RNA–Protein interactions for RNA: ENST00000533996.5

SOX9-AS1-213, SOX9 antisense RNA 1, humanhuman

TSL 5

Gene SOX9-AS1, Length 1,001 nt, Biotype retained intron, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX9-AS1-213ENST00000533996 A0A0G2JS52 829 aa14.06□□□□□ -0.16
SOX9-AS1-213ENST00000533996 FAM83GA6ND36 823 aa14.06□□□□□ -0.16
SOX9-AS1-213ENST00000533996 ITGAEP38570 1179 aa14.06□□□□□ -0.16
SOX9-AS1-213ENST00000533996 MYT1Q01538 1121 aa14.06□□□□□ -0.16
SOX9-AS1-213ENST00000533996 SIRT1Q96EB6 747 aa14.06□□□□□ -0.16
SOX9-AS1-213ENST00000533996 TNS1Q9HBL0 1735 aaKnown RBP14.05□□□□□ -0.16
SOX9-AS1-213ENST00000533996 FAM98CQ17RN3 349 aaKnown RBP14.05□□□□□ -0.16
SOX9-AS1-213ENST00000533996 CABLES1Q8TDN4 633 aa14.05□□□□□ -0.16
SOX9-AS1-213ENST00000533996 ZNF692Q9BU19 519 aaPredicted RBP14.05□□□□□ -0.16
SOX9-AS1-213ENST00000533996 PHF8Q9UPP1 1060 aa14.05□□□□□ -0.16
SOX9-AS1-213ENST00000533996 PARD3Q8TEW0 1356 aa14.04□□□□□ -0.16
SOX9-AS1-213ENST00000533996 IFT172Q9UG01 1749 aa14.04□□□□□ -0.16
SOX9-AS1-213ENST00000533996 COL14A1Q05707 1796 aaKnown RBP14.04□□□□□ -0.16
SOX9-AS1-213ENST00000533996 STK26Q9P289 416 aa14.03□□□□□ -0.16
SOX9-AS1-213ENST00000533996 NRXN1Q9ULB1 1477 aa14.03□□□□□ -0.16
SOX9-AS1-213ENST00000533996 ADGRB2O60241 1585 aa14.03□□□□□ -0.16
SOX9-AS1-213ENST00000533996 EZH2Q15910 746 aaKnown RBP14.02□□□□□ -0.17
SOX9-AS1-213ENST00000533996 CAMKK2Q96RR4 588 aa14.02□□□□□ -0.17
SOX9-AS1-213ENST00000533996 BTG4Q9NY30 223 aa14.02□□□□□ -0.17
SOX9-AS1-213ENST00000533996 RRBP1Q9P2E9 1410 aaKnown RBP14.01□□□□□ -0.17
SOX9-AS1-213ENST00000533996 ANKRD30BQ9BXX2 1392 aa14.01□□□□□ -0.17
SOX9-AS1-213ENST00000533996 THSD7AQ9UPZ6 1657 aa14.01□□□□□ -0.17
SOX9-AS1-213ENST00000533996 PLEKHH1Q9ULM0 1364 aa14□□□□□ -0.17
SOX9-AS1-213ENST00000533996 SPATA31A5Q5VU36 1347 aa14□□□□□ -0.17
SOX9-AS1-213ENST00000533996 SPATA31A7Q8IWB4 1347 aa14□□□□□ -0.17
SOX9-AS1-213ENST00000533996 ADGRF5Q8IZF2 1346 aa14□□□□□ -0.17
SOX9-AS1-213ENST00000533996 LMOD2Q6P5Q4 547 aa14□□□□□ -0.17
SOX9-AS1-213ENST00000533996 FAM196AQ6ZSG2 479 aa14□□□□□ -0.17
SOX9-AS1-213ENST00000533996 RTN4Q9NQC3 1192 aaKnown RBP14□□□□□ -0.17
SOX9-AS1-213ENST00000533996 YTHDC2Q9H6S0 1430 aaKnown RBP13.98□□□□□ -0.17
SOX9-AS1-213ENST00000533996 TMEM132EQ6IEE7 984 aa13.98□□□□□ -0.17
SOX9-AS1-213ENST00000533996 RREB1Q92766 1687 aa13.98□□□□□ -0.17
SOX9-AS1-213ENST00000533996 NBPF8Q3BBV2 869 aa13.97□□□□□ -0.17
SOX9-AS1-213ENST00000533996 FAM182BQ5T319 152 aa13.97□□□□□ -0.17
SOX9-AS1-213ENST00000533996 NBPF14Q5TI25 921 aa13.97□□□□□ -0.17
SOX9-AS1-213ENST00000533996 SSUH2Q9Y2M2 353 aa13.97□□□□□ -0.17
SOX9-AS1-213ENST00000533996 TRPM3Q9HCF6 1732 aaPredicted RBP13.96□□□□□ -0.17
SOX9-AS1-213ENST00000533996 ALS2Q96Q42 1657 aa13.96□□□□□ -0.17
SOX9-AS1-213ENST00000533996 PLEKHG5O94827 1062 aa13.96□□□□□ -0.17
SOX9-AS1-213ENST00000533996 APBA3O96018 575 aa13.96□□□□□ -0.17
SOX9-AS1-213ENST00000533996 PIK3C2GO75747 1445 aa13.96□□□□□ -0.18
SOX9-AS1-213ENST00000533996 ANKARQ7Z5J8 1434 aa13.96□□□□□ -0.18
SOX9-AS1-213ENST00000533996 NINLQ9Y2I6 1382 aa13.96□□□□□ -0.18
SOX9-AS1-213ENST00000533996 TRIM37O94972 964 aa13.95□□□□□ -0.18
SOX9-AS1-213ENST00000533996 SPON1Q9HCB6 807 aa13.95□□□□□ -0.18
SOX9-AS1-213ENST00000533996 NUP188Q5SRE5 1749 aa13.94□□□□□ -0.18
SOX9-AS1-213ENST00000533996 SPATA31A1Q5TZJ5 1347 aa13.93□□□□□ -0.18
SOX9-AS1-213ENST00000533996 SPATA31E1Q6ZUB1 1445 aa13.93□□□□□ -0.18
SOX9-AS1-213ENST00000533996 KCNQ2O43526 872 aa13.93□□□□□ -0.18
SOX9-AS1-213ENST00000533996 PPP1R1BQ9UD71 204 aaPredicted RBP13.93□□□□□ -0.18
SOX9-AS1-213ENST00000533996 GPRASP1Q5JY77 1395 aa13.93□□□□□ -0.18
SOX9-AS1-213ENST00000533996 DHX57Q6P158 1386 aaKnown RBP13.93□□□□□ -0.18
SOX9-AS1-213ENST00000533996 CRYBG1Q9Y4K1 1723 aa13.93□□□□□ -0.18
SOX9-AS1-213ENST00000533996 VASPP50552 380 aaPredicted RBP13.92□□□□□ -0.18
SOX9-AS1-213ENST00000533996 RGL3Q3MIN7 710 aa13.92□□□□□ -0.18
SOX9-AS1-213ENST00000533996 PMFBP1Q8TBY8 1022 aa13.92□□□□□ -0.18
SOX9-AS1-213ENST00000533996 C14orf93Q9H972 538 aaKnown RBP13.92□□□□□ -0.18
SOX9-AS1-213ENST00000533996 C11orf95C9JLR9 678 aaPredicted RBP13.9□□□□□ -0.18
SOX9-AS1-213ENST00000533996 PRDM11Q9NQV5 511 aa13.9□□□□□ -0.18
SOX9-AS1-213ENST00000533996 EIF3AQ14152 1382 aaKnown RBP13.89□□□□□ -0.19
SOX9-AS1-213ENST00000533996 PDE3BQ13370 1112 aa13.89□□□□□ -0.19
SOX9-AS1-213ENST00000533996 BARGINQ6ZT62 677 aa13.89□□□□□ -0.19
SOX9-AS1-213ENST00000533996 DLC1Q96QB1 1528 aa13.89□□□□□ -0.19
SOX9-AS1-213ENST00000533996 PRAM1Q96QH2 718 aa13.88□□□□□ -0.19
SOX9-AS1-213ENST00000533996 ACIN1Q9UKV3 1341 aaKnown RBP13.88□□□□□ -0.19
SOX9-AS1-213ENST00000533996 POGKQ9P215 609 aa13.87□□□□□ -0.19
SOX9-AS1-213ENST00000533996 RGPD3A6NKT7 1758 aaPredicted RBP13.86□□□□□ -0.19
SOX9-AS1-213ENST00000533996 RGPD4Q7Z3J3 1758 aa13.86□□□□□ -0.19
SOX9-AS1-213ENST00000533996 SAFB2Q14151 953 aaKnown RBP eCLIP13.84□□□□□ -0.19
SOX9-AS1-213ENST00000533996 CFAP70Q5T0N1 1121 aa13.84□□□□□ -0.19
SOX9-AS1-213ENST00000533996 ZNF784Q8NCA9 323 aaPredicted RBP13.84□□□□□ -0.19
SOX9-AS1-213ENST00000533996 STRN4Q9NRL3 753 aa13.84□□□□□ -0.19
SOX9-AS1-213ENST00000533996 THRAP3Q9Y2W1 955 aaKnown RBP13.84□□□□□ -0.19
SOX9-AS1-213ENST00000533996 CAMTA1Q9Y6Y1 1673 aa13.84□□□□□ -0.19
SOX9-AS1-213ENST00000533996 TULP4Q9NRJ4 1543 aa13.84□□□□□ -0.19
SOX9-AS1-213ENST00000533996 KIAA0232Q92628 1395 aa13.83□□□□□ -0.19
SOX9-AS1-213ENST00000533996 PHRF1Q9P1Y6 1649 aaKnown RBP13.83□□□□□ -0.2
SOX9-AS1-213ENST00000533996 PLSCR1O15162 318 aa13.83□□□□□ -0.2
SOX9-AS1-213ENST00000533996 PAK3O75914 559 aaPredicted RBP13.83□□□□□ -0.2
SOX9-AS1-213ENST00000533996 EVA1CP58658 441 aa13.83□□□□□ -0.2
SOX9-AS1-213ENST00000533996 IFFO2Q5TF58 517 aa13.83□□□□□ -0.2
SOX9-AS1-213ENST00000533996 NGDNQ8NEJ9 315 aaKnown RBP13.83□□□□□ -0.2
SOX9-AS1-213ENST00000533996 CHD4Q14839 1912 aa13.83□□□□□ -0.2
SOX9-AS1-213ENST00000533996 ITSN1Q15811 1721 aa13.81□□□□□ -0.2
SOX9-AS1-213ENST00000533996 CASZ1Q86V15 1759 aa13.81□□□□□ -0.2
SOX9-AS1-213ENST00000533996 WASLO00401 505 aaPredicted RBP13.81□□□□□ -0.2
SOX9-AS1-213ENST00000533996 CHRNA2Q15822 529 aa13.81□□□□□ -0.2
SOX9-AS1-213ENST00000533996 TCP11L2Q8N4U5 519 aa13.81□□□□□ -0.2
SOX9-AS1-213ENST00000533996 USP35Q9P2H5 1018 aa13.81□□□□□ -0.2
SOX9-AS1-213ENST00000533996 PARP4Q9UKK3 1724 aaKnown RBP13.81□□□□□ -0.2
SOX9-AS1-213ENST00000533996 SSH2Q76I76 1423 aa13.81□□□□□ -0.2
SOX9-AS1-213ENST00000533996 ATP7BP35670 1465 aa13.8□□□□□ -0.2
SOX9-AS1-213ENST00000533996 PRR36Q9H6K5 1346 aa13.8□□□□□ -0.2
SOX9-AS1-213ENST00000533996 SBF2Q86WG5 1849 aa13.79□□□□□ -0.2
SOX9-AS1-213ENST00000533996 SENP3-EIF4A1A0A087X0R7 540 aa13.79□□□□□ -0.2
SOX9-AS1-213ENST00000533996 C1QTNF8P60827 252 aa13.79□□□□□ -0.2
SOX9-AS1-213ENST00000533996 MPHOSPH9Q99550 1183 aa13.79□□□□□ -0.2
SOX9-AS1-213ENST00000533996 RBM42Q9BTD8 480 aaKnown RBP13.79□□□□□ -0.2
SOX9-AS1-213ENST00000533996 ZC3H6P61129 1189 aaKnown RBP13.78□□□□□ -0.2
SOX9-AS1-213ENST00000533996 NRKQ7Z2Y5 1582 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms