RNA–Protein interactions for RNA: ENST00000532540.5

TGFBR3-209, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 1 (best)

Gene TGFBR3, Length 3,913 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-209ENST00000532540 ZNF330Q9Y3S2 320 aaPredicted RBP8.44□□□□□ -1.06
TGFBR3-209ENST00000532540 RPRD2Q5VT52 1461 aaKnown RBP8.44□□□□□ -1.06
TGFBR3-209ENST00000532540 WASLO00401 505 aaPredicted RBP8.43□□□□□ -1.06
TGFBR3-209ENST00000532540 CCDC173Q0VFZ6 552 aa8.43□□□□□ -1.06
TGFBR3-209ENST00000532540 NLRP2Q9NX02 1062 aa8.43□□□□□ -1.06
TGFBR3-209ENST00000532540 PLEKHH1Q9ULM0 1364 aa8.43□□□□□ -1.06
TGFBR3-209ENST00000532540 SYTL4Q96C24 671 aaPredicted RBP8.43□□□□□ -1.06
TGFBR3-209ENST00000532540 PHF8Q9UPP1 1060 aa8.43□□□□□ -1.06
TGFBR3-209ENST00000532540 LMTK3Q96Q04 1460 aa8.43□□□□□ -1.06
TGFBR3-209ENST00000532540 PLIN1O60240 522 aa8.43□□□□□ -1.06
TGFBR3-209ENST00000532540 XRCC6P12956 609 aaKnown RBP eCLIP8.43□□□□□ -1.06
TGFBR3-209ENST00000532540 ZSCAN30Q86W11 494 aa8.43□□□□□ -1.06
TGFBR3-209ENST00000532540 METP08581 1390 aa8.43□□□□□ -1.06
TGFBR3-209ENST00000532540 NASPP49321 788 aaPredicted RBP8.42□□□□□ -1.06
TGFBR3-209ENST00000532540 PHF23Q9BUL5 403 aaPredicted RBP8.42□□□□□ -1.06
TGFBR3-209ENST00000532540 PRDM15P57071 1507 aaPredicted RBP8.42□□□□□ -1.06
TGFBR3-209ENST00000532540 CCDC66A2RUB6 948 aa8.42□□□□□ -1.06
TGFBR3-209ENST00000532540 PAXIP1Q6ZW49 1069 aaPredicted RBP8.42□□□□□ -1.06
TGFBR3-209ENST00000532540 MAGI2Q86UL8 1455 aa8.41□□□□□ -1.06
TGFBR3-209ENST00000532540 MAPK8IP3Q9UPT6 1336 aa8.41□□□□□ -1.06
TGFBR3-209ENST00000532540 ARAP3Q8WWN8 1544 aa8.41□□□□□ -1.06
TGFBR3-209ENST00000532540 MCM4P33991 863 aa8.41□□□□□ -1.06
TGFBR3-209ENST00000532540 PLCB2Q00722 1185 aa8.41□□□□□ -1.06
TGFBR3-209ENST00000532540 CCDC184Q52MB2 194 aa8.41□□□□□ -1.06
TGFBR3-209ENST00000532540 PRDM11Q9NQV5 511 aa8.41□□□□□ -1.06
TGFBR3-209ENST00000532540 DDX49Q9Y6V7 483 aaKnown RBP8.41□□□□□ -1.06
TGFBR3-209ENST00000532540 CGNL1Q0VF96 1302 aa8.41□□□□□ -1.06
TGFBR3-209ENST00000532540 CNTLNQ9NXG0 1405 aa8.41□□□□□ -1.06
TGFBR3-209ENST00000532540 ARHGEF5Q12774 1597 aa8.41□□□□□ -1.06
TGFBR3-209ENST00000532540 PLA2R1Q13018 1463 aa8.41□□□□□ -1.06
TGFBR3-209ENST00000532540 CCDC7Q96M83 1385 aa8.41□□□□□ -1.06
TGFBR3-209ENST00000532540 MTHFSP49914 203 aa8.41□□□□□ -1.06
TGFBR3-209ENST00000532540 USHBP1Q8N6Y0 703 aa8.4□□□□□ -1.06
TGFBR3-209ENST00000532540 GPRASP1Q5JY77 1395 aa8.4□□□□□ -1.06
TGFBR3-209ENST00000532540 ELL2O00472 640 aaPredicted RBP8.4□□□□□ -1.06
TGFBR3-209ENST00000532540 MAPK8IP2Q13387 824 aaPredicted RBP8.4□□□□□ -1.06
TGFBR3-209ENST00000532540 KRT28Q7Z3Y7 464 aa8.4□□□□□ -1.06
TGFBR3-209ENST00000532540 ZNF428Q96B54 188 aa8.4□□□□□ -1.06
TGFBR3-209ENST00000532540 TBX22Q9Y458 520 aa8.4□□□□□ -1.06
TGFBR3-209ENST00000532540 ACEP12821 1306 aa8.4□□□□□ -1.06
TGFBR3-209ENST00000532540 DISP3Q9P2K9 1392 aa8.4□□□□□ -1.07
TGFBR3-209ENST00000532540 CADPS2Q86UW7 1296 aa8.39□□□□□ -1.07
TGFBR3-209ENST00000532540 PLCD3Q8N3E9 789 aa8.39□□□□□ -1.07
TGFBR3-209ENST00000532540 PANK2Q9BZ23 570 aa8.39□□□□□ -1.07
TGFBR3-209ENST00000532540 STAC3Q96MF2 364 aa8.39□□□□□ -1.07
TGFBR3-209ENST00000532540 C19orf44Q9H6X5 657 aa8.39□□□□□ -1.07
TGFBR3-209ENST00000532540 TOM1O60784 492 aa8.39□□□□□ -1.07
TGFBR3-209ENST00000532540 CGNQ9P2M7 1197 aaKnown RBP8.38□□□□□ -1.07
TGFBR3-209ENST00000532540 HMGN5P82970 282 aaKnown RBP8.38□□□□□ -1.07
TGFBR3-209ENST00000532540 NGLY1Q96IV0 654 aa8.38□□□□□ -1.07
TGFBR3-209ENST00000532540 EMILIN1Q9Y6C2 1016 aa8.38□□□□□ -1.07
TGFBR3-209ENST00000532540 MSH6P52701 1360 aa8.38□□□□□ -1.07
TGFBR3-209ENST00000532540 TMEM94Q12767 1356 aa8.38□□□□□ -1.07
TGFBR3-209ENST00000532540 ABCC3O15438 1527 aa8.38□□□□□ -1.07
TGFBR3-209ENST00000532540 DIP2CQ9Y2E4 1556 aa8.38□□□□□ -1.07
TGFBR3-209ENST00000532540 DYNC1I1O14576 645 aa8.37□□□□□ -1.07
TGFBR3-209ENST00000532540 MFAP1P55081 439 aaKnown RBP8.37□□□□□ -1.07
TGFBR3-209ENST00000532540 C8orf37Q96NL8 207 aa8.37□□□□□ -1.07
TGFBR3-209ENST00000532540 SLAIN2Q9P270 581 aa8.37□□□□□ -1.07
TGFBR3-209ENST00000532540 ERVK-7P63135 1459 aa8.37□□□□□ -1.07
TGFBR3-209ENST00000532540 CFAP74Q9C0B2 1584 aa8.37□□□□□ -1.07
TGFBR3-209ENST00000532540 PPRC1Q5VV67 1664 aaKnown RBP8.37□□□□□ -1.07
TGFBR3-209ENST00000532540 LETM1O95202 739 aaPredicted RBP8.37□□□□□ -1.07
TGFBR3-209ENST00000532540 CBX1P83916 185 aa8.37□□□□□ -1.07
TGFBR3-209ENST00000532540 DDX54Q8TDD1 881 aaKnown RBP8.37□□□□□ -1.07
TGFBR3-209ENST00000532540 ABCA6Q8N139 1617 aa8.37□□□□□ -1.07
TGFBR3-209ENST00000532540 MAST1Q9Y2H9 1570 aa8.36□□□□□ -1.07
TGFBR3-209ENST00000532540 PTPRMP28827 1452 aa8.36□□□□□ -1.07
TGFBR3-209ENST00000532540 NECTIN2Q92692 538 aa8.36□□□□□ -1.07
TGFBR3-209ENST00000532540 PRAG1Q86YV5 1406 aa8.36□□□□□ -1.07
TGFBR3-209ENST00000532540 RALBP1Q15311 655 aa8.36□□□□□ -1.07
TGFBR3-209ENST00000532540 TOM1L2Q6ZVM7 507 aa8.36□□□□□ -1.07
TGFBR3-209ENST00000532540 TESK2Q96S53 571 aa8.36□□□□□ -1.07
TGFBR3-209ENST00000532540 GTPBP4Q9BZE4 634 aaKnown RBP8.36□□□□□ -1.07
TGFBR3-209ENST00000532540 KIF20AO95235 890 aa8.35□□□□□ -1.07
TGFBR3-209ENST00000532540 KIDINS220Q9ULH0 1771 aa8.35□□□□□ -1.07
TGFBR3-209ENST00000532540 PPP4R3BQ5MIZ7 849 aa8.35□□□□□ -1.07
TGFBR3-209ENST00000532540 NLRP13Q86W25 1043 aa8.35□□□□□ -1.07
TGFBR3-209ENST00000532540 IPO4Q8TEX9 1081 aaKnown RBP8.35□□□□□ -1.07
TGFBR3-209ENST00000532540 CCDC39Q9UFE4 941 aa8.35□□□□□ -1.07
TGFBR3-209ENST00000532540 KDM5DQ9BY66 1539 aa8.35□□□□□ -1.07
TGFBR3-209ENST00000532540 YTHDC2Q9H6S0 1430 aaKnown RBP8.35□□□□□ -1.07
TGFBR3-209ENST00000532540 APAF1O14727 1248 aa8.35□□□□□ -1.07
TGFBR3-209ENST00000532540 OFD1O75665 1012 aa8.35□□□□□ -1.07
TGFBR3-209ENST00000532540 SASS6Q6UVJ0 657 aa8.35□□□□□ -1.07
TGFBR3-209ENST00000532540 ROBO2Q9HCK4 1378 aa8.34□□□□□ -1.07
TGFBR3-209ENST00000532540 IRX3P78415 501 aaPredicted RBP8.34□□□□□ -1.07
TGFBR3-209ENST00000532540 AEBP1Q8IUX7 1158 aa8.34□□□□□ -1.07
TGFBR3-209ENST00000532540 NGEFQ8N5V2 710 aa8.34□□□□□ -1.07
TGFBR3-209ENST00000532540 GLI2P10070 1586 aa8.34□□□□□ -1.07
TGFBR3-209ENST00000532540 NSD3Q9BZ95 1437 aa8.34□□□□□ -1.08
TGFBR3-209ENST00000532540 GOLGA6L6A8MZA4 724 aa8.34□□□□□ -1.08
TGFBR3-209ENST00000532540 RTF1Q92541 710 aaKnown RBP8.34□□□□□ -1.08
TGFBR3-209ENST00000532540 NPHP4O75161 1426 aaPredicted RBP8.33□□□□□ -1.08
TGFBR3-209ENST00000532540 VGLL3A8MV65 326 aa8.33□□□□□ -1.08
TGFBR3-209ENST00000532540 DIAPH1O60610 1272 aaKnown RBP8.33□□□□□ -1.08
TGFBR3-209ENST00000532540 SULT6B1Q6IMI4 303 aa8.33□□□□□ -1.08
TGFBR3-209ENST00000532540 FBXO41Q8TF61 875 aa8.33□□□□□ -1.08
TGFBR3-209ENST00000532540 SYAP1Q96A49 352 aaPredicted RBP8.33□□□□□ -1.08
TGFBR3-209ENST00000532540 CARD14Q9BXL6 1004 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 87.6 ms