -1.48
ME3-211ENST00000534638 SOCS7O14512 581 aa5.82□□□□□ -1.48
ME3-211ENST00000534638 ATP6V1AP38606 617 aa5.82□□□□□ -1.48
ME3-211ENST00000534638 TLL1O43897 1013 aa5.81□□□□□ -1.48
ME3-211ENST00000534638 TUSC1Q2TAM9 212 aa5.81□□□□□ -1.48
ME3-211ENST00000534638 MORN1Q5T089 497 aa5.81□□□□□ -1.48
ME3-211ENST00000534638 SCUBE3Q8IX30 993 aa5.81□□□□□ -1.48
ME3-211ENST00000534638 TFIP11Q9UBB9 837 aaKnown RBP5.81□□□□□ -1.48
ME3-211ENST00000534638 KDM4AO75164 1064 aa5.8□□□□□ -1.48
ME3-211ENST00000534638 GRIPAP1Q4V328 841 aa5.8□□□□□ -1.48
ME3-211ENST00000534638 PPP1R18Q6NYC8 613 aa5.8□□□□□ -1.48
ME3-211ENST00000534638 TRIM34Q9BYJ4 488 aa5.8□□□□□ -1.48
ME3-211ENST00000534638 RGS20O76081 388 aa5.79□□□□□ -1.48
ME3-211ENST00000534638 CDK11BP21127 795 aaKnown RBP5.79□□□□□ -1.48
ME3-211ENST00000534638 WASHC4Q2M389 1173 aa5.79□□□□□ -1.48
ME3-211ENST00000534638 PRR7Q8TB68 274 aa5.79□□□□□ -1.48
ME3-211ENST00000534638 ALG2Q9H553 416 aa5.79□□□□□ -1.48
ME3-211ENST00000534638 EIF4ENIF1Q9NRA8 985 aaKnown RBP5.79□□□□□ -1.48
ME3-211ENST00000534638 CDK11AQ9UQ88 783 aaPredicted RBP5.79□□□□□ -1.48
ME3-211ENST00000534638 SLC27A5Q9Y2P5 690 aa5.79□□□□□ -1.48
ME3-211ENST00000534638 ATG7O95352 703 aa5.78□□□□□ -1.48
ME3-211ENST00000534638 ADH1BP00325 375 aa5.78□□□□□ -1.48
ME3-211ENST00000534638 HSP90B1P14625 803 aaKnown RBP5.78□□□□□ -1.48
ME3-211ENST00000534638 GGCXP38435 758 aa5.78□□□□□ -1.48
ME3-211ENST00000534638 USP46P62068 366 aa5.78□□□□□ -1.48
ME3-211ENST00000534638 CTDSPL2Q05D32 466 aa5.78□□□□□ -1.48
ME3-211ENST00000534638 EPS8L1Q8TE68 723 aa5.78□□□□□ -1.48
ME3-211ENST00000534638 LRRN4Q8WUT4 740 aa5.78□□□□□ -1.48
ME3-211ENST00000534638 TSC1Q92574 1164 aa5.78□□□□□ -1.48
ME3-211ENST00000534638 GUCA2AQ02747 115 aa5.77□□□□□ -1.49
ME3-211ENST00000534638 TBC1D9Q6ZT07 1266 aa5.77□□□□□ -1.49
ME3-211ENST00000534638 HLA-CQ95604 372 aa5.77□□□□□ -1.49
ME3-211ENST00000534638 SPSB2Q99619 263 aa5.77□□□□□ -1.49
ME3-211ENST00000534638 KIAA1522Q9P206 1035 aaPredicted RBP5.77□□□□□ -1.49
ME3-211ENST00000534638 MAFBQ9Y5Q3 323 aaPredicted RBP5.77□□□□□ -1.49
ME3-211ENST00000534638 HOXA2O43364 376 aa5.76□□□□□ -1.49
ME3-211ENST00000534638 FMNL1O95466 1100 aaPredicted RBP5.76□□□□□ -1.49
ME3-211ENST00000534638 S1PR4O95977 384 aa5.76□□□□□ -1.49
ME3-211ENST00000534638 STK32AQ8WU08 396 aa5.76□□□□□ -1.49
ME3-211ENST00000534638 THAP11Q96EK4 314 aa5.76□□□□□ -1.49
ME3-211ENST00000534638 SLC6A16Q9GZN6 736 aa5.76□□□□□ -1.49
ME3-211ENST00000534638 ZBTB3Q9H5J0 574 aa5.76□□□□□ -1.49
ME3-211ENST00000534638 IGSF5Q9NSI5 407 aa5.76□□□□□ -1.49
ME3-211ENST00000534638 GNEQ9Y223 722 aaKnown RBP5.76□□□□□ -1.49
ME3-211ENST00000534638 RBM47A0AV96 593 aaKnown RBP5.75□□□□□ -1.49
ME3-211ENST00000534638 BRICD5Q6PL45 260 aa5.75□□□□□ -1.49
ME3-211ENST00000534638 MRRFQ96E11 262 aaKnown RBP5.75□□□□□ -1.49
ME3-211ENST00000534638 PUS7Q96PZ0 661 aaKnown RBP5.75□□□□□ -1.49
ME3-211ENST00000534638 ZMIZ1Q9ULJ6 1067 aa5.75□□□□□ -1.49
ME3-211ENST00000534638 SALL2Q9Y467 1007 aaPredicted RBP5.75□□□□□ -1.49
ME3-211ENST00000534638 RNF223E7ERA6 249 aa5.74□□□□□ -1.49
ME3-211ENST00000534638 PPEF1O14829 653 aaPredicted RBP5.74□□□□□ -1.49
ME3-211ENST00000534638 HMGB1P09429 215 aaKnown RBP5.74□□□□□ -1.49
ME3-211ENST00000534638 Q3C1V9 767 aa5.74□□□□□ -1.49
ME3-211ENST00000534638 TMEM164Q5U3C3 297 aa5.74□□□□□ -1.49
ME3-211ENST00000534638 RNF19BQ6ZMZ0 732 aa5.74□□□□□ -1.49
ME3-211ENST00000534638 TXNDC2Q86VQ3 553 aa5.74□□□□□ -1.49
ME3-211ENST00000534638 FDX1P10109 184 aa5.73□□□□□ -1.49
ME3-211ENST00000534638 GJA5P36382 358 aa5.73□□□□□ -1.49
ME3-211ENST00000534638 NOM1Q5C9Z4 860 aaKnown RBP5.73□□□□□ -1.49
ME3-211ENST00000534638 PRPF38BQ5VTL8 546 aaKnown RBP5.73□□□□□ -1.49
ME3-211ENST00000534638 FAM160A2Q8N612 972 aaPredicted RBP5.73□□□□□ -1.49
ME3-211ENST00000534638 PRKD2Q9BZL6 878 aa5.73□□□□□ -1.49
ME3-211ENST00000534638 PCDHGC3Q9UN70 934 aa5.73□□□□□ -1.49
ME3-211ENST00000534638 SEMA3FQ13275 785 aa5.72□□□□□ -1.49
ME3-211ENST00000534638 PHLDB3Q6NSJ2 640 aa5.72□□□□□ -1.49
ME3-211ENST00000534638 DNAJC14Q6Y2X3 702 aaPredicted RBP5.72□□□□□ -1.49
ME3-211ENST00000534638 FAM177A1Q8N128 213 aaPredicted RBP5.72□□□□□ -1.49
ME3-211ENST00000534638 ANKLE1Q8NAG6 615 aa5.72□□□□□ -1.49
ME3-211ENST00000534638 CCER1Q8TC90 406 aaPredicted RBP5.72□□□□□ -1.49
ME3-211ENST00000534638 CFAP99D6REC4 459 aa5.71□□□□□ -1.5
ME3-211ENST00000534638 PIK3CDO00329 1044 aa5.71□□□□□ -1.5
ME3-211ENST00000534638 ATP9BO43861 1147 aa5.71□□□□□ -1.5
ME3-211ENST00000534638 MSS51Q4VC12 460 aa5.71□□□□□ -1.5
ME3-211ENST00000534638 B4GALNT3Q6L9W6 998 aa5.71□□□□□ -1.5
ME3-211ENST00000534638 HELBQ8NG08 1087 aaPredicted RBP5.71□□□□□ -1.5
ME3-211ENST00000534638 SYMPKQ92797 1274 aaKnown RBP5.71□□□□□ -1.5
ME3-211ENST00000534638 USB1Q9BQ65 265 aaKnown RBP5.71□□□□□ -1.5
ME3-211ENST00000534638 PRDM9Q9NQV7 894 aa5.71□□□□□ -1.5
ME3-211ENST00000534638 NOVA2Q9UNW9 492 aaKnown RBP5.71□□□□□ -1.5
ME3-211ENST00000534638 ZNF16P17020 682 aaPredicted RBP5.7□□□□□ -1.5
ME3-211ENST00000534638 NR6A1Q15406 480 aa5.7□□□□□ -1.5
ME3-211ENST00000534638 SLAIN2Q9P270 581 aa5.7□□□□□ -1.5
ME3-211ENST00000534638 V9GY48 417 aaPredicted RBP5.7□□□□□ -1.5
ME3-211ENST00000534638 C6orf229H3BNL8 230 aa5.69□□□□□ -1.5
ME3-211ENST00000534638 SCNN1AP37088 669 aa5.69□□□□□ -1.5
ME3-211ENST00000534638 SLC19A1P41440 591 aa5.69□□□□□ -1.5
ME3-211ENST00000534638 SERPINB4P48594 390 aa5.69□□□□□ -1.5
ME3-211ENST00000534638 KANK4Q5T7N3 995 aaPredicted RBP5.69□□□□□ -1.5
ME3-211ENST00000534638 GIPC2Q8TF65 315 aa5.69□□□□□ -1.5
ME3-211ENST00000534638 BCL2L13Q9BXK5 485 aa5.69□□□□□ -1.5
ME3-211ENST00000534638 SOX11P35716 441 aa5.68□□□□□ -1.5
ME3-211ENST00000534638 MTMR2Q13614 643 aa5.68□□□□□ -1.5
ME3-211ENST00000534638 PLA2G2CQ5R387 149 aa5.68□□□□□ -1.5
ME3-211ENST00000534638 RETREG3Q86VR2 466 aa5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms