RNA–Protein interactions for RNA: ENST00000532918.4

COLCA1-203, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best)

Gene COLCA1, Length 5,366 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-203ENST00000532918 KIF7Q2M1P5 1343 aa13□□□□□ -0.33
COLCA1-203ENST00000532918 SAMD1Q6SPF0 538 aaPredicted RBP13□□□□□ -0.33
COLCA1-203ENST00000532918 CLASRPQ8N2M8 674 aaKnown RBP13□□□□□ -0.33
COLCA1-203ENST00000532918 PLB1Q6P1J6 1458 aa12.99□□□□□ -0.33
COLCA1-203ENST00000532918 FYB1O15117 783 aa12.99□□□□□ -0.33
COLCA1-203ENST00000532918 ANKRD20A12PQ8NF67 263 aa12.99□□□□□ -0.33
COLCA1-203ENST00000532918 R3HCC1Q9Y3T6 440 aaKnown RBP12.99□□□□□ -0.33
COLCA1-203ENST00000532918 CCDC61Q9Y6R9 512 aa12.99□□□□□ -0.33
COLCA1-203ENST00000532918 CUL7Q14999 1698 aa12.99□□□□□ -0.33
COLCA1-203ENST00000532918 TEX14Q8IWB6 1497 aa12.99□□□□□ -0.33
COLCA1-203ENST00000532918 CCDC158Q5M9N0 1113 aa12.98□□□□□ -0.33
COLCA1-203ENST00000532918 INTS3Q68E01 1043 aaKnown RBP12.98□□□□□ -0.33
COLCA1-203ENST00000532918 SUPT6HQ7KZ85 1726 aaKnown RBP12.98□□□□□ -0.33
COLCA1-203ENST00000532918 HIP1O00291 1037 aa12.98□□□□□ -0.33
COLCA1-203ENST00000532918 SULT6B1Q6IMI4 303 aa12.98□□□□□ -0.33
COLCA1-203ENST00000532918 STARD3NLO95772 234 aa12.98□□□□□ -0.33
COLCA1-203ENST00000532918 ZNF652Q9Y2D9 606 aa12.98□□□□□ -0.33
COLCA1-203ENST00000532918 BRD4O60885 1362 aaPredicted RBP12.97□□□□□ -0.33
COLCA1-203ENST00000532918 HDGFL1Q5TGJ6 251 aa12.97□□□□□ -0.33
COLCA1-203ENST00000532918 ARAP1Q96P48 1450 aa12.97□□□□□ -0.33
COLCA1-203ENST00000532918 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.97□□□□□ -0.33
COLCA1-203ENST00000532918 NUDT16Q96DE0 195 aaKnown RBP12.97□□□□□ -0.33
COLCA1-203ENST00000532918 NGLY1Q96IV0 654 aa12.97□□□□□ -0.33
COLCA1-203ENST00000532918 CNTROBQ8N137 903 aa12.97□□□□□ -0.33
COLCA1-203ENST00000532918 MPHOSPH8Q99549 860 aa12.96□□□□□ -0.33
COLCA1-203ENST00000532918 KIF14Q15058 1648 aa12.96□□□□□ -0.33
COLCA1-203ENST00000532918 FAM161AQ3B820 660 aa12.96□□□□□ -0.33
COLCA1-203ENST00000532918 TOM1O60784 492 aa12.96□□□□□ -0.33
COLCA1-203ENST00000532918 WWC2Q6AWC2 1192 aa12.96□□□□□ -0.33
COLCA1-203ENST00000532918 RBM19Q9Y4C8 960 aaKnown RBP12.96□□□□□ -0.34
COLCA1-203ENST00000532918 TTC39AQ5SRH9 613 aa12.95□□□□□ -0.34
COLCA1-203ENST00000532918 TCP11L2Q8N4U5 519 aa12.95□□□□□ -0.34
COLCA1-203ENST00000532918 WDHD1O75717 1129 aaPredicted RBP12.95□□□□□ -0.34
COLCA1-203ENST00000532918 PSMA5P28066 241 aa12.95□□□□□ -0.34
COLCA1-203ENST00000532918 ZC3H6P61129 1189 aaKnown RBP12.95□□□□□ -0.34
COLCA1-203ENST00000532918 CRBNQ96SW2 442 aa12.95□□□□□ -0.34
COLCA1-203ENST00000532918 FSD1Q9BTV5 496 aa12.95□□□□□ -0.34
COLCA1-203ENST00000532918 FOXD4L1Q9NU39 408 aa12.95□□□□□ -0.34
COLCA1-203ENST00000532918 TWISTNBQ3B726 338 aaPredicted RBP12.94□□□□□ -0.34
COLCA1-203ENST00000532918 SLC12A5Q9H2X9 1139 aa12.94□□□□□ -0.34
COLCA1-203ENST00000532918 DDX11L8A8MPP1 907 aa12.94□□□□□ -0.34
COLCA1-203ENST00000532918 GOLGA6L19H0YKK7 550 aa12.94□□□□□ -0.34
COLCA1-203ENST00000532918 PPP2R1AP30153 589 aa12.94□□□□□ -0.34
COLCA1-203ENST00000532918 CADPS2Q86UW7 1296 aa12.94□□□□□ -0.34
COLCA1-203ENST00000532918 CCT4P50991 539 aaKnown RBP12.94□□□□□ -0.34
COLCA1-203ENST00000532918 PHF8Q9UPP1 1060 aa12.94□□□□□ -0.34
COLCA1-203ENST00000532918 A0A0U1RQG5 324 aaPredicted RBP12.93□□□□□ -0.34
COLCA1-203ENST00000532918 BECN2A8MW95 431 aa12.93□□□□□ -0.34
COLCA1-203ENST00000532918 SURF6O75683 361 aaKnown RBP12.93□□□□□ -0.34
COLCA1-203ENST00000532918 XPCQ01831 940 aaPredicted RBP12.93□□□□□ -0.34
COLCA1-203ENST00000532918 ZSCAN25Q6NSZ9 544 aa12.93□□□□□ -0.34
COLCA1-203ENST00000532918 TMOD3Q9NYL9 352 aa12.93□□□□□ -0.34
COLCA1-203ENST00000532918 ARHGEF11O15085 1522 aa12.93□□□□□ -0.34
COLCA1-203ENST00000532918 ZPR1O75312 459 aa12.93□□□□□ -0.34
COLCA1-203ENST00000532918 CCDC57Q2TAC2 916 aa12.93□□□□□ -0.34
COLCA1-203ENST00000532918 NACAP1Q9BZK3 213 aa12.93□□□□□ -0.34
COLCA1-203ENST00000532918 TMOD2Q9NZR1 351 aa12.93□□□□□ -0.34
COLCA1-203ENST00000532918 GOLGA6L3A6NEY3 463 aa12.92□□□□□ -0.34
COLCA1-203ENST00000532918 BTBD11A6QL63 1104 aa12.92□□□□□ -0.34
COLCA1-203ENST00000532918 GNAI2P04899 355 aa12.92□□□□□ -0.34
COLCA1-203ENST00000532918 AMOTL2Q9Y2J4 779 aa12.92□□□□□ -0.34
COLCA1-203ENST00000532918 AMOTQ4VCS5 1084 aa12.92□□□□□ -0.34
COLCA1-203ENST00000532918 RBM5P52756 815 aaKnown RBP eCLIP12.92□□□□□ -0.34
COLCA1-203ENST00000532918 PDE4CQ08493 712 aa12.92□□□□□ -0.34
COLCA1-203ENST00000532918 ADAMTS2O95450 1211 aa12.91□□□□□ -0.34
COLCA1-203ENST00000532918 SRCIN1Q9C0H9 1055 aa12.91□□□□□ -0.34
COLCA1-203ENST00000532918 IPO7O95373 1038 aaKnown RBP12.91□□□□□ -0.34
COLCA1-203ENST00000532918 CT47B1P0C2W7 299 aaPredicted RBP12.91□□□□□ -0.34
COLCA1-203ENST00000532918 IGHMBP2P38935 993 aaKnown RBP12.91□□□□□ -0.34
COLCA1-203ENST00000532918 NBPF1Q3BBV0 1214 aa12.91□□□□□ -0.34
COLCA1-203ENST00000532918 PRKCSHP14314 528 aaPredicted RBP12.91□□□□□ -0.34
COLCA1-203ENST00000532918 PCMTD1Q96MG8 357 aaPredicted RBP12.9□□□□□ -0.34
COLCA1-203ENST00000532918 SKOR2Q2VWA4 1001 aaPredicted RBP12.9□□□□□ -0.34
COLCA1-203ENST00000532918 DNAJC2Q99543 621 aaKnown RBP12.9□□□□□ -0.34
COLCA1-203ENST00000532918 SMC3Q9UQE7 1217 aa12.9□□□□□ -0.34
COLCA1-203ENST00000532918 FOXD4L5Q5VV16 416 aaPredicted RBP12.9□□□□□ -0.34
COLCA1-203ENST00000532918 FOXD4L4Q8WXT5 416 aaPredicted RBP12.9□□□□□ -0.34
COLCA1-203ENST00000532918 MSH6P52701 1360 aa12.9□□□□□ -0.34
COLCA1-203ENST00000532918 CDK13Q14004 1512 aaKnown RBP12.89□□□□□ -0.35
COLCA1-203ENST00000532918 GZF1Q9H116 711 aaPredicted RBP12.89□□□□□ -0.35
COLCA1-203ENST00000532918 EXOC5O00471 708 aa12.89□□□□□ -0.35
COLCA1-203ENST00000532918 SLC4A2P04920 1241 aa12.89□□□□□ -0.35
COLCA1-203ENST00000532918 TIAM1Q13009 1591 aa12.89□□□□□ -0.35
COLCA1-203ENST00000532918 ZNF771Q7L3S4 317 aaPredicted RBP12.89□□□□□ -0.35
COLCA1-203ENST00000532918 EXOC6Q8TAG9 804 aa12.89□□□□□ -0.35
COLCA1-203ENST00000532918 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.89□□□□□ -0.35
COLCA1-203ENST00000532918 FANCAO15360 1455 aa12.89□□□□□ -0.35
COLCA1-203ENST00000532918 GNAT3A8MTJ3 354 aa12.89□□□□□ -0.35
COLCA1-203ENST00000532918 FCHSD2O94868 740 aa12.89□□□□□ -0.35
COLCA1-203ENST00000532918 ADAMTS8Q9UP79 889 aa12.89□□□□□ -0.35
COLCA1-203ENST00000532918 CDC45O75419 566 aa12.88□□□□□ -0.35
COLCA1-203ENST00000532918 MYL6BP14649 208 aa12.88□□□□□ -0.35
COLCA1-203ENST00000532918 HMGB1P09429 215 aaKnown RBP12.88□□□□□ -0.35
COLCA1-203ENST00000532918 TNRQ92752 1358 aa12.87□□□□□ -0.35
COLCA1-203ENST00000532918 UBAP1LF5GYI3 381 aa12.87□□□□□ -0.35
COLCA1-203ENST00000532918 HSP90AB3PQ58FF7 597 aa12.87□□□□□ -0.35
COLCA1-203ENST00000532918 TMEM132AQ24JP5 1023 aa12.87□□□□□ -0.35
COLCA1-203ENST00000532918 BICRAQ9NZM4 1560 aa12.87□□□□□ -0.35
COLCA1-203ENST00000532918 CEBPAP49715 358 aaPredicted RBP12.87□□□□□ -0.35
COLCA1-203ENST00000532918 EXOSC9Q06265 439 aaKnown RBP12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms