RNA–Protein interactions for RNA: ENST00000532083.1

NLRP3-208, Transcript of NLR family pyrin domain containing 3, humanhuman

TSL 2

Gene NLRP3, Length 579 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NLRP3-208ENST00000532083 ATP7BP35670 1465 aa18.26■□□□□ 0.51
NLRP3-208ENST00000532083 KIAA1210Q9ULL0 1709 aa18.26■□□□□ 0.51
NLRP3-208ENST00000532083 EP400Q96L91 3159 aa18.25■□□□□ 0.51
NLRP3-208ENST00000532083 VPS72Q15906 364 aa18.24■□□□□ 0.51
NLRP3-208ENST00000532083 ITSN1Q15811 1721 aa18.23■□□□□ 0.51
NLRP3-208ENST00000532083 NUTM2GQ5VZR2 741 aa18.23■□□□□ 0.51
NLRP3-208ENST00000532083 BTG4Q9NY30 223 aa18.23■□□□□ 0.51
NLRP3-208ENST00000532083 BRWD3Q6RI45 1802 aa18.23■□□□□ 0.51
NLRP3-208ENST00000532083 NWD2Q9ULI1 1742 aa18.23■□□□□ 0.51
NLRP3-208ENST00000532083 SEPT12Q8IYM1 358 aa18.22■□□□□ 0.51
NLRP3-208ENST00000532083 ACEP12821 1306 aa18.22■□□□□ 0.51
NLRP3-208ENST00000532083 NBPF8Q3BBV2 869 aa18.2■□□□□ 0.5
NLRP3-208ENST00000532083 CABP2Q9NPB3 220 aa18.2■□□□□ 0.5
NLRP3-208ENST00000532083 CCDC61Q9Y6R9 512 aa18.2■□□□□ 0.5
NLRP3-208ENST00000532083 CRYBG1Q9Y4K1 1723 aa18.2■□□□□ 0.5
NLRP3-208ENST00000532083 SRPK2P78362 688 aaKnown RBP18.19■□□□□ 0.5
NLRP3-208ENST00000532083 CENPJQ9HC77 1338 aaPredicted RBP18.19■□□□□ 0.5
NLRP3-208ENST00000532083 TOPAZ1Q8N9V7 1692 aa18.18■□□□□ 0.5
NLRP3-208ENST00000532083 ROCK2O75116 1388 aaKnown RBP18.18■□□□□ 0.5
NLRP3-208ENST00000532083 NRAPQ86VF7 1730 aa18.18■□□□□ 0.5
NLRP3-208ENST00000532083 A0A0G2JS52 829 aa18.18■□□□□ 0.5
NLRP3-208ENST00000532083 MYT1Q01538 1121 aa18.18■□□□□ 0.5
NLRP3-208ENST00000532083 COL14A1Q05707 1796 aaKnown RBP18.17■□□□□ 0.5
NLRP3-208ENST00000532083 PLEKHG3A1L390 1219 aa18.17■□□□□ 0.5
NLRP3-208ENST00000532083 CHRNA2Q15822 529 aa18.17■□□□□ 0.5
NLRP3-208ENST00000532083 FAM98CQ17RN3 349 aaKnown RBP18.17■□□□□ 0.5
NLRP3-208ENST00000532083 PRDM11Q9NQV5 511 aa18.17■□□□□ 0.5
NLRP3-208ENST00000532083 POLR3AO14802 1390 aaPredicted RBP18.17■□□□□ 0.5
NLRP3-208ENST00000532083 ONECUT3O60422 494 aaPredicted RBP18.16■□□□□ 0.5
NLRP3-208ENST00000532083 ZC3H6P61129 1189 aaKnown RBP18.16■□□□□ 0.5
NLRP3-208ENST00000532083 TRPM1Q7Z4N2 1603 aa18.16■□□□□ 0.5
NLRP3-208ENST00000532083 QRICH2Q9H0J4 1663 aa18.15■□□□□ 0.5
NLRP3-208ENST00000532083 KIAA0232Q92628 1395 aa18.15■□□□□ 0.5
NLRP3-208ENST00000532083 ZEB1P37275 1124 aaPredicted RBP18.14■□□□□ 0.49
NLRP3-208ENST00000532083 KRT27Q7Z3Y8 459 aa18.14■□□□□ 0.49
NLRP3-208ENST00000532083 CCDC125Q86Z20 511 aa18.14■□□□□ 0.49
NLRP3-208ENST00000532083 ABTB2Q8N961 1025 aa18.14■□□□□ 0.49
NLRP3-208ENST00000532083 PPIP5K1Q6PFW1 1433 aa18.14■□□□□ 0.49
NLRP3-208ENST00000532083 PHRF1Q9P1Y6 1649 aaKnown RBP18.13■□□□□ 0.49
NLRP3-208ENST00000532083 STRN4Q9NRL3 753 aa18.13■□□□□ 0.49
NLRP3-208ENST00000532083 FAM182BQ5T319 152 aa18.12■□□□□ 0.49
NLRP3-208ENST00000532083 DEFB132Q7Z7B7 95 aa18.12■□□□□ 0.49
NLRP3-208ENST00000532083 CABP1Q9NZU7 370 aa18.12■□□□□ 0.49
NLRP3-208ENST00000532083 CARD11Q9BXL7 1154 aa18.11■□□□□ 0.49
NLRP3-208ENST00000532083 SPATA31A5Q5VU36 1347 aa18.11■□□□□ 0.49
NLRP3-208ENST00000532083 SPATA31A7Q8IWB4 1347 aa18.11■□□□□ 0.49
NLRP3-208ENST00000532083 BLMP54132 1417 aaPredicted RBP18.1■□□□□ 0.49
NLRP3-208ENST00000532083 ZRANB1Q9UGI0 708 aa18.09■□□□□ 0.49
NLRP3-208ENST00000532083 USP35Q9P2H5 1018 aa18.08■□□□□ 0.48
NLRP3-208ENST00000532083 SF3B2Q13435 895 aaKnown RBP18.07■□□□□ 0.48
NLRP3-208ENST00000532083 NRKQ7Z2Y5 1582 aa18.07■□□□□ 0.48
NLRP3-208ENST00000532083 SPATA31A1Q5TZJ5 1347 aa18.06■□□□□ 0.48
NLRP3-208ENST00000532083 EVC2Q86UK5 1308 aa18.06■□□□□ 0.48
NLRP3-208ENST00000532083 ZBTB7CA1YPR0 619 aa18.06■□□□□ 0.48
NLRP3-208ENST00000532083 EVA1CP58658 441 aa18.06■□□□□ 0.48
NLRP3-208ENST00000532083 NLRP13Q86W25 1043 aa18.06■□□□□ 0.48
NLRP3-208ENST00000532083 USP19O94966 1318 aa18.05■□□□□ 0.48
NLRP3-208ENST00000532083 GCP02774 474 aa18.05■□□□□ 0.48
NLRP3-208ENST00000532083 CAMTA1Q9Y6Y1 1673 aa18.04■□□□□ 0.48
NLRP3-208ENST00000532083 USP6P35125 1406 aa18.04■□□□□ 0.48
NLRP3-208ENST00000532083 SLC24A1O60721 1099 aa18.03■□□□□ 0.48
NLRP3-208ENST00000532083 NLRP6P59044 892 aa18.03■□□□□ 0.48
NLRP3-208ENST00000532083 LARP1Q6PKG0 1096 aaKnown RBP18.03■□□□□ 0.48
NLRP3-208ENST00000532083 SRCAPQ6ZRS2 3230 aa18.03■□□□□ 0.48
NLRP3-208ENST00000532083 THSD7AQ9UPZ6 1657 aa18.03■□□□□ 0.48
NLRP3-208ENST00000532083 SBNO2Q9Y2G9 1366 aa18.02■□□□□ 0.47
NLRP3-208ENST00000532083 SSH2Q76I76 1423 aa18.01■□□□□ 0.47
NLRP3-208ENST00000532083 CPDO75976 1380 aa18.01■□□□□ 0.47
NLRP3-208ENST00000532083 USP47Q96K76 1375 aa18.01■□□□□ 0.47
NLRP3-208ENST00000532083 LMO7Q8WWI1 1683 aa17.99■□□□□ 0.47
NLRP3-208ENST00000532083 SOX12O15370 315 aa17.98■□□□□ 0.47
NLRP3-208ENST00000532083 EN1Q05925 392 aaPredicted RBP17.98■□□□□ 0.47
NLRP3-208ENST00000532083 PIK3C2AO00443 1686 aa17.98■□□□□ 0.47
NLRP3-208ENST00000532083 BRD4O60885 1362 aaPredicted RBP17.97■□□□□ 0.47
NLRP3-208ENST00000532083 BAG6P46379 1132 aa17.97■□□□□ 0.47
NLRP3-208ENST00000532083 EIF4G2P78344 907 aaKnown RBP eCLIP17.97■□□□□ 0.47
NLRP3-208ENST00000532083 TTC21BQ7Z4L5 1316 aa17.97■□□□□ 0.47
NLRP3-208ENST00000532083 BARGINQ6ZT62 677 aa17.96■□□□□ 0.47
NLRP3-208ENST00000532083 TCP11L2Q8N4U5 519 aa17.96■□□□□ 0.47
NLRP3-208ENST00000532083 AKAP12Q02952 1782 aa17.96■□□□□ 0.47
NLRP3-208ENST00000532083 SLIT3O75094 1523 aa17.95■□□□□ 0.46
NLRP3-208ENST00000532083 TRIM37O94972 964 aa17.95■□□□□ 0.46
NLRP3-208ENST00000532083 ZNF692Q9BU19 519 aaPredicted RBP17.95■□□□□ 0.46
NLRP3-208ENST00000532083 RGPD1P0DJD0 1748 aa17.95■□□□□ 0.46
NLRP3-208ENST00000532083 COL5A2P05997 1499 aaPredicted RBP17.95■□□□□ 0.46
NLRP3-208ENST00000532083 PSDA5PKW4 1024 aaPredicted RBP17.94■□□□□ 0.46
NLRP3-208ENST00000532083 PDE3BQ13370 1112 aa17.94■□□□□ 0.46
NLRP3-208ENST00000532083 KTN1Q86UP2 1357 aaKnown RBP17.93■□□□□ 0.46
NLRP3-208ENST00000532083 ST20-MTHFSA0A0A6YYL1 179 aa17.93■□□□□ 0.46
NLRP3-208ENST00000532083 FAM196AQ6ZSG2 479 aa17.93■□□□□ 0.46
NLRP3-208ENST00000532083 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.93■□□□□ 0.46
NLRP3-208ENST00000532083 AXIN2Q9Y2T1 843 aa17.93■□□□□ 0.46
NLRP3-208ENST00000532083 TNS1Q9HBL0 1735 aaKnown RBP17.92■□□□□ 0.46
NLRP3-208ENST00000532083 CPSF1Q10570 1443 aaKnown RBP17.92■□□□□ 0.46
NLRP3-208ENST00000532083 EZH2Q15910 746 aaKnown RBP17.92■□□□□ 0.46
NLRP3-208ENST00000532083 TMC1Q8TDI8 760 aa17.92■□□□□ 0.46
NLRP3-208ENST00000532083 AATKQ6ZMQ8 1374 aa17.91■□□□□ 0.46
NLRP3-208ENST00000532083 COL18A1P39060 1754 aa17.91■□□□□ 0.46
NLRP3-208ENST00000532083 CRB1P82279 1406 aa17.9■□□□□ 0.46
NLRP3-208ENST00000532083 RGPD5Q99666 1765 aa17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms