RNA–Protein interactions for RNA: ENST00000533705.5

UBQLN1-206, Transcript of ubiquilin 1, humanhuman

TSL 1 (best)

Gene UBQLN1, Length 6,055 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN1-206ENST00000533705 TWISTNBQ3B726 338 aaPredicted RBP7.71□□□□□ -1.17
UBQLN1-206ENST00000533705 HDGFL1Q5TGJ6 251 aa7.71□□□□□ -1.17
UBQLN1-206ENST00000533705 CNTROBQ8N137 903 aa7.71□□□□□ -1.17
UBQLN1-206ENST00000533705 PNISRQ8TF01 805 aaKnown RBP7.71□□□□□ -1.17
UBQLN1-206ENST00000533705 TSHZ2Q9NRE2 1034 aa7.71□□□□□ -1.17
UBQLN1-206ENST00000533705 PPP2R1AP30153 589 aa7.71□□□□□ -1.18
UBQLN1-206ENST00000533705 ATP2B2Q01814 1243 aa7.71□□□□□ -1.18
UBQLN1-206ENST00000533705 CFTRP13569 1480 aa7.71□□□□□ -1.18
UBQLN1-206ENST00000533705 NBPF1Q3BBV0 1214 aa7.71□□□□□ -1.18
UBQLN1-206ENST00000533705 RTEL1-TNFRSF6BF6WH68 1400 aa7.71□□□□□ -1.18
UBQLN1-206ENST00000533705 MYL6BP14649 208 aa7.71□□□□□ -1.18
UBQLN1-206ENST00000533705 RBM5P52756 815 aaKnown RBP eCLIP7.71□□□□□ -1.18
UBQLN1-206ENST00000533705 CCAR2Q8N163 923 aaKnown RBP7.71□□□□□ -1.18
UBQLN1-206ENST00000533705 BRD4O60885 1362 aaPredicted RBP7.7□□□□□ -1.18
UBQLN1-206ENST00000533705 BICDL1Q6ZP65 573 aa7.7□□□□□ -1.18
UBQLN1-206ENST00000533705 CDC45O75419 566 aa7.7□□□□□ -1.18
UBQLN1-206ENST00000533705 SLC3A2P08195 630 aaKnown RBP7.7□□□□□ -1.18
UBQLN1-206ENST00000533705 PSMA5P28066 241 aa7.7□□□□□ -1.18
UBQLN1-206ENST00000533705 RRP12Q5JTH9 1297 aaKnown RBP7.7□□□□□ -1.18
UBQLN1-206ENST00000533705 CCDC73Q6ZRK6 1079 aa7.7□□□□□ -1.18
UBQLN1-206ENST00000533705 TROQ12816 1431 aaPredicted RBP7.7□□□□□ -1.18
UBQLN1-206ENST00000533705 EXOSC9Q06265 439 aaKnown RBP7.7□□□□□ -1.18
UBQLN1-206ENST00000533705 CCDC70Q6NSX1 233 aa7.7□□□□□ -1.18
UBQLN1-206ENST00000533705 ERC1Q8IUD2 1116 aa7.7□□□□□ -1.18
UBQLN1-206ENST00000533705 RPGRIP1LQ68CZ1 1315 aa7.7□□□□□ -1.18
UBQLN1-206ENST00000533705 CCDC158Q5M9N0 1113 aa7.7□□□□□ -1.18
UBQLN1-206ENST00000533705 TTC39AQ5SRH9 613 aa7.7□□□□□ -1.18
UBQLN1-206ENST00000533705 MPHOSPH8Q99549 860 aa7.7□□□□□ -1.18
UBQLN1-206ENST00000533705 TMEM132AQ24JP5 1023 aa7.69□□□□□ -1.18
UBQLN1-206ENST00000533705 SNAPC4Q5SXM2 1469 aa7.69□□□□□ -1.18
UBQLN1-206ENST00000533705 ADAMTS2O95450 1211 aa7.69□□□□□ -1.18
UBQLN1-206ENST00000533705 SLC4A2P04920 1241 aa7.69□□□□□ -1.18
UBQLN1-206ENST00000533705 NUCB2P80303 420 aa7.69□□□□□ -1.18
UBQLN1-206ENST00000533705 GNAI2P04899 355 aa7.69□□□□□ -1.18
UBQLN1-206ENST00000533705 CHMP5Q9NZZ3 219 aa7.69□□□□□ -1.18
UBQLN1-206ENST00000533705 HIP1O00291 1037 aa7.68□□□□□ -1.18
UBQLN1-206ENST00000533705 ATP2B1P20020 1258 aa7.68□□□□□ -1.18
UBQLN1-206ENST00000533705 C22orf23Q9BZE7 217 aa7.68□□□□□ -1.18
UBQLN1-206ENST00000533705 KIAA1107Q9UPP5 1409 aa7.68□□□□□ -1.18
UBQLN1-206ENST00000533705 RRS1Q15050 365 aaKnown RBP7.68□□□□□ -1.18
UBQLN1-206ENST00000533705 SASS6Q6UVJ0 657 aa7.68□□□□□ -1.18
UBQLN1-206ENST00000533705 SIL1Q9H173 461 aa7.68□□□□□ -1.18
UBQLN1-206ENST00000533705 STK11IPQ8N1F8 1099 aa7.68□□□□□ -1.18
UBQLN1-206ENST00000533705 HMGB2P26583 209 aaKnown RBP7.67□□□□□ -1.18
UBQLN1-206ENST00000533705 CCDC57Q2TAC2 916 aa7.67□□□□□ -1.18
UBQLN1-206ENST00000533705 CT47A1Q5JQC4 288 aaPredicted RBP7.67□□□□□ -1.18
UBQLN1-206ENST00000533705 SRCIN1Q9C0H9 1055 aa7.67□□□□□ -1.18
UBQLN1-206ENST00000533705 DDX24Q9GZR7 859 aaKnown RBP eCLIP7.67□□□□□ -1.18
UBQLN1-206ENST00000533705 FBXO3Q9UK99 471 aa7.67□□□□□ -1.18
UBQLN1-206ENST00000533705 ANKRD30BQ9BXX2 1392 aa7.67□□□□□ -1.18
UBQLN1-206ENST00000533705 TOPBP1Q92547 1522 aa7.67□□□□□ -1.18
UBQLN1-206ENST00000533705 ZSCAN29Q8IWY8 852 aaPredicted RBP7.67□□□□□ -1.18
UBQLN1-206ENST00000533705 ERBINQ96RT1 1412 aa7.67□□□□□ -1.18
UBQLN1-206ENST00000533705 WWC2Q6AWC2 1192 aa7.67□□□□□ -1.18
UBQLN1-206ENST00000533705 ATAD2Q6PL18 1390 aa7.67□□□□□ -1.18
UBQLN1-206ENST00000533705 NGLY1Q96IV0 654 aa7.67□□□□□ -1.18
UBQLN1-206ENST00000533705 BTBD11A6QL63 1104 aa7.66□□□□□ -1.18
UBQLN1-206ENST00000533705 CCT4P50991 539 aaKnown RBP7.66□□□□□ -1.18
UBQLN1-206ENST00000533705 ZSCAN21Q9Y5A6 473 aaPredicted RBP7.66□□□□□ -1.18
UBQLN1-206ENST00000533705 ERICH3Q5RHP9 1530 aa7.66□□□□□ -1.18
UBQLN1-206ENST00000533705 EFCAB5A4FU69 1503 aa7.66□□□□□ -1.18
UBQLN1-206ENST00000533705 ODF2Q5BJF6 829 aa7.66□□□□□ -1.18
UBQLN1-206ENST00000533705 TSR2Q969E8 191 aaKnown RBP7.66□□□□□ -1.18
UBQLN1-206ENST00000533705 C1orf115Q9H7X2 142 aa7.66□□□□□ -1.18
UBQLN1-206ENST00000533705 ARAP1Q96P48 1450 aa7.66□□□□□ -1.18
UBQLN1-206ENST00000533705 NUDT16Q96DE0 195 aaKnown RBP7.66□□□□□ -1.18
UBQLN1-206ENST00000533705 NACAP1Q9BZK3 213 aa7.66□□□□□ -1.18
UBQLN1-206ENST00000533705 CCDC61Q9Y6R9 512 aa7.66□□□□□ -1.18
UBQLN1-206ENST00000533705 EHBP1L1Q8N3D4 1523 aa7.66□□□□□ -1.18
UBQLN1-206ENST00000533705 EPS15P42566 896 aa7.66□□□□□ -1.18
UBQLN1-206ENST00000533705 KCNH5Q8NCM2 988 aa7.66□□□□□ -1.18
UBQLN1-206ENST00000533705 POLA1P09884 1462 aaPredicted RBP7.66□□□□□ -1.18
UBQLN1-206ENST00000533705 PTCD1O75127 700 aaKnown RBP7.65□□□□□ -1.18
UBQLN1-206ENST00000533705 CCDC85AQ96PX6 553 aaPredicted RBP7.65□□□□□ -1.18
UBQLN1-206ENST00000533705 STARD3NLO95772 234 aa7.65□□□□□ -1.18
UBQLN1-206ENST00000533705 CEBPAP49715 358 aaPredicted RBP7.65□□□□□ -1.18
UBQLN1-206ENST00000533705 NAP1L1P55209 391 aaKnown RBP7.65□□□□□ -1.18
UBQLN1-206ENST00000533705 ZNF592Q92610 1267 aa7.65□□□□□ -1.18
UBQLN1-206ENST00000533705 CDCA7LQ96GN5 454 aa7.65□□□□□ -1.18
UBQLN1-206ENST00000533705 SDF4Q9BRK5 362 aa7.65□□□□□ -1.18
UBQLN1-206ENST00000533705 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.65□□□□□ -1.18
UBQLN1-206ENST00000533705 CC2D2AQ9P2K1 1620 aa7.65□□□□□ -1.18
UBQLN1-206ENST00000533705 OFD1O75665 1012 aa7.65□□□□□ -1.19
UBQLN1-206ENST00000533705 ZFYVE27Q5T4F4 411 aa7.65□□□□□ -1.19
UBQLN1-206ENST00000533705 HOMER1Q86YM7 354 aa7.65□□□□□ -1.19
UBQLN1-206ENST00000533705 NOB1Q9ULX3 412 aaKnown RBP7.65□□□□□ -1.19
UBQLN1-206ENST00000533705 OLFM4Q6UX06 510 aa7.65□□□□□ -1.19
UBQLN1-206ENST00000533705 GCC1Q96CN9 775 aa7.65□□□□□ -1.19
UBQLN1-206ENST00000533705 CDK5RAP3Q96JB5 506 aa7.65□□□□□ -1.19
UBQLN1-206ENST00000533705 FKBP4Q02790 459 aaKnown RBP eCLIP7.64□□□□□ -1.19
UBQLN1-206ENST00000533705 WAPLQ7Z5K2 1190 aa7.64□□□□□ -1.19
UBQLN1-206ENST00000533705 PAF1Q8N7H5 531 aa7.64□□□□□ -1.19
UBQLN1-206ENST00000533705 FOXO3O43524 673 aa7.64□□□□□ -1.19
UBQLN1-206ENST00000533705 ZPR1O75312 459 aa7.64□□□□□ -1.19
UBQLN1-206ENST00000533705 GPS2Q13227 327 aa7.64□□□□□ -1.19
UBQLN1-206ENST00000533705 TMOD3Q9NYL9 352 aa7.64□□□□□ -1.19
UBQLN1-206ENST00000533705 KRT18P05783 430 aaKnown RBP7.64□□□□□ -1.19
UBQLN1-206ENST00000533705 CEP126Q9P2H0 1117 aa7.64□□□□□ -1.19
UBQLN1-206ENST00000533705 CD109Q6YHK3 1445 aa7.63□□□□□ -1.19
UBQLN1-206ENST00000533705 IGHMBP2P38935 993 aaKnown RBP7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms