RNA–Protein interactions for RNA: ENST00000533776.1

BRCA2-205, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 3

Gene BRCA2, Length 523 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-205ENST00000533776 BEGAINQ9BUH8 593 aa7.86□□□□□ -1.15
BRCA2-205ENST00000533776 TRIM66O15016 1216 aa7.85□□□□□ -1.15
BRCA2-205ENST00000533776 PARP9Q8IXQ6 854 aa7.85□□□□□ -1.15
BRCA2-205ENST00000533776 NUDT12Q9BQG2 462 aa7.85□□□□□ -1.15
BRCA2-205ENST00000533776 ADAMTS8Q9UP79 889 aa7.85□□□□□ -1.15
BRCA2-205ENST00000533776 ADAM23O75077 832 aa7.83□□□□□ -1.16
BRCA2-205ENST00000533776 SKOR1P84550 965 aa7.83□□□□□ -1.16
BRCA2-205ENST00000533776 AK7Q96M32 723 aa7.83□□□□□ -1.16
BRCA2-205ENST00000533776 MS4A1P11836 297 aa7.82□□□□□ -1.16
BRCA2-205ENST00000533776 FOXK2Q01167 660 aa7.82□□□□□ -1.16
BRCA2-205ENST00000533776 MTMR2Q13614 643 aa7.81□□□□□ -1.16
BRCA2-205ENST00000533776 RC3H1Q5TC82 1133 aaKnown RBP7.81□□□□□ -1.16
BRCA2-205ENST00000533776 PTCRAQ6ISU1 281 aaPredicted RBP7.81□□□□□ -1.16
BRCA2-205ENST00000533776 PRR7Q8TB68 274 aa7.81□□□□□ -1.16
BRCA2-205ENST00000533776 TBC1D2Q9BYX2 928 aa7.81□□□□□ -1.16
BRCA2-205ENST00000533776 CCNYL3P0C7X3 344 aa7.8□□□□□ -1.16
BRCA2-205ENST00000533776 WNT7BP56706 349 aa7.8□□□□□ -1.16
BRCA2-205ENST00000533776 PTPRNQ16849 979 aa7.79□□□□□ -1.16
BRCA2-205ENST00000533776 RSBN1LQ6PCB5 846 aaPredicted RBP7.79□□□□□ -1.16
BRCA2-205ENST00000533776 CAPN5O15484 640 aaPredicted RBP7.78□□□□□ -1.16
BRCA2-205ENST00000533776 PDE4DQ08499 809 aa7.78□□□□□ -1.16
BRCA2-205ENST00000533776 DIXDC1Q155Q3 683 aa7.78□□□□□ -1.16
BRCA2-205ENST00000533776 ZFP42Q96MM3 310 aa7.78□□□□□ -1.16
BRCA2-205ENST00000533776 SLC24A3Q9HC58 644 aa7.78□□□□□ -1.16
BRCA2-205ENST00000533776 LINC01559Q495D7 138 aa7.77□□□□□ -1.17
BRCA2-205ENST00000533776 EHBP1Q8NDI1 1231 aa7.77□□□□□ -1.17
BRCA2-205ENST00000533776 PCDHB15Q9Y5E8 787 aa7.77□□□□□ -1.17
BRCA2-205ENST00000533776 SPDYE5A6NIY4 337 aa7.76□□□□□ -1.17
BRCA2-205ENST00000533776 CSPP1Q1MSJ5 1256 aa7.76□□□□□ -1.17
BRCA2-205ENST00000533776 UNC93B1Q9H1C4 597 aa7.76□□□□□ -1.17
BRCA2-205ENST00000533776 SPTLC1O15269 473 aa7.75□□□□□ -1.17
BRCA2-205ENST00000533776 ALDH1A1P00352 501 aa7.75□□□□□ -1.17
BRCA2-205ENST00000533776 KCNH2Q12809 1159 aa7.75□□□□□ -1.17
BRCA2-205ENST00000533776 LCE3BQ5TA77 95 aa7.75□□□□□ -1.17
BRCA2-205ENST00000533776 RIC3Q7Z5B4 369 aa7.75□□□□□ -1.17
BRCA2-205ENST00000533776 EVA1BQ9NVM1 165 aa7.75□□□□□ -1.17
BRCA2-205ENST00000533776 CFAP99D6REC4 459 aa7.74□□□□□ -1.17
BRCA2-205ENST00000533776 HRCP23327 699 aa7.74□□□□□ -1.17
BRCA2-205ENST00000533776 IRS1P35568 1242 aa7.74□□□□□ -1.17
BRCA2-205ENST00000533776 GJA5P36382 358 aa7.74□□□□□ -1.17
BRCA2-205ENST00000533776 SH3BP2P78314 561 aa7.74□□□□□ -1.17
BRCA2-205ENST00000533776 DESI1Q6ICB0 168 aa7.74□□□□□ -1.17
BRCA2-205ENST00000533776 CABLES1Q8TDN4 633 aa7.74□□□□□ -1.17
BRCA2-205ENST00000533776 ZBTB3Q9H5J0 574 aa7.74□□□□□ -1.17
BRCA2-205ENST00000533776 CTHP32929 405 aa7.73□□□□□ -1.17
BRCA2-205ENST00000533776 BAP1Q92560 729 aa7.73□□□□□ -1.17
BRCA2-205ENST00000533776 SIAH2O43255 324 aa7.72□□□□□ -1.17
BRCA2-205ENST00000533776 KRT76Q01546 638 aa7.72□□□□□ -1.17
BRCA2-205ENST00000533776 TSC1Q92574 1164 aa7.72□□□□□ -1.17
BRCA2-205ENST00000533776 LIMD1Q9UGP4 676 aa7.72□□□□□ -1.17
BRCA2-205ENST00000533776 MYSM1Q5VVJ2 828 aa7.71□□□□□ -1.18
BRCA2-205ENST00000533776 KANK3Q6NY19 840 aa7.71□□□□□ -1.18
BRCA2-205ENST00000533776 LYPD8Q6UX82 237 aa7.71□□□□□ -1.18
BRCA2-205ENST00000533776 Q8N3U1 123 aa7.71□□□□□ -1.18
BRCA2-205ENST00000533776 WASF2Q9Y6W5 498 aa7.71□□□□□ -1.18
BRCA2-205ENST00000533776 PRPF38BQ5VTL8 546 aaKnown RBP7.7□□□□□ -1.18
BRCA2-205ENST00000533776 ZNF511Q8NB15 262 aa7.7□□□□□ -1.18
BRCA2-205ENST00000533776 MAP10Q9P2G4 905 aa7.7□□□□□ -1.18
BRCA2-205ENST00000533776 TLL2Q9Y6L7 1015 aa7.7□□□□□ -1.18
BRCA2-205ENST00000533776 NUTM2BA6NNL0 878 aaPredicted RBP7.69□□□□□ -1.18
BRCA2-205ENST00000533776 SOBPA7XYQ1 873 aa7.69□□□□□ -1.18
BRCA2-205ENST00000533776 NUTM2EB1AL46 878 aaPredicted RBP7.69□□□□□ -1.18
BRCA2-205ENST00000533776 NUTM2DQ5VT03 806 aaPredicted RBP7.69□□□□□ -1.18
BRCA2-205ENST00000533776 NUTM2AQ8IVF1 878 aaPredicted RBP7.69□□□□□ -1.18
BRCA2-205ENST00000533776 KRTAP4-12Q9BQ66 201 aa7.69□□□□□ -1.18
BRCA2-205ENST00000533776 QPCTQ16769 361 aa7.68□□□□□ -1.18
BRCA2-205ENST00000533776 ZNF385CQ66K41 422 aaPredicted RBP7.68□□□□□ -1.18
BRCA2-205ENST00000533776 KRTAP9-9Q9BYP9 154 aa7.68□□□□□ -1.18
BRCA2-205ENST00000533776 KRTAP9-4Q9BYQ2 154 aa7.68□□□□□ -1.18
BRCA2-205ENST00000533776 PER1O15534 1290 aaPredicted RBP7.67□□□□□ -1.18
BRCA2-205ENST00000533776 F12P00748 615 aaPredicted RBP7.67□□□□□ -1.18
BRCA2-205ENST00000533776 MSTNO14793 375 aa7.66□□□□□ -1.18
BRCA2-205ENST00000533776 LILRB3O75022 631 aa7.66□□□□□ -1.18
BRCA2-205ENST00000533776 PPFIA3O75145 1194 aa7.66□□□□□ -1.18
BRCA2-205ENST00000533776 VARSP26640 1264 aaKnown RBP7.66□□□□□ -1.18
BRCA2-205ENST00000533776 CLK2P49760 499 aaKnown RBP7.66□□□□□ -1.18
BRCA2-205ENST00000533776 ARHGEF15O94989 841 aa7.65□□□□□ -1.18
BRCA2-205ENST00000533776 FOXJ1Q92949 421 aa7.65□□□□□ -1.18
BRCA2-205ENST00000533776 POLR3EQ9NVU0 708 aa7.65□□□□□ -1.18
BRCA2-205ENST00000533776 TUSC1Q2TAM9 212 aa7.64□□□□□ -1.19
BRCA2-205ENST00000533776 RTL5Q5HYW3 569 aaPredicted RBP7.64□□□□□ -1.19
BRCA2-205ENST00000533776 MRPL14Q6P1L8 145 aaKnown RBP7.64□□□□□ -1.19
BRCA2-205ENST00000533776 CNTNAP3BQ96NU0 1288 aa7.64□□□□□ -1.19
BRCA2-205ENST00000533776 CNTNAP3Q9BZ76 1288 aa7.64□□□□□ -1.19
BRCA2-205ENST00000533776 PLEKHG3A1L390 1219 aa7.63□□□□□ -1.19
BRCA2-205ENST00000533776 NNTQ13423 1086 aa7.63□□□□□ -1.19
BRCA2-205ENST00000533776 AGERQ15109 404 aa7.63□□□□□ -1.19
BRCA2-205ENST00000533776 GPR161Q8N6U8 529 aaKnown RBP7.63□□□□□ -1.19
BRCA2-205ENST00000533776 HELBQ8NG08 1087 aaPredicted RBP7.63□□□□□ -1.19
BRCA2-205ENST00000533776 FAM174AQ8TBP5 190 aa7.63□□□□□ -1.19
BRCA2-205ENST00000533776 SPOCK3Q9BQ16 436 aa7.63□□□□□ -1.19
BRCA2-205ENST00000533776 KRTAP4-8A0A0G2JLE6 195 aa7.62□□□□□ -1.19
BRCA2-205ENST00000533776 BCANQ96GW7 911 aa7.62□□□□□ -1.19
BRCA2-205ENST00000533776 RSPH6AQ9H0K4 717 aa7.62□□□□□ -1.19
BRCA2-205ENST00000533776 GPBP1L1Q9HC44 474 aaPredicted RBP7.62□□□□□ -1.19
BRCA2-205ENST00000533776 ITGB2P05107 769 aa7.61□□□□□ -1.19
BRCA2-205ENST00000533776 ARID5BQ14865 1188 aa7.61□□□□□ -1.19
BRCA2-205ENST00000533776 PLA2G4EQ3MJ16 856 aa7.61□□□□□ -1.19
BRCA2-205ENST00000533776 SVOPQ8N4V2 548 aa7.61□□□□□ -1.19
BRCA2-205ENST00000533776 PURBQ96QR8 312 aaKnown RBP7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms