RNA–Protein interactions for RNA: ENST00000533908.5

UBXN1-216, Transcript of UBX domain protein 1, humanhuman

TSL 1 (best)

Gene UBXN1, Length 739 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-216ENST00000533908 FAM98CQ17RN3 349 aaKnown RBP26.41■■□□□ 1.82
UBXN1-216ENST00000533908 PAK3O75914 559 aaPredicted RBP26.4■■□□□ 1.82
UBXN1-216ENST00000533908 NUDT16Q96DE0 195 aaKnown RBP26.4■■□□□ 1.82
UBXN1-216ENST00000533908 ARHGEF28Q8N1W1 1705 aaKnown RBP26.39■■□□□ 1.81
UBXN1-216ENST00000533908 CRYBG1Q9Y4K1 1723 aa26.37■■□□□ 1.81
UBXN1-216ENST00000533908 COL14A1Q05707 1796 aaKnown RBP26.37■■□□□ 1.81
UBXN1-216ENST00000533908 ATP7BP35670 1465 aa26.36■■□□□ 1.81
UBXN1-216ENST00000533908 CDK19Q9BWU1 502 aa26.36■■□□□ 1.81
UBXN1-216ENST00000533908 A0A0G2JS52 829 aa26.35■■□□□ 1.81
UBXN1-216ENST00000533908 MYT1Q01538 1121 aa26.35■■□□□ 1.81
UBXN1-216ENST00000533908 SPATA31A5Q5VU36 1347 aa26.35■■□□□ 1.81
UBXN1-216ENST00000533908 SPATA31A7Q8IWB4 1347 aa26.35■■□□□ 1.81
UBXN1-216ENST00000533908 SF3B2Q13435 895 aaKnown RBP26.34■■□□□ 1.81
UBXN1-216ENST00000533908 FAM182BQ5T319 152 aa26.34■■□□□ 1.81
UBXN1-216ENST00000533908 NBPF1Q3BBV0 1214 aa26.33■■□□□ 1.81
UBXN1-216ENST00000533908 PRDM11Q9NQV5 511 aa26.32■■□□□ 1.8
UBXN1-216ENST00000533908 NUTM2GQ5VZR2 741 aa26.31■■□□□ 1.8
UBXN1-216ENST00000533908 CHRNA2Q15822 529 aa26.3■■□□□ 1.8
UBXN1-216ENST00000533908 KIAA0232Q92628 1395 aa26.3■■□□□ 1.8
UBXN1-216ENST00000533908 NBPF8Q3BBV2 869 aa26.29■■□□□ 1.8
UBXN1-216ENST00000533908 ACEP12821 1306 aa26.29■■□□□ 1.8
UBXN1-216ENST00000533908 ZC3H6P61129 1189 aaKnown RBP26.28■■□□□ 1.8
UBXN1-216ENST00000533908 POLR3AO14802 1390 aaPredicted RBP26.28■■□□□ 1.8
UBXN1-216ENST00000533908 ITSN1Q15811 1721 aa26.28■■□□□ 1.8
UBXN1-216ENST00000533908 CCDC61Q9Y6R9 512 aa26.27■■□□□ 1.8
UBXN1-216ENST00000533908 PLEKHG3A1L390 1219 aa26.26■■□□□ 1.79
UBXN1-216ENST00000533908 SPATA31A1Q5TZJ5 1347 aa26.25■■□□□ 1.79
UBXN1-216ENST00000533908 BAG6P46379 1132 aa26.24■■□□□ 1.79
UBXN1-216ENST00000533908 THSD7AQ9UPZ6 1657 aa26.24■■□□□ 1.79
UBXN1-216ENST00000533908 KIAA1210Q9ULL0 1709 aa26.23■■□□□ 1.79
UBXN1-216ENST00000533908 TOPAZ1Q8N9V7 1692 aa26.23■■□□□ 1.79
UBXN1-216ENST00000533908 EN1Q05925 392 aaPredicted RBP26.23■■□□□ 1.79
UBXN1-216ENST00000533908 PHRF1Q9P1Y6 1649 aaKnown RBP26.23■■□□□ 1.79
UBXN1-216ENST00000533908 STRN4Q9NRL3 753 aa26.22■■□□□ 1.79
UBXN1-216ENST00000533908 PSDA5PKW4 1024 aaPredicted RBP26.21■■□□□ 1.79
UBXN1-216ENST00000533908 ABTB2Q8N961 1025 aa26.19■■□□□ 1.78
UBXN1-216ENST00000533908 CABP2Q9NPB3 220 aa26.18■■□□□ 1.78
UBXN1-216ENST00000533908 CAMTA1Q9Y6Y1 1673 aa26.16■■□□□ 1.78
UBXN1-216ENST00000533908 USP35Q9P2H5 1018 aa26.16■■□□□ 1.78
UBXN1-216ENST00000533908 SRPK2P78362 688 aaKnown RBP26.15■■□□□ 1.78
UBXN1-216ENST00000533908 USP19O94966 1318 aa26.14■■□□□ 1.78
UBXN1-216ENST00000533908 CENPJQ9HC77 1338 aaPredicted RBP26.14■■□□□ 1.78
UBXN1-216ENST00000533908 RGPD1P0DJD0 1748 aa26.14■■□□□ 1.78
UBXN1-216ENST00000533908 EVA1CP58658 441 aa26.14■■□□□ 1.78
UBXN1-216ENST00000533908 LARP1Q6PKG0 1096 aaKnown RBP26.14■■□□□ 1.78
UBXN1-216ENST00000533908 PPIP5K1Q6PFW1 1433 aa26.14■■□□□ 1.77
UBXN1-216ENST00000533908 SSH2Q76I76 1423 aa26.14■■□□□ 1.77
UBXN1-216ENST00000533908 NRKQ7Z2Y5 1582 aa26.13■■□□□ 1.77
UBXN1-216ENST00000533908 TRIM37O94972 964 aa26.12■■□□□ 1.77
UBXN1-216ENST00000533908 EZH2Q15910 746 aaKnown RBP26.12■■□□□ 1.77
UBXN1-216ENST00000533908 TNS1Q9HBL0 1735 aaKnown RBP26.11■■□□□ 1.77
UBXN1-216ENST00000533908 CPDO75976 1380 aa26.11■■□□□ 1.77
UBXN1-216ENST00000533908 GCP02774 474 aa26.11■■□□□ 1.77
UBXN1-216ENST00000533908 BARGINQ6ZT62 677 aa26.11■■□□□ 1.77
UBXN1-216ENST00000533908 L3MBTL2Q969R5 705 aa26.11■■□□□ 1.77
UBXN1-216ENST00000533908 DISP2A7MBM2 1401 aa26.11■■□□□ 1.77
UBXN1-216ENST00000533908 FAM196AQ6ZSG2 479 aa26.1■■□□□ 1.77
UBXN1-216ENST00000533908 NLRP13Q86W25 1043 aa26.1■■□□□ 1.77
UBXN1-216ENST00000533908 CAMKK2Q96RR4 588 aa26.1■■□□□ 1.77
UBXN1-216ENST00000533908 CABP1Q9NZU7 370 aa26.1■■□□□ 1.77
UBXN1-216ENST00000533908 LRP5O75197 1615 aa26.1■■□□□ 1.77
UBXN1-216ENST00000533908 LMO7Q8WWI1 1683 aa26.09■■□□□ 1.77
UBXN1-216ENST00000533908 R3HDM1Q15032 1099 aaKnown RBP26.09■■□□□ 1.77
UBXN1-216ENST00000533908 SIN3AQ96ST3 1273 aa26.07■■□□□ 1.76
UBXN1-216ENST00000533908 TCP11L2Q8N4U5 519 aa26.06■■□□□ 1.76
UBXN1-216ENST00000533908 QRICH2Q9H0J4 1663 aa26.05■■□□□ 1.76
UBXN1-216ENST00000533908 APBA3O96018 575 aa26.04■■□□□ 1.76
UBXN1-216ENST00000533908 PDE3BQ13370 1112 aa26.04■■□□□ 1.76
UBXN1-216ENST00000533908 USP6P35125 1406 aa26.03■■□□□ 1.76
UBXN1-216ENST00000533908 NLRP6P59044 892 aa26.02■■□□□ 1.76
UBXN1-216ENST00000533908 BRD4O60885 1362 aaPredicted RBP26.01■■□□□ 1.75
UBXN1-216ENST00000533908 COL5A2P05997 1499 aaPredicted RBP26.01■■□□□ 1.75
UBXN1-216ENST00000533908 ZBTB7CA1YPR0 619 aa25.99■■□□□ 1.75
UBXN1-216ENST00000533908 THRAP3Q9Y2W1 955 aaKnown RBP25.99■■□□□ 1.75
UBXN1-216ENST00000533908 NEUROD1Q13562 356 aa25.96■■□□□ 1.75
UBXN1-216ENST00000533908 AXIN2Q9Y2T1 843 aa25.96■■□□□ 1.75
UBXN1-216ENST00000533908 SLIT3O75094 1523 aa25.96■■□□□ 1.75
UBXN1-216ENST00000533908 TRPM1Q7Z4N2 1603 aa25.96■■□□□ 1.75
UBXN1-216ENST00000533908 AATKQ6ZMQ8 1374 aa25.95■■□□□ 1.75
UBXN1-216ENST00000533908 EVC2Q86UK5 1308 aa25.95■■□□□ 1.75
UBXN1-216ENST00000533908 CRB1P82279 1406 aa25.95■■□□□ 1.74
UBXN1-216ENST00000533908 PARD3Q8TEW0 1356 aa25.94■■□□□ 1.74
UBXN1-216ENST00000533908 PIK3C2AO00443 1686 aa25.93■■□□□ 1.74
UBXN1-216ENST00000533908 COL18A1P39060 1754 aa25.93■■□□□ 1.74
UBXN1-216ENST00000533908 PARP4Q9UKK3 1724 aaKnown RBP25.92■■□□□ 1.74
UBXN1-216ENST00000533908 TTC21BQ7Z4L5 1316 aa25.91■■□□□ 1.74
UBXN1-216ENST00000533908 RREB1Q92766 1687 aa25.9■■□□□ 1.74
UBXN1-216ENST00000533908 ARHGEF25Q86VW2 580 aa25.89■■□□□ 1.74
UBXN1-216ENST00000533908 ZNF692Q9BU19 519 aaPredicted RBP25.89■■□□□ 1.74
UBXN1-216ENST00000533908 ROCK2O75116 1388 aaKnown RBP25.89■■□□□ 1.74
UBXN1-216ENST00000533908 TOM1L2Q6ZVM7 507 aa25.88■■□□□ 1.73
UBXN1-216ENST00000533908 PTF1AQ7RTS3 328 aa25.88■■□□□ 1.73
UBXN1-216ENST00000533908 NUP188Q5SRE5 1749 aa25.88■■□□□ 1.73
UBXN1-216ENST00000533908 PEAK1Q9H792 1746 aa25.87■■□□□ 1.73
UBXN1-216ENST00000533908 CPSF1Q10570 1443 aaKnown RBP25.86■■□□□ 1.73
UBXN1-216ENST00000533908 WDR17Q8IZU2 1322 aa25.86■■□□□ 1.73
UBXN1-216ENST00000533908 SOX12O15370 315 aa25.85■■□□□ 1.73
UBXN1-216ENST00000533908 DDB1Q16531 1140 aa25.85■■□□□ 1.73
UBXN1-216ENST00000533908 AKAP12Q02952 1782 aa25.84■■□□□ 1.73
UBXN1-216ENST00000533908 LRRC37A3O60309 1634 aa25.84■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms