RNA–Protein interactions for RNA: ENST00000533728.1

CHKA-207, Transcript of choline kinase alpha, humanhuman

TSL 2

Gene CHKA, Length 662 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-207ENST00000533728 COL22A1Q8NFW1 1626 aaPredicted RBP13.1□□□□□ -0.31
CHKA-207ENST00000533728 SBNO2Q9Y2G9 1366 aa13.09□□□□□ -0.31
CHKA-207ENST00000533728 SHANK3Q9BYB0 1731 aa13.08□□□□□ -0.32
CHKA-207ENST00000533728 PER1O15534 1290 aaPredicted RBP13.08□□□□□ -0.32
CHKA-207ENST00000533728 UNC5CLQ8IV45 518 aa13.08□□□□□ -0.32
CHKA-207ENST00000533728 NRKQ7Z2Y5 1582 aa13.07□□□□□ -0.32
CHKA-207ENST00000533728 ZFYVE9O95405 1425 aa13.07□□□□□ -0.32
CHKA-207ENST00000533728 NPC1L1Q9UHC9 1359 aa13.07□□□□□ -0.32
CHKA-207ENST00000533728 PNISRQ8TF01 805 aaKnown RBP13.06□□□□□ -0.32
CHKA-207ENST00000533728 SMG6Q86US8 1419 aaKnown RBP13.05□□□□□ -0.32
CHKA-207ENST00000533728 GOLGB1Q14789 3259 aaKnown RBP13.05□□□□□ -0.32
CHKA-207ENST00000533728 NLRP13Q86W25 1043 aa13.05□□□□□ -0.32
CHKA-207ENST00000533728 POLR3GLQ9BT43 218 aa13.05□□□□□ -0.32
CHKA-207ENST00000533728 ADGRB2O60241 1585 aa13.05□□□□□ -0.32
CHKA-207ENST00000533728 NUP188Q5SRE5 1749 aa13.05□□□□□ -0.32
CHKA-207ENST00000533728 PCNTO95613 3336 aa13.05□□□□□ -0.32
CHKA-207ENST00000533728 FAM83GA6ND36 823 aa13.04□□□□□ -0.32
CHKA-207ENST00000533728 FKBP8Q14318 412 aa13.04□□□□□ -0.32
CHKA-207ENST00000533728 NBPF14Q5TI25 921 aa13.04□□□□□ -0.32
CHKA-207ENST00000533728 FAM9BQ8IZU0 186 aa13.04□□□□□ -0.32
CHKA-207ENST00000533728 TMC1Q8TDI8 760 aa13.04□□□□□ -0.32
CHKA-207ENST00000533728 CAMKK2Q96RR4 588 aa13.04□□□□□ -0.32
CHKA-207ENST00000533728 RREB1Q92766 1687 aa13.04□□□□□ -0.32
CHKA-207ENST00000533728 QRICH2Q9H0J4 1663 aa13.04□□□□□ -0.32
CHKA-207ENST00000533728 PIK3C2GO75747 1445 aa13.04□□□□□ -0.32
CHKA-207ENST00000533728 NEXMIFQ5QGS0 1516 aa13.03□□□□□ -0.32
CHKA-207ENST00000533728 ONECUT3O60422 494 aaPredicted RBP13.03□□□□□ -0.32
CHKA-207ENST00000533728 A0A0G2JS52 829 aa13.02□□□□□ -0.33
CHKA-207ENST00000533728 MYT1Q01538 1121 aa13.02□□□□□ -0.33
CHKA-207ENST00000533728 SLIT2O94813 1529 aa13.02□□□□□ -0.33
CHKA-207ENST00000533728 ADGRB1O14514 1584 aa13.02□□□□□ -0.33
CHKA-207ENST00000533728 ARHGEF28Q8N1W1 1705 aaKnown RBP13.02□□□□□ -0.33
CHKA-207ENST00000533728 USP32Q8NFA0 1604 aa13.01□□□□□ -0.33
CHKA-207ENST00000533728 NRXN3Q9Y4C0 1643 aa13□□□□□ -0.33
CHKA-207ENST00000533728 SOS2Q07890 1332 aaPredicted RBP13□□□□□ -0.33
CHKA-207ENST00000533728 RIMS2Q9UQ26 1411 aa12.99□□□□□ -0.33
CHKA-207ENST00000533728 PLEKHG1Q9ULL1 1385 aa12.99□□□□□ -0.33
CHKA-207ENST00000533728 SYT17Q9BSW7 474 aa12.99□□□□□ -0.33
CHKA-207ENST00000533728 PANK3Q9H999 370 aa12.99□□□□□ -0.33
CHKA-207ENST00000533728 PUS7Q96PZ0 661 aaKnown RBP12.98□□□□□ -0.33
CHKA-207ENST00000533728 C14orf93Q9H972 538 aaKnown RBP12.98□□□□□ -0.33
CHKA-207ENST00000533728 TBX22Q9Y458 520 aa12.98□□□□□ -0.33
CHKA-207ENST00000533728 DLC1Q96QB1 1528 aa12.98□□□□□ -0.33
CHKA-207ENST00000533728 ADGRF5Q8IZF2 1346 aa12.97□□□□□ -0.33
CHKA-207ENST00000533728 HDGFP51858 240 aaKnown RBP12.97□□□□□ -0.33
CHKA-207ENST00000533728 PDE3BQ13370 1112 aa12.97□□□□□ -0.33
CHKA-207ENST00000533728 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.97□□□□□ -0.33
CHKA-207ENST00000533728 FHDC1Q9C0D6 1143 aaPredicted RBP12.97□□□□□ -0.33
CHKA-207ENST00000533728 CCDC9Q9Y3X0 531 aaKnown RBP12.97□□□□□ -0.33
CHKA-207ENST00000533728 RNF123Q5XPI4 1314 aa12.96□□□□□ -0.33
CHKA-207ENST00000533728 VPS72Q15906 364 aa12.96□□□□□ -0.33
CHKA-207ENST00000533728 FAM182BQ5T319 152 aa12.96□□□□□ -0.33
CHKA-207ENST00000533728 WWC3Q9ULE0 1092 aa12.96□□□□□ -0.33
CHKA-207ENST00000533728 NUDCQ9Y266 331 aa12.96□□□□□ -0.33
CHKA-207ENST00000533728 DNAJC5GQ8N7S2 189 aa12.95□□□□□ -0.34
CHKA-207ENST00000533728 VGFO15240 615 aaPredicted RBP12.94□□□□□ -0.34
CHKA-207ENST00000533728 APLP1P51693 650 aa12.94□□□□□ -0.34
CHKA-207ENST00000533728 CFAP70Q5T0N1 1121 aa12.94□□□□□ -0.34
CHKA-207ENST00000533728 KNSTRNQ9Y448 316 aa12.94□□□□□ -0.34
CHKA-207ENST00000533728 ADAMTS13Q76LX8 1427 aa12.94□□□□□ -0.34
CHKA-207ENST00000533728 CASZ1Q86V15 1759 aa12.94□□□□□ -0.34
CHKA-207ENST00000533728 PIK3R4Q99570 1358 aa12.94□□□□□ -0.34
CHKA-207ENST00000533728 APBA3O96018 575 aa12.93□□□□□ -0.34
CHKA-207ENST00000533728 AMER1Q5JTC6 1135 aaPredicted RBP12.93□□□□□ -0.34
CHKA-207ENST00000533728 CENPJQ9HC77 1338 aaPredicted RBP12.92□□□□□ -0.34
CHKA-207ENST00000533728 GPR162Q16538 588 aa12.92□□□□□ -0.34
CHKA-207ENST00000533728 TRIM37O94972 964 aa12.91□□□□□ -0.34
CHKA-207ENST00000533728 XRN1Q8IZH2 1706 aaKnown RBP12.91□□□□□ -0.34
CHKA-207ENST00000533728 PTGER2P43116 358 aa12.9□□□□□ -0.34
CHKA-207ENST00000533728 PPP4R2Q9NY27 417 aa12.9□□□□□ -0.34
CHKA-207ENST00000533728 AMOTL2Q9Y2J4 779 aa12.9□□□□□ -0.34
CHKA-207ENST00000533728 AATKQ6ZMQ8 1374 aa12.9□□□□□ -0.34
CHKA-207ENST00000533728 NWD2Q9ULI1 1742 aa12.9□□□□□ -0.34
CHKA-207ENST00000533728 ANKRD26Q9UPS8 1709 aa12.9□□□□□ -0.34
CHKA-207ENST00000533728 C1orf167Q5SNV9 1468 aa12.9□□□□□ -0.34
CHKA-207ENST00000533728 ADGRL3Q9HAR2 1447 aa12.89□□□□□ -0.35
CHKA-207ENST00000533728 ATP10DQ9P241 1426 aa12.89□□□□□ -0.35
CHKA-207ENST00000533728 KNDC1Q76NI1 1749 aa12.89□□□□□ -0.35
CHKA-207ENST00000533728 CHGAP10645 457 aaKnown RBP12.89□□□□□ -0.35
CHKA-207ENST00000533728 FAM98CQ17RN3 349 aaKnown RBP12.89□□□□□ -0.35
CHKA-207ENST00000533728 GPBP1L1Q9HC44 474 aaPredicted RBP12.89□□□□□ -0.35
CHKA-207ENST00000533728 PLCH1Q4KWH8 1693 aa12.89□□□□□ -0.35
CHKA-207ENST00000533728 ZBTB7AO95365 584 aa12.87□□□□□ -0.35
CHKA-207ENST00000533728 PPP2R1AP30153 589 aa12.87□□□□□ -0.35
CHKA-207ENST00000533728 CC2D1BQ5T0F9 858 aaKnown RBP12.87□□□□□ -0.35
CHKA-207ENST00000533728 NALCNQ8IZF0 1738 aa12.87□□□□□ -0.35
CHKA-207ENST00000533728 NGEFQ8N5V2 710 aa12.86□□□□□ -0.35
CHKA-207ENST00000533728 TNS2Q63HR2 1409 aa12.86□□□□□ -0.35
CHKA-207ENST00000533728 PTPRUQ92729 1446 aa12.86□□□□□ -0.35
CHKA-207ENST00000533728 NSD2O96028 1365 aa12.85□□□□□ -0.35
CHKA-207ENST00000533728 TULP4Q9NRJ4 1543 aa12.85□□□□□ -0.35
CHKA-207ENST00000533728 ORAI2Q96SN7 254 aa12.85□□□□□ -0.35
CHKA-207ENST00000533728 JMYQ8N9B5 988 aa12.84□□□□□ -0.35
CHKA-207ENST00000533728 TSHZ2Q9NRE2 1034 aa12.84□□□□□ -0.35
CHKA-207ENST00000533728 ATF5Q9Y2D1 282 aaPredicted RBP12.84□□□□□ -0.35
CHKA-207ENST00000533728 FAM161AQ3B820 660 aa12.83□□□□□ -0.36
CHKA-207ENST00000533728 EVC2Q86UK5 1308 aa12.83□□□□□ -0.36
CHKA-207ENST00000533728 POLR3AO14802 1390 aaPredicted RBP12.82□□□□□ -0.36
CHKA-207ENST00000533728 WDR90Q96KV7 1748 aa12.82□□□□□ -0.36
CHKA-207ENST00000533728 TECPR2O15040 1411 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 106.6 ms