RNA–Protein interactions for RNA: ENST00000532661.5

LTBP3-220, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 3

Gene LTBP3, Length 748 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-220ENST00000532661 VPS72Q15906 364 aa33.07■■■□□ 2.88
LTBP3-220ENST00000532661 NBPF8Q3BBV2 869 aa33.07■■■□□ 2.88
LTBP3-220ENST00000532661 CABP2Q9NPB3 220 aa33.07■■■□□ 2.88
LTBP3-220ENST00000532661 POLR3AO14802 1390 aaPredicted RBP33.07■■■□□ 2.88
LTBP3-220ENST00000532661 PLCH1Q4KWH8 1693 aa33.06■■■□□ 2.88
LTBP3-220ENST00000532661 TOPAZ1Q8N9V7 1692 aa33.04■■■□□ 2.88
LTBP3-220ENST00000532661 CCDC9Q9Y3X0 531 aaKnown RBP33.04■■■□□ 2.88
LTBP3-220ENST00000532661 NUTM2GQ5VZR2 741 aa33.03■■■□□ 2.88
LTBP3-220ENST00000532661 TRPM1Q7Z4N2 1603 aa33.02■■■□□ 2.88
LTBP3-220ENST00000532661 BTG4Q9NY30 223 aa33.02■■■□□ 2.88
LTBP3-220ENST00000532661 NWD2Q9ULI1 1742 aa33.01■■■□□ 2.87
LTBP3-220ENST00000532661 ROCK2O75116 1388 aaKnown RBP33■■■□□ 2.87
LTBP3-220ENST00000532661 QRICH2Q9H0J4 1663 aa33■■■□□ 2.87
LTBP3-220ENST00000532661 PPIP5K1Q6PFW1 1433 aa32.99■■■□□ 2.87
LTBP3-220ENST00000532661 CRYBG1Q9Y4K1 1723 aa32.98■■■□□ 2.87
LTBP3-220ENST00000532661 SEPT12Q8IYM1 358 aa32.97■■■□□ 2.87
LTBP3-220ENST00000532661 TRIM26Q12899 539 aaPredicted RBP32.96■■■□□ 2.87
LTBP3-220ENST00000532661 EP400Q96L91 3159 aa32.96■■■□□ 2.87
LTBP3-220ENST00000532661 PRDM11Q9NQV5 511 aa32.95■■■□□ 2.87
LTBP3-220ENST00000532661 ONECUT3O60422 494 aaPredicted RBP32.94■■■□□ 2.86
LTBP3-220ENST00000532661 CABP1Q9NZU7 370 aa32.94■■■□□ 2.86
LTBP3-220ENST00000532661 COL14A1Q05707 1796 aaKnown RBP32.93■■■□□ 2.86
LTBP3-220ENST00000532661 ABTB2Q8N961 1025 aa32.93■■■□□ 2.86
LTBP3-220ENST00000532661 KIAA0232Q92628 1395 aa32.93■■■□□ 2.86
LTBP3-220ENST00000532661 NRAPQ86VF7 1730 aa32.92■■■□□ 2.86
LTBP3-220ENST00000532661 CHRNA2Q15822 529 aa32.92■■■□□ 2.86
LTBP3-220ENST00000532661 ZC3H6P61129 1189 aaKnown RBP32.91■■■□□ 2.86
LTBP3-220ENST00000532661 EVC2Q86UK5 1308 aa32.9■■■□□ 2.86
LTBP3-220ENST00000532661 FAM98CQ17RN3 349 aaKnown RBP32.88■■■□□ 2.85
LTBP3-220ENST00000532661 PHRF1Q9P1Y6 1649 aaKnown RBP32.88■■■□□ 2.85
LTBP3-220ENST00000532661 BRWD3Q6RI45 1802 aa32.86■■■□□ 2.85
LTBP3-220ENST00000532661 A0A0G2JS52 829 aa32.85■■■□□ 2.85
LTBP3-220ENST00000532661 MYT1Q01538 1121 aa32.85■■■□□ 2.85
LTBP3-220ENST00000532661 TONSLQ96HA7 1378 aa32.84■■■□□ 2.85
LTBP3-220ENST00000532661 SPATA31A5Q5VU36 1347 aa32.84■■■□□ 2.85
LTBP3-220ENST00000532661 SPATA31A7Q8IWB4 1347 aa32.84■■■□□ 2.85
LTBP3-220ENST00000532661 USP19O94966 1318 aa32.83■■■□□ 2.85
LTBP3-220ENST00000532661 CCDC125Q86Z20 511 aa32.83■■■□□ 2.85
LTBP3-220ENST00000532661 KRT27Q7Z3Y8 459 aa32.82■■■□□ 2.84
LTBP3-220ENST00000532661 CARD11Q9BXL7 1154 aa32.82■■■□□ 2.84
LTBP3-220ENST00000532661 USP6P35125 1406 aa32.82■■■□□ 2.84
LTBP3-220ENST00000532661 NLRP13Q86W25 1043 aa32.81■■■□□ 2.84
LTBP3-220ENST00000532661 STRN4Q9NRL3 753 aa32.81■■■□□ 2.84
LTBP3-220ENST00000532661 BRD4O60885 1362 aaPredicted RBP32.79■■■□□ 2.84
LTBP3-220ENST00000532661 NRKQ7Z2Y5 1582 aa32.79■■■□□ 2.84
LTBP3-220ENST00000532661 GCP02774 474 aa32.78■■■□□ 2.84
LTBP3-220ENST00000532661 BLMP54132 1417 aaPredicted RBP32.76■■■□□ 2.83
LTBP3-220ENST00000532661 SSH2Q76I76 1423 aa32.76■■■□□ 2.83
LTBP3-220ENST00000532661 NLRP6P59044 892 aa32.75■■■□□ 2.83
LTBP3-220ENST00000532661 SPATA31A1Q5TZJ5 1347 aa32.75■■■□□ 2.83
LTBP3-220ENST00000532661 CPDO75976 1380 aa32.74■■■□□ 2.83
LTBP3-220ENST00000532661 EVA1CP58658 441 aa32.72■■■□□ 2.83
LTBP3-220ENST00000532661 CAMTA1Q9Y6Y1 1673 aa32.72■■■□□ 2.83
LTBP3-220ENST00000532661 FAM182BQ5T319 152 aa32.71■■■□□ 2.83
LTBP3-220ENST00000532661 DEFB132Q7Z7B7 95 aa32.71■■■□□ 2.83
LTBP3-220ENST00000532661 ZNF692Q9BU19 519 aaPredicted RBP32.7■■■□□ 2.83
LTBP3-220ENST00000532661 USP35Q9P2H5 1018 aa32.7■■■□□ 2.83
LTBP3-220ENST00000532661 SBNO2Q9Y2G9 1366 aa32.7■■■□□ 2.82
LTBP3-220ENST00000532661 LARP1Q6PKG0 1096 aaKnown RBP32.69■■■□□ 2.82
LTBP3-220ENST00000532661 TTC21BQ7Z4L5 1316 aa32.69■■■□□ 2.82
LTBP3-220ENST00000532661 ZBTB7CA1YPR0 619 aa32.68■■■□□ 2.82
LTBP3-220ENST00000532661 THSD7AQ9UPZ6 1657 aa32.66■■■□□ 2.82
LTBP3-220ENST00000532661 SF3B2Q13435 895 aaKnown RBP32.66■■■□□ 2.82
LTBP3-220ENST00000532661 LMO7Q8WWI1 1683 aa32.66■■■□□ 2.82
LTBP3-220ENST00000532661 CPSF1Q10570 1443 aaKnown RBP32.65■■■□□ 2.82
LTBP3-220ENST00000532661 PIK3C2AO00443 1686 aa32.65■■■□□ 2.82
LTBP3-220ENST00000532661 SLIT3O75094 1523 aa32.64■■■□□ 2.82
LTBP3-220ENST00000532661 ZRANB1Q9UGI0 708 aa32.63■■■□□ 2.81
LTBP3-220ENST00000532661 KTN1Q86UP2 1357 aaKnown RBP32.62■■■□□ 2.81
LTBP3-220ENST00000532661 AKAP12Q02952 1782 aa32.6■■■□□ 2.81
LTBP3-220ENST00000532661 TTC21AQ8NDW8 1320 aa32.59■■■□□ 2.81
LTBP3-220ENST00000532661 BARGINQ6ZT62 677 aa32.59■■■□□ 2.81
LTBP3-220ENST00000532661 TMC1Q8TDI8 760 aa32.59■■■□□ 2.81
LTBP3-220ENST00000532661 COL5A2P05997 1499 aaPredicted RBP32.59■■■□□ 2.81
LTBP3-220ENST00000532661 AATKQ6ZMQ8 1374 aa32.58■■■□□ 2.81
LTBP3-220ENST00000532661 SOX12O15370 315 aa32.58■■■□□ 2.81
LTBP3-220ENST00000532661 TCP11L2Q8N4U5 519 aa32.57■■■□□ 2.8
LTBP3-220ENST00000532661 SLC12A5Q9H2X9 1139 aa32.57■■■□□ 2.8
LTBP3-220ENST00000532661 CD163L1Q9NR16 1453 aa32.55■■■□□ 2.8
LTBP3-220ENST00000532661 ST20-MTHFSA0A0A6YYL1 179 aa32.55■■■□□ 2.8
LTBP3-220ENST00000532661 SUGP2Q8IX01 1082 aaKnown RBP eCLIP32.55■■■□□ 2.8
LTBP3-220ENST00000532661 AXIN2Q9Y2T1 843 aa32.55■■■□□ 2.8
LTBP3-220ENST00000532661 TESK2Q96S53 571 aa32.54■■■□□ 2.8
LTBP3-220ENST00000532661 ARHGEF25Q86VW2 580 aa32.53■■■□□ 2.8
LTBP3-220ENST00000532661 BAG6P46379 1132 aa32.52■■■□□ 2.8
LTBP3-220ENST00000532661 KCNH5Q8NCM2 988 aa32.52■■■□□ 2.8
LTBP3-220ENST00000532661 THRAP3Q9Y2W1 955 aaKnown RBP32.51■■■□□ 2.79
LTBP3-220ENST00000532661 SRCAPQ6ZRS2 3230 aa32.51■■■□□ 2.79
LTBP3-220ENST00000532661 NME9Q86XW9 330 aa32.5■■■□□ 2.79
LTBP3-220ENST00000532661 CRB1P82279 1406 aa32.5■■■□□ 2.79
LTBP3-220ENST00000532661 MON2Q7Z3U7 1717 aa32.49■■■□□ 2.79
LTBP3-220ENST00000532661 PDE3BQ13370 1112 aa32.49■■■□□ 2.79
LTBP3-220ENST00000532661 HDGFL2Q7Z4V5 671 aaPredicted RBP32.49■■■□□ 2.79
LTBP3-220ENST00000532661 COL18A1P39060 1754 aa32.49■■■□□ 2.79
LTBP3-220ENST00000532661 EN1Q05925 392 aaPredicted RBP32.48■■■□□ 2.79
LTBP3-220ENST00000532661 FAM196AQ6ZSG2 479 aa32.48■■■□□ 2.79
LTBP3-220ENST00000532661 PUS7Q96PZ0 661 aaKnown RBP32.47■■■□□ 2.79
LTBP3-220ENST00000532661 TRIM37O94972 964 aa32.46■■■□□ 2.79
LTBP3-220ENST00000532661 TOM1L2Q6ZVM7 507 aa32.46■■■□□ 2.79
LTBP3-220ENST00000532661 PCGF6Q9BYE7 350 aa32.46■■■□□ 2.79
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms