RNA–Protein interactions for RNA: ENST00000534538.1

RECQL4-207, Transcript of RecQ like helicase 4, humanhuman

TSL 3

Gene RECQL4, Length 725 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RECQL4-207ENST00000534538 SF3B2Q13435 895 aaKnown RBP25.73■■□□□ 1.71
RECQL4-207ENST00000534538 CDK19Q9BWU1 502 aa25.71■■□□□ 1.71
RECQL4-207ENST00000534538 COL14A1Q05707 1796 aaKnown RBP25.71■■□□□ 1.71
RECQL4-207ENST00000534538 ARHGEF28Q8N1W1 1705 aaKnown RBP25.71■■□□□ 1.71
RECQL4-207ENST00000534538 FAM98CQ17RN3 349 aaKnown RBP25.7■■□□□ 1.7
RECQL4-207ENST00000534538 DEFB132Q7Z7B7 95 aa25.7■■□□□ 1.7
RECQL4-207ENST00000534538 NRAPQ86VF7 1730 aa25.7■■□□□ 1.7
RECQL4-207ENST00000534538 ATP7BP35670 1465 aa25.7■■□□□ 1.7
RECQL4-207ENST00000534538 SPATA31A5Q5VU36 1347 aa25.68■■□□□ 1.7
RECQL4-207ENST00000534538 SPATA31A7Q8IWB4 1347 aa25.68■■□□□ 1.7
RECQL4-207ENST00000534538 CCDC61Q9Y6R9 512 aa25.68■■□□□ 1.7
RECQL4-207ENST00000534538 PRDM11Q9NQV5 511 aa25.67■■□□□ 1.7
RECQL4-207ENST00000534538 ITSN1Q15811 1721 aa25.66■■□□□ 1.7
RECQL4-207ENST00000534538 A0A0G2JS52 829 aa25.66■■□□□ 1.7
RECQL4-207ENST00000534538 PLEKHG3A1L390 1219 aa25.66■■□□□ 1.7
RECQL4-207ENST00000534538 MYT1Q01538 1121 aa25.66■■□□□ 1.7
RECQL4-207ENST00000534538 POLR3AO14802 1390 aaPredicted RBP25.66■■□□□ 1.7
RECQL4-207ENST00000534538 KIAA1210Q9ULL0 1709 aa25.65■■□□□ 1.7
RECQL4-207ENST00000534538 CRYBG1Q9Y4K1 1723 aa25.65■■□□□ 1.7
RECQL4-207ENST00000534538 NBPF8Q3BBV2 869 aa25.64■■□□□ 1.7
RECQL4-207ENST00000534538 ACEP12821 1306 aa25.63■■□□□ 1.69
RECQL4-207ENST00000534538 NBPF1Q3BBV0 1214 aa25.63■■□□□ 1.69
RECQL4-207ENST00000534538 KIAA0232Q92628 1395 aa25.61■■□□□ 1.69
RECQL4-207ENST00000534538 BAG6P46379 1132 aa25.6■■□□□ 1.69
RECQL4-207ENST00000534538 SPATA31A1Q5TZJ5 1347 aa25.58■■□□□ 1.69
RECQL4-207ENST00000534538 ZC3H6P61129 1189 aaKnown RBP25.57■■□□□ 1.68
RECQL4-207ENST00000534538 CHRNA2Q15822 529 aa25.57■■□□□ 1.68
RECQL4-207ENST00000534538 NUTM2GQ5VZR2 741 aa25.57■■□□□ 1.68
RECQL4-207ENST00000534538 TOPAZ1Q8N9V7 1692 aa25.56■■□□□ 1.68
RECQL4-207ENST00000534538 ABTB2Q8N961 1025 aa25.55■■□□□ 1.68
RECQL4-207ENST00000534538 THSD7AQ9UPZ6 1657 aa25.55■■□□□ 1.68
RECQL4-207ENST00000534538 CENPJQ9HC77 1338 aaPredicted RBP25.54■■□□□ 1.68
RECQL4-207ENST00000534538 SRPK2P78362 688 aaKnown RBP25.53■■□□□ 1.68
RECQL4-207ENST00000534538 PHRF1Q9P1Y6 1649 aaKnown RBP25.52■■□□□ 1.68
RECQL4-207ENST00000534538 FAM182BQ5T319 152 aa25.52■■□□□ 1.68
RECQL4-207ENST00000534538 STRN4Q9NRL3 753 aa25.52■■□□□ 1.68
RECQL4-207ENST00000534538 USP19O94966 1318 aa25.51■■□□□ 1.67
RECQL4-207ENST00000534538 CPDO75976 1380 aa25.51■■□□□ 1.67
RECQL4-207ENST00000534538 BRD4O60885 1362 aaPredicted RBP25.5■■□□□ 1.67
RECQL4-207ENST00000534538 EVA1CP58658 441 aa25.5■■□□□ 1.67
RECQL4-207ENST00000534538 NLRP13Q86W25 1043 aa25.5■■□□□ 1.67
RECQL4-207ENST00000534538 CABP2Q9NPB3 220 aa25.5■■□□□ 1.67
RECQL4-207ENST00000534538 PPIP5K1Q6PFW1 1433 aa25.49■■□□□ 1.67
RECQL4-207ENST00000534538 EN1Q05925 392 aaPredicted RBP25.49■■□□□ 1.67
RECQL4-207ENST00000534538 FAM196AQ6ZSG2 479 aa25.49■■□□□ 1.67
RECQL4-207ENST00000534538 BARGINQ6ZT62 677 aa25.49■■□□□ 1.67
RECQL4-207ENST00000534538 DISP2A7MBM2 1401 aa25.48■■□□□ 1.67
RECQL4-207ENST00000534538 SSH2Q76I76 1423 aa25.47■■□□□ 1.67
RECQL4-207ENST00000534538 RGPD1P0DJD0 1748 aa25.47■■□□□ 1.67
RECQL4-207ENST00000534538 GCP02774 474 aa25.47■■□□□ 1.67
RECQL4-207ENST00000534538 L3MBTL2Q969R5 705 aa25.47■■□□□ 1.67
RECQL4-207ENST00000534538 USP35Q9P2H5 1018 aa25.45■■□□□ 1.66
RECQL4-207ENST00000534538 CAMTA1Q9Y6Y1 1673 aa25.45■■□□□ 1.66
RECQL4-207ENST00000534538 NRKQ7Z2Y5 1582 aa25.44■■□□□ 1.66
RECQL4-207ENST00000534538 LARP1Q6PKG0 1096 aaKnown RBP25.44■■□□□ 1.66
RECQL4-207ENST00000534538 CABP1Q9NZU7 370 aa25.44■■□□□ 1.66
RECQL4-207ENST00000534538 PSDA5PKW4 1024 aaPredicted RBP25.43■■□□□ 1.66
RECQL4-207ENST00000534538 TCP11L2Q8N4U5 519 aa25.43■■□□□ 1.66
RECQL4-207ENST00000534538 TRIM37O94972 964 aa25.42■■□□□ 1.66
RECQL4-207ENST00000534538 THRAP3Q9Y2W1 955 aaKnown RBP25.42■■□□□ 1.66
RECQL4-207ENST00000534538 PDE3BQ13370 1112 aa25.41■■□□□ 1.66
RECQL4-207ENST00000534538 CAMKK2Q96RR4 588 aa25.41■■□□□ 1.66
RECQL4-207ENST00000534538 LRP5O75197 1615 aa25.41■■□□□ 1.66
RECQL4-207ENST00000534538 LMO7Q8WWI1 1683 aa25.4■■□□□ 1.66
RECQL4-207ENST00000534538 USP6P35125 1406 aa25.39■■□□□ 1.66
RECQL4-207ENST00000534538 EZH2Q15910 746 aaKnown RBP25.39■■□□□ 1.66
RECQL4-207ENST00000534538 QRICH2Q9H0J4 1663 aa25.39■■□□□ 1.65
RECQL4-207ENST00000534538 EVC2Q86UK5 1308 aa25.38■■□□□ 1.65
RECQL4-207ENST00000534538 TNS1Q9HBL0 1735 aaKnown RBP25.38■■□□□ 1.65
RECQL4-207ENST00000534538 NLRP6P59044 892 aa25.38■■□□□ 1.65
RECQL4-207ENST00000534538 SIN3AQ96ST3 1273 aa25.37■■□□□ 1.65
RECQL4-207ENST00000534538 PARD3Q8TEW0 1356 aa25.36■■□□□ 1.65
RECQL4-207ENST00000534538 APBA3O96018 575 aa25.36■■□□□ 1.65
RECQL4-207ENST00000534538 AATKQ6ZMQ8 1374 aa25.35■■□□□ 1.65
RECQL4-207ENST00000534538 R3HDM1Q15032 1099 aaKnown RBP25.35■■□□□ 1.65
RECQL4-207ENST00000534538 ZNF692Q9BU19 519 aaPredicted RBP25.35■■□□□ 1.65
RECQL4-207ENST00000534538 COL5A2P05997 1499 aaPredicted RBP25.34■■□□□ 1.65
RECQL4-207ENST00000534538 C11orf95C9JLR9 678 aaPredicted RBP25.33■■□□□ 1.65
RECQL4-207ENST00000534538 SLIT3O75094 1523 aa25.32■■□□□ 1.64
RECQL4-207ENST00000534538 CRB1P82279 1406 aa25.31■■□□□ 1.64
RECQL4-207ENST00000534538 TRPM1Q7Z4N2 1603 aa25.31■■□□□ 1.64
RECQL4-207ENST00000534538 NEUROD1Q13562 356 aa25.31■■□□□ 1.64
RECQL4-207ENST00000534538 ROCK2O75116 1388 aaKnown RBP25.31■■□□□ 1.64
RECQL4-207ENST00000534538 ZBTB7CA1YPR0 619 aa25.28■■□□□ 1.64
RECQL4-207ENST00000534538 TTC21BQ7Z4L5 1316 aa25.28■■□□□ 1.64
RECQL4-207ENST00000534538 PARP4Q9UKK3 1724 aaKnown RBP25.26■■□□□ 1.63
RECQL4-207ENST00000534538 KCNH5Q8NCM2 988 aa25.26■■□□□ 1.63
RECQL4-207ENST00000534538 ARHGEF25Q86VW2 580 aa25.25■■□□□ 1.63
RECQL4-207ENST00000534538 AXIN2Q9Y2T1 843 aa25.25■■□□□ 1.63
RECQL4-207ENST00000534538 TTC21AQ8NDW8 1320 aa25.25■■□□□ 1.63
RECQL4-207ENST00000534538 PIK3C2AO00443 1686 aa25.25■■□□□ 1.63
RECQL4-207ENST00000534538 TOM1L2Q6ZVM7 507 aa25.24■■□□□ 1.63
RECQL4-207ENST00000534538 CPSF1Q10570 1443 aaKnown RBP25.23■■□□□ 1.63
RECQL4-207ENST00000534538 WDR17Q8IZU2 1322 aa25.23■■□□□ 1.63
RECQL4-207ENST00000534538 NBPF14Q5TI25 921 aa25.23■■□□□ 1.63
RECQL4-207ENST00000534538 COL18A1P39060 1754 aa25.23■■□□□ 1.63
RECQL4-207ENST00000534538 DDB1Q16531 1140 aa25.22■■□□□ 1.63
RECQL4-207ENST00000534538 CDCA7Q9BWT1 371 aaPredicted RBP25.22■■□□□ 1.63
RECQL4-207ENST00000534538 OVOS2A0A0G2JMS6 1433 aa25.2■■□□□ 1.63
RECQL4-207ENST00000534538 OVOS2A0A0J9YW53 1432 aa25.2■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 104.4 ms