RNA–Protein interactions for RNA: ENST00000531967.5

ECHDC1-222, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene ECHDC1, Length 2,585 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-222ENST00000531967 CSPP1Q1MSJ5 1256 aa6.97□□□□□ -1.29
ECHDC1-222ENST00000531967 C4orf46Q504U0 113 aa6.97□□□□□ -1.29
ECHDC1-222ENST00000531967 PCDH12Q9NPG4 1184 aa6.97□□□□□ -1.29
ECHDC1-222ENST00000531967 G3BP2Q9UN86 482 aaKnown RBP6.97□□□□□ -1.29
ECHDC1-222ENST00000531967 HOXA2O43364 376 aa6.97□□□□□ -1.29
ECHDC1-222ENST00000531967 LZTS3O60299 673 aaPredicted RBP6.97□□□□□ -1.29
ECHDC1-222ENST00000531967 PRR29P0C7W0 189 aa6.97□□□□□ -1.29
ECHDC1-222ENST00000531967 HSD3B2P26439 372 aa6.97□□□□□ -1.29
ECHDC1-222ENST00000531967 MAP3K9P80192 1104 aa6.97□□□□□ -1.29
ECHDC1-222ENST00000531967 RBL2Q08999 1139 aa6.97□□□□□ -1.29
ECHDC1-222ENST00000531967 CLEC4GQ6UXB4 293 aa6.97□□□□□ -1.29
ECHDC1-222ENST00000531967 ASB16Q96NS5 453 aa6.97□□□□□ -1.29
ECHDC1-222ENST00000531967 RPUSD2Q8IZ73 545 aaKnown RBP6.96□□□□□ -1.29
ECHDC1-222ENST00000531967 RPS6KL1Q9Y6S9 549 aa6.96□□□□□ -1.29
ECHDC1-222ENST00000531967 SPTLC1O15269 473 aa6.96□□□□□ -1.3
ECHDC1-222ENST00000531967 SCNN1AP37088 669 aa6.96□□□□□ -1.3
ECHDC1-222ENST00000531967 TBX4P57082 545 aa6.96□□□□□ -1.3
ECHDC1-222ENST00000531967 OS9Q13438 667 aaPredicted RBP6.96□□□□□ -1.3
ECHDC1-222ENST00000531967 AAMPQ13685 434 aa6.96□□□□□ -1.3
ECHDC1-222ENST00000531967 KRBA2Q6ZNG9 492 aa6.96□□□□□ -1.3
ECHDC1-222ENST00000531967 TGIF2Q9GZN2 237 aa6.96□□□□□ -1.3
ECHDC1-222ENST00000531967 MAPK1P28482 360 aa6.95□□□□□ -1.3
ECHDC1-222ENST00000531967 RHBDL3P58872 404 aa6.95□□□□□ -1.3
ECHDC1-222ENST00000531967 BMS1Q14692 1282 aaKnown RBP6.95□□□□□ -1.3
ECHDC1-222ENST00000531967 COL19A1Q14993 1142 aa6.95□□□□□ -1.3
ECHDC1-222ENST00000531967 EAPPQ56P03 285 aaPredicted RBP6.95□□□□□ -1.3
ECHDC1-222ENST00000531967 RTL5Q5HYW3 569 aaPredicted RBP6.95□□□□□ -1.3
ECHDC1-222ENST00000531967 TMC2Q8TDI7 906 aa6.95□□□□□ -1.3
ECHDC1-222ENST00000531967 CLP1Q92989 425 aaKnown RBP6.95□□□□□ -1.3
ECHDC1-222ENST00000531967 MTA3Q9BTC8 594 aa6.95□□□□□ -1.3
ECHDC1-222ENST00000531967 IFT57Q9NWB7 429 aa6.95□□□□□ -1.3
ECHDC1-222ENST00000531967 PRR12Q9ULL5 1215 aa6.95□□□□□ -1.3
ECHDC1-222ENST00000531967 LILRB3O75022 631 aa6.95□□□□□ -1.3
ECHDC1-222ENST00000531967 FILIP1Q7Z7B0 1213 aa6.95□□□□□ -1.3
ECHDC1-222ENST00000531967 SPIRE2Q8WWL2 714 aa6.95□□□□□ -1.3
ECHDC1-222ENST00000531967 GMLQ99445 158 aa6.95□□□□□ -1.3
ECHDC1-222ENST00000531967 CCSER2Q9H7U1 834 aa6.95□□□□□ -1.3
ECHDC1-222ENST00000531967 S100BP04271 92 aaPredicted RBP6.94□□□□□ -1.3
ECHDC1-222ENST00000531967 SEMA3FQ13275 785 aa6.94□□□□□ -1.3
ECHDC1-222ENST00000531967 TRIM34Q9BYJ4 488 aa6.94□□□□□ -1.3
ECHDC1-222ENST00000531967 OSBPL2Q9H1P3 480 aa6.94□□□□□ -1.3
ECHDC1-222ENST00000531967 MRPL42Q9Y6G3 142 aaKnown RBP6.94□□□□□ -1.3
ECHDC1-222ENST00000531967 ATP2B4P23634 1241 aa6.94□□□□□ -1.3
ECHDC1-222ENST00000531967 DNAJA1P31689 397 aaKnown RBP6.94□□□□□ -1.3
ECHDC1-222ENST00000531967 FAM69CQ0P6D2 419 aa6.94□□□□□ -1.3
ECHDC1-222ENST00000531967 BIRC2Q13490 618 aa6.94□□□□□ -1.3
ECHDC1-222ENST00000531967 RSBN1LQ6PCB5 846 aaPredicted RBP6.94□□□□□ -1.3
ECHDC1-222ENST00000531967 METTL3Q86U44 580 aaKnown RBP6.94□□□□□ -1.3
ECHDC1-222ENST00000531967 IFNL1Q8IU54 200 aa6.94□□□□□ -1.3
ECHDC1-222ENST00000531967 SPDYE1Q8NFV5 336 aaPredicted RBP6.94□□□□□ -1.3
ECHDC1-222ENST00000531967 HMX1Q9NP08 348 aaPredicted RBP6.94□□□□□ -1.3
ECHDC1-222ENST00000531967 NPDC1Q9NQX5 325 aaPredicted RBP6.94□□□□□ -1.3
ECHDC1-222ENST00000531967 FOXK1P85037 733 aa6.93□□□□□ -1.3
ECHDC1-222ENST00000531967 PPP1R18Q6NYC8 613 aa6.93□□□□□ -1.3
ECHDC1-222ENST00000531967 C11orf96Q7Z7L8 435 aa6.93□□□□□ -1.3
ECHDC1-222ENST00000531967 STAG1Q8WVM7 1258 aa6.93□□□□□ -1.3
ECHDC1-222ENST00000531967 GNL3LQ9NVN8 582 aaKnown RBP6.93□□□□□ -1.3
ECHDC1-222ENST00000531967 DDX56Q9NY93 547 aaKnown RBP6.93□□□□□ -1.3
ECHDC1-222ENST00000531967 RPS6KC1Q96S38 1066 aa6.93□□□□□ -1.3
ECHDC1-222ENST00000531967 SOGA3Q5TF21 947 aa6.92□□□□□ -1.3
ECHDC1-222ENST00000531967 FMNL3Q8IVF7 1028 aa6.92□□□□□ -1.3
ECHDC1-222ENST00000531967 TMEM87AQ8NBN3 555 aa6.92□□□□□ -1.3
ECHDC1-222ENST00000531967 PNISRQ8TF01 805 aaKnown RBP6.92□□□□□ -1.3
ECHDC1-222ENST00000531967 ACBD3Q9H3P7 528 aa6.92□□□□□ -1.3
ECHDC1-222ENST00000531967 CDHR5Q9HBB8 845 aa6.92□□□□□ -1.3
ECHDC1-222ENST00000531967 PPP1R3GB7ZBB8 358 aa6.92□□□□□ -1.3
ECHDC1-222ENST00000531967 MAMSTRQ6ZN01 415 aa6.92□□□□□ -1.3
ECHDC1-222ENST00000531967 ZSCAN29Q8IWY8 852 aaPredicted RBP6.92□□□□□ -1.3
ECHDC1-222ENST00000531967 H3BRB1 525 aa6.91□□□□□ -1.3
ECHDC1-222ENST00000531967 WDHD1O75717 1129 aaPredicted RBP6.91□□□□□ -1.3
ECHDC1-222ENST00000531967 GNL2Q13823 731 aaKnown RBP6.91□□□□□ -1.3
ECHDC1-222ENST00000531967 FAM161AQ3B820 660 aa6.91□□□□□ -1.3
ECHDC1-222ENST00000531967 TUT1Q9H6E5 874 aaKnown RBP6.91□□□□□ -1.3
ECHDC1-222ENST00000531967 TNNI2P48788 182 aa6.91□□□□□ -1.3
ECHDC1-222ENST00000531967 EGFL7Q9UHF1 273 aa6.91□□□□□ -1.3
ECHDC1-222ENST00000531967 FAM196BA6NMK8 535 aa6.9□□□□□ -1.3
ECHDC1-222ENST00000531967 KIF4AO95239 1232 aa6.9□□□□□ -1.3
ECHDC1-222ENST00000531967 FANCCQ00597 558 aa6.9□□□□□ -1.3
ECHDC1-222ENST00000531967 DCTN4Q9UJW0 460 aa6.9□□□□□ -1.3
ECHDC1-222ENST00000531967 COMMD10Q9Y6G5 202 aa6.9□□□□□ -1.3
ECHDC1-222ENST00000531967 ABL1P00519 1130 aa6.9□□□□□ -1.31
ECHDC1-222ENST00000531967 NUTM2BA6NNL0 878 aaPredicted RBP6.89□□□□□ -1.31
ECHDC1-222ENST00000531967 NUTM2EB1AL46 878 aaPredicted RBP6.89□□□□□ -1.31
ECHDC1-222ENST00000531967 USP17L15C9J2P7 530 aa6.89□□□□□ -1.31
ECHDC1-222ENST00000531967 USP17L10C9JJH3 530 aa6.89□□□□□ -1.31
ECHDC1-222ENST00000531967 USP17L13C9JLJ4 530 aa6.89□□□□□ -1.31
ECHDC1-222ENST00000531967 USP17L12C9JPN9 530 aa6.89□□□□□ -1.31
ECHDC1-222ENST00000531967 USP17L11C9JVI0 530 aa6.89□□□□□ -1.31
ECHDC1-222ENST00000531967 USP17L21D6R901 530 aa6.89□□□□□ -1.31
ECHDC1-222ENST00000531967 USP17L18D6R9N7 530 aa6.89□□□□□ -1.31
ECHDC1-222ENST00000531967 USP17L22D6RA61 530 aa6.89□□□□□ -1.31
ECHDC1-222ENST00000531967 USP17L17D6RBQ6 530 aa6.89□□□□□ -1.31
ECHDC1-222ENST00000531967 USP17L19D6RCP7 530 aa6.89□□□□□ -1.31
ECHDC1-222ENST00000531967 USP17L20D6RJB6 530 aa6.89□□□□□ -1.31
ECHDC1-222ENST00000531967 PRC1O43663 620 aa6.89□□□□□ -1.31
ECHDC1-222ENST00000531967 DNAJC6O75061 913 aa6.89□□□□□ -1.31
ECHDC1-222ENST00000531967 USP17L24Q0WX57 530 aa6.89□□□□□ -1.31
ECHDC1-222ENST00000531967 ZNF211Q13398 564 aaPredicted RBP6.89□□□□□ -1.31
ECHDC1-222ENST00000531967 NUTM2DQ5VT03 806 aaPredicted RBP6.89□□□□□ -1.31
ECHDC1-222ENST00000531967 NUTM2AQ8IVF1 878 aaPredicted RBP6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms