RNA–Protein interactions for RNA: ENST00000534442.5

ECHDC1-223, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-223ENST00000534442 RSBN1LQ6PCB5 846 aaPredicted RBP8.19□□□□□ -1.1
ECHDC1-223ENST00000534442 NUTM2AQ8IVF1 878 aaPredicted RBP8.19□□□□□ -1.1
ECHDC1-223ENST00000534442 POM121Q96HA1 1249 aa8.19□□□□□ -1.1
ECHDC1-223ENST00000534442 ZBED2Q9BTP6 218 aa8.19□□□□□ -1.1
ECHDC1-223ENST00000534442 KIAA1468Q9P260 1216 aa8.19□□□□□ -1.1
ECHDC1-223ENST00000534442 EP400Q96L91 3159 aa8.18□□□□□ -1.1
ECHDC1-223ENST00000534442 APBB1O00213 710 aa8.18□□□□□ -1.1
ECHDC1-223ENST00000534442 PSEN2P49810 448 aa8.18□□□□□ -1.1
ECHDC1-223ENST00000534442 BANK1Q8NDB2 785 aa8.18□□□□□ -1.1
ECHDC1-223ENST00000534442 SNRKQ9NRH2 765 aa8.18□□□□□ -1.1
ECHDC1-223ENST00000534442 NHSL1Q5SYE7 1610 aa8.18□□□□□ -1.1
ECHDC1-223ENST00000534442 NDUFV2P19404 249 aa8.17□□□□□ -1.1
ECHDC1-223ENST00000534442 POTEEQ6S8J3 1075 aa8.17□□□□□ -1.1
ECHDC1-223ENST00000534442 NUTM1Q86Y26 1132 aa8.17□□□□□ -1.1
ECHDC1-223ENST00000534442 RGS12O14924 1447 aa8.17□□□□□ -1.1
ECHDC1-223ENST00000534442 TRAPPC8Q9Y2L5 1435 aa8.17□□□□□ -1.1
ECHDC1-223ENST00000534442 TCOF1Q13428 1488 aaKnown RBP8.17□□□□□ -1.1
ECHDC1-223ENST00000534442 ERICH3Q5RHP9 1530 aa8.17□□□□□ -1.1
ECHDC1-223ENST00000534442 RNF17Q9BXT8 1623 aaKnown RBP8.17□□□□□ -1.1
ECHDC1-223ENST00000534442 C3P01024 1663 aa8.17□□□□□ -1.1
ECHDC1-223ENST00000534442 SPDYE5A6NIY4 337 aa8.16□□□□□ -1.1
ECHDC1-223ENST00000534442 ZFYVE16Q7Z3T8 1539 aa8.16□□□□□ -1.1
ECHDC1-223ENST00000534442 FNBP4Q8N3X1 1017 aaPredicted RBP8.16□□□□□ -1.1
ECHDC1-223ENST00000534442 ARID3AQ99856 593 aa8.16□□□□□ -1.1
ECHDC1-223ENST00000534442 PLA2R1Q13018 1463 aa8.15□□□□□ -1.1
ECHDC1-223ENST00000534442 NEO1Q92859 1461 aa8.15□□□□□ -1.1
ECHDC1-223ENST00000534442 GJA5P36382 358 aa8.15□□□□□ -1.1
ECHDC1-223ENST00000534442 QPCTQ16769 361 aa8.15□□□□□ -1.1
ECHDC1-223ENST00000534442 TMEM259Q4ZIN3 620 aa8.15□□□□□ -1.1
ECHDC1-223ENST00000534442 PCDHB15Q9Y5E8 787 aa8.15□□□□□ -1.1
ECHDC1-223ENST00000534442 ATAD2Q6PL18 1390 aa8.14□□□□□ -1.11
ECHDC1-223ENST00000534442 LILRB3O75022 631 aa8.14□□□□□ -1.11
ECHDC1-223ENST00000534442 PRELPP51888 382 aa8.14□□□□□ -1.11
ECHDC1-223ENST00000534442 CSPP1Q1MSJ5 1256 aa8.14□□□□□ -1.11
ECHDC1-223ENST00000534442 PROSER2Q86WR7 435 aaPredicted RBP8.14□□□□□ -1.11
ECHDC1-223ENST00000534442 RDH13Q8NBN7 331 aa8.14□□□□□ -1.11
ECHDC1-223ENST00000534442 COG6Q9Y2V7 657 aa8.14□□□□□ -1.11
ECHDC1-223ENST00000534442 CARMIL2Q6F5E8 1435 aa8.13□□□□□ -1.11
ECHDC1-223ENST00000534442 RICTORQ6R327 1708 aa8.13□□□□□ -1.11
ECHDC1-223ENST00000534442 ARHGAP33O14559 1287 aa8.13□□□□□ -1.11
ECHDC1-223ENST00000534442 KDM4AO75164 1064 aa8.13□□□□□ -1.11
ECHDC1-223ENST00000534442 SLC10A3P09131 477 aa8.13□□□□□ -1.11
ECHDC1-223ENST00000534442 GCGRP47871 477 aa8.13□□□□□ -1.11
ECHDC1-223ENST00000534442 RTL5Q5HYW3 569 aaPredicted RBP8.13□□□□□ -1.11
ECHDC1-223ENST00000534442 SWT1Q5T5J6 900 aaKnown RBP8.13□□□□□ -1.11
ECHDC1-223ENST00000534442 DMRTA1Q5VZB9 504 aa8.13□□□□□ -1.11
ECHDC1-223ENST00000534442 SLC4A5Q9BY07 1137 aa8.13□□□□□ -1.11
ECHDC1-223ENST00000534442 EFCAB5A4FU69 1503 aa8.13□□□□□ -1.11
ECHDC1-223ENST00000534442 RAPGEF2Q9Y4G8 1499 aa8.13□□□□□ -1.11
ECHDC1-223ENST00000534442 VARS2Q5ST30 1063 aaKnown RBP8.12□□□□□ -1.11
ECHDC1-223ENST00000534442 MTMR14Q8NCE2 650 aa8.12□□□□□ -1.11
ECHDC1-223ENST00000534442 SEPT9Q9UHD8 586 aaPredicted RBP8.12□□□□□ -1.11
ECHDC1-223ENST00000534442 RABGEF1Q9UJ41 708 aa8.12□□□□□ -1.11
ECHDC1-223ENST00000534442 AXIN2Q9Y2T1 843 aa8.12□□□□□ -1.11
ECHDC1-223ENST00000534442 LRP6O75581 1613 aa8.11□□□□□ -1.11
ECHDC1-223ENST00000534442 ERBB3P21860 1342 aa8.11□□□□□ -1.11
ECHDC1-223ENST00000534442 MEX3CQ5U5Q3 659 aaKnown RBP8.11□□□□□ -1.11
ECHDC1-223ENST00000534442 CABLES1Q8TDN4 633 aa8.11□□□□□ -1.11
ECHDC1-223ENST00000534442 ZNF777Q9ULD5 760 aaPredicted RBP8.11□□□□□ -1.11
ECHDC1-223ENST00000534442 HOXA2O43364 376 aa8.1□□□□□ -1.11
ECHDC1-223ENST00000534442 RAD21O60216 631 aa8.1□□□□□ -1.11
ECHDC1-223ENST00000534442 DENND4BO75064 1496 aaPredicted RBP8.1□□□□□ -1.11
ECHDC1-223ENST00000534442 ZMYM4Q5VZL5 1548 aa8.09□□□□□ -1.11
ECHDC1-223ENST00000534442 HRCP23327 699 aa8.09□□□□□ -1.11
ECHDC1-223ENST00000534442 USP46P62068 366 aa8.09□□□□□ -1.11
ECHDC1-223ENST00000534442 PRPF38BQ5VTL8 546 aaKnown RBP8.09□□□□□ -1.11
ECHDC1-223ENST00000534442 CCDC82Q8N4S0 544 aa8.09□□□□□ -1.11
ECHDC1-223ENST00000534442 PCDHGC3Q9UN70 934 aa8.09□□□□□ -1.11
ECHDC1-223ENST00000534442 VPS9D1Q9Y2B5 631 aa8.09□□□□□ -1.11
ECHDC1-223ENST00000534442 VWDEQ8N2E2 1590 aa8.09□□□□□ -1.11
ECHDC1-223ENST00000534442 SUPT6HQ7KZ85 1726 aaKnown RBP8.09□□□□□ -1.11
ECHDC1-223ENST00000534442 ST18O60284 1047 aa8.08□□□□□ -1.12
ECHDC1-223ENST00000534442 RSPH4AQ5TD94 716 aa8.08□□□□□ -1.12
ECHDC1-223ENST00000534442 HLA-CQ95604 372 aa8.08□□□□□ -1.12
ECHDC1-223ENST00000534442 FHOD3Q2V2M9 1422 aa8.08□□□□□ -1.12
ECHDC1-223ENST00000534442 AP1G2O75843 785 aa8.07□□□□□ -1.12
ECHDC1-223ENST00000534442 FDX1P10109 184 aa8.07□□□□□ -1.12
ECHDC1-223ENST00000534442 GUCA2AQ02747 115 aa8.07□□□□□ -1.12
ECHDC1-223ENST00000534442 FAM98CQ17RN3 349 aaKnown RBP8.07□□□□□ -1.12
ECHDC1-223ENST00000534442 FAM135BQ49AJ0 1406 aa8.06□□□□□ -1.12
ECHDC1-223ENST00000534442 PBX2P40425 430 aa8.06□□□□□ -1.12
ECHDC1-223ENST00000534442 LHX8Q68G74 356 aa8.06□□□□□ -1.12
ECHDC1-223ENST00000534442 MARVELD3Q96A59 401 aa8.06□□□□□ -1.12
ECHDC1-223ENST00000534442 GDPD2Q9HCC8 539 aa8.06□□□□□ -1.12
ECHDC1-223ENST00000534442 JCADQ9P266 1359 aa8.06□□□□□ -1.12
ECHDC1-223ENST00000534442 ABCA9Q8IUA7 1624 aa8.05□□□□□ -1.12
ECHDC1-223ENST00000534442 EMP3P54852 163 aa8.05□□□□□ -1.12
ECHDC1-223ENST00000534442 SAMD7Q7Z3H4 446 aa8.05□□□□□ -1.12
ECHDC1-223ENST00000534442 ZNF687Q8N1G0 1237 aa8.05□□□□□ -1.12
ECHDC1-223ENST00000534442 ZBTB3Q9H5J0 574 aa8.05□□□□□ -1.12
ECHDC1-223ENST00000534442 ZNF142P52746 1687 aaPredicted RBP8.05□□□□□ -1.12
ECHDC1-223ENST00000534442 BHMG1C9JSJ3 638 aaPredicted RBP8.04□□□□□ -1.12
ECHDC1-223ENST00000534442 USP17L8P0C7I0 530 aa8.04□□□□□ -1.12
ECHDC1-223ENST00000534442 COL13A1Q5TAT6 717 aaPredicted RBP8.04□□□□□ -1.12
ECHDC1-223ENST00000534442 BCL9LQ86UU0 1499 aa8.04□□□□□ -1.12
ECHDC1-223ENST00000534442 C9orf84Q5VXU9 1444 aa8.03□□□□□ -1.12
ECHDC1-223ENST00000534442 CDK13Q14004 1512 aaKnown RBP8.03□□□□□ -1.12
ECHDC1-223ENST00000534442 UTRNP46939 3433 aa8.03□□□□□ -1.12
ECHDC1-223ENST00000534442 ABCA8O94911 1581 aa8.03□□□□□ -1.12
ECHDC1-223ENST00000534442 NEURL4Q96JN8 1562 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms