RNA–Protein interactions for RNA: ENST00000531242.1

NUCB2-213, Transcript of nucleobindin 2, humanhuman

TSL 2

Gene NUCB2, Length 639 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUCB2-213ENST00000531242 GPSM3Q9Y4H4 160 aa13.08□□□□□ -0.32
NUCB2-213ENST00000531242 SRPK2P78362 688 aaKnown RBP13.07□□□□□ -0.32
NUCB2-213ENST00000531242 CSB-PGBD3P0DP91 1061 aa13.06□□□□□ -0.32
NUCB2-213ENST00000531242 MCCD1P59942 119 aaPredicted RBP13.06□□□□□ -0.32
NUCB2-213ENST00000531242 RFX1P22670 979 aa13.05□□□□□ -0.32
NUCB2-213ENST00000531242 TFIP11Q9UBB9 837 aaKnown RBP13.05□□□□□ -0.32
NUCB2-213ENST00000531242 CCNYL3P0C7X3 344 aa13.04□□□□□ -0.32
NUCB2-213ENST00000531242 LMOD1P29536 600 aaPredicted RBP13.04□□□□□ -0.32
NUCB2-213ENST00000531242 NFATC2IPQ8NCF5 419 aa13.04□□□□□ -0.32
NUCB2-213ENST00000531242 UCN2Q96RP3 112 aa13.04□□□□□ -0.32
NUCB2-213ENST00000531242 SPSB2Q99619 263 aa13.04□□□□□ -0.32
NUCB2-213ENST00000531242 EVA1BQ9NVM1 165 aa13.04□□□□□ -0.32
NUCB2-213ENST00000531242 CCDC9Q9Y3X0 531 aaKnown RBP13.04□□□□□ -0.32
NUCB2-213ENST00000531242 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.03□□□□□ -0.32
NUCB2-213ENST00000531242 DXOO77932 396 aaKnown RBP13.03□□□□□ -0.32
NUCB2-213ENST00000531242 FBXO45P0C2W1 286 aa13.03□□□□□ -0.32
NUCB2-213ENST00000531242 MMP16P51512 607 aa13.03□□□□□ -0.32
NUCB2-213ENST00000531242 WBP1LQ9NX94 342 aa13.03□□□□□ -0.32
NUCB2-213ENST00000531242 ATP9BO43861 1147 aa13.02□□□□□ -0.33
NUCB2-213ENST00000531242 CTHP32929 405 aa13.02□□□□□ -0.33
NUCB2-213ENST00000531242 MAFBQ9Y5Q3 323 aaPredicted RBP13.02□□□□□ -0.33
NUCB2-213ENST00000531242 PTK2Q05397 1052 aa13.01□□□□□ -0.33
NUCB2-213ENST00000531242 LCE2DQ5TA82 110 aaPredicted RBP13.01□□□□□ -0.33
NUCB2-213ENST00000531242 NBPF14Q5TI25 921 aa13.01□□□□□ -0.33
NUCB2-213ENST00000531242 PDXDC2PQ6P474 469 aa13.01□□□□□ -0.33
NUCB2-213ENST00000531242 ATG7O95352 703 aa13□□□□□ -0.33
NUCB2-213ENST00000531242 KCNH2Q12809 1159 aa13□□□□□ -0.33
NUCB2-213ENST00000531242 THSD4Q6ZMP0 1018 aa13□□□□□ -0.33
NUCB2-213ENST00000531242 AEBP1Q8IUX7 1158 aa13□□□□□ -0.33
NUCB2-213ENST00000531242 NUDT12Q9BQG2 462 aa13□□□□□ -0.33
NUCB2-213ENST00000531242 MAP10Q9P2G4 905 aa13□□□□□ -0.33
NUCB2-213ENST00000531242 FAM160A2Q8N612 972 aaPredicted RBP12.98□□□□□ -0.33
NUCB2-213ENST00000531242 BRD1O95696 1058 aa12.97□□□□□ -0.33
NUCB2-213ENST00000531242 TBC1D9Q6ZT07 1266 aa12.97□□□□□ -0.33
NUCB2-213ENST00000531242 ADH1BP00325 375 aa12.96□□□□□ -0.33
NUCB2-213ENST00000531242 VRTNQ9H8Y1 702 aa12.95□□□□□ -0.34
NUCB2-213ENST00000531242 LZTS3O60299 673 aaPredicted RBP12.94□□□□□ -0.34
NUCB2-213ENST00000531242 ZPR1O75312 459 aa12.94□□□□□ -0.34
NUCB2-213ENST00000531242 COPS2P61201 443 aa12.94□□□□□ -0.34
NUCB2-213ENST00000531242 KCNA1Q09470 495 aa12.94□□□□□ -0.34
NUCB2-213ENST00000531242 PLEKHM2Q8IWE5 1019 aa12.94□□□□□ -0.34
NUCB2-213ENST00000531242 ELOAQ14241 798 aaKnown RBP12.92□□□□□ -0.34
NUCB2-213ENST00000531242 MYT1LQ9UL68 1186 aa12.91□□□□□ -0.34
NUCB2-213ENST00000531242 SLFNL1Q499Z3 407 aa12.89□□□□□ -0.35
NUCB2-213ENST00000531242 B4GALNT3Q6L9W6 998 aa12.89□□□□□ -0.35
NUCB2-213ENST00000531242 KCTD12Q96CX2 325 aaKnown RBP12.89□□□□□ -0.35
NUCB2-213ENST00000531242 IL21Q9HBE4 155 aa12.89□□□□□ -0.35
NUCB2-213ENST00000531242 CEP126Q9P2H0 1117 aa12.89□□□□□ -0.35
NUCB2-213ENST00000531242 SKIP12755 728 aa12.88□□□□□ -0.35
NUCB2-213ENST00000531242 KANK4Q5T7N3 995 aaPredicted RBP12.88□□□□□ -0.35
NUCB2-213ENST00000531242 ARHGAP9Q9BRR9 750 aa12.88□□□□□ -0.35
NUCB2-213ENST00000531242 KRTAP3-3Q9BYR6 98 aa12.88□□□□□ -0.35
NUCB2-213ENST00000531242 KRTAP3-2Q9BYR7 98 aa12.88□□□□□ -0.35
NUCB2-213ENST00000531242 MTRQ99707 1265 aa12.87□□□□□ -0.35
NUCB2-213ENST00000531242 PRDM9Q9NQV7 894 aa12.87□□□□□ -0.35
NUCB2-213ENST00000531242 USP17L3A6NCW0 530 aa12.86□□□□□ -0.35
NUCB2-213ENST00000531242 USP17L4A6NCW7 530 aa12.86□□□□□ -0.35
NUCB2-213ENST00000531242 USP17L5A8MUK1 530 aa12.86□□□□□ -0.35
NUCB2-213ENST00000531242 MAP7D1Q3KQU3 841 aa12.86□□□□□ -0.35
NUCB2-213ENST00000531242 USP17L2Q6R6M4 530 aa12.86□□□□□ -0.35
NUCB2-213ENST00000531242 USP17L1Q7RTZ2 530 aa12.86□□□□□ -0.35
NUCB2-213ENST00000531242 SLC6A16Q9GZN6 736 aa12.86□□□□□ -0.35
NUCB2-213ENST00000531242 UNC93B1Q9H1C4 597 aa12.86□□□□□ -0.35
NUCB2-213ENST00000531242 ZBTB33Q86T24 672 aa12.85□□□□□ -0.35
NUCB2-213ENST00000531242 PCDHB9Q9Y5E1 797 aa12.85□□□□□ -0.35
NUCB2-213ENST00000531242 ADAM32Q8TC27 787 aa12.84□□□□□ -0.35
NUCB2-213ENST00000531242 TMEM88BA6NKF7 163 aa12.83□□□□□ -0.36
NUCB2-213ENST00000531242 FAM196BA6NMK8 535 aa12.83□□□□□ -0.36
NUCB2-213ENST00000531242 ATP5J2-PTCD1G3V325 749 aa12.83□□□□□ -0.36
NUCB2-213ENST00000531242 PIK3CDO00329 1044 aa12.83□□□□□ -0.36
NUCB2-213ENST00000531242 CDCA8Q53HL2 280 aa12.83□□□□□ -0.36
NUCB2-213ENST00000531242 SH3BP5LQ7L8J4 393 aa12.83□□□□□ -0.36
NUCB2-213ENST00000531242 RNF135Q8IUD6 432 aa12.83□□□□□ -0.36
NUCB2-213ENST00000531242 OCSTAMPQ9BR26 566 aa12.83□□□□□ -0.36
NUCB2-213ENST00000531242 TLL1O43897 1013 aa12.82□□□□□ -0.36
NUCB2-213ENST00000531242 TJAP1Q5JTD0 557 aa12.82□□□□□ -0.36
NUCB2-213ENST00000531242 TMCO4Q5TGY1 634 aa12.82□□□□□ -0.36
NUCB2-213ENST00000531242 PHTF2Q8N3S3 785 aa12.82□□□□□ -0.36
NUCB2-213ENST00000531242 CCDC24Q8N4L8 307 aa12.82□□□□□ -0.36
NUCB2-213ENST00000531242 CHIC2Q9UKJ5 165 aa12.82□□□□□ -0.36
NUCB2-213ENST00000531242 RANGAP1P46060 587 aaPredicted RBP12.81□□□□□ -0.36
NUCB2-213ENST00000531242 BPHLQ86WA6 291 aaPredicted RBP12.81□□□□□ -0.36
NUCB2-213ENST00000531242 CCDC125Q86Z20 511 aa12.81□□□□□ -0.36
NUCB2-213ENST00000531242 GZF1Q9H116 711 aaPredicted RBP12.81□□□□□ -0.36
NUCB2-213ENST00000531242 LARP1Q6PKG0 1096 aaKnown RBP12.8□□□□□ -0.36
NUCB2-213ENST00000531242 FAM174AQ8TBP5 190 aa12.8□□□□□ -0.36
NUCB2-213ENST00000531242 SH3RF1Q7Z6J0 888 aa12.79□□□□□ -0.36
NUCB2-213ENST00000531242 DZIP3Q86Y13 1208 aaKnown RBP12.79□□□□□ -0.36
NUCB2-213ENST00000531242 PLPP7Q8NBV4 271 aa12.79□□□□□ -0.36
NUCB2-213ENST00000531242 MKRN1Q9UHC7 482 aaKnown RBP12.79□□□□□ -0.36
NUCB2-213ENST00000531242 RNF20Q5VTR2 975 aa12.78□□□□□ -0.36
NUCB2-213ENST00000531242 NOVA2Q9UNW9 492 aaKnown RBP12.78□□□□□ -0.36
NUCB2-213ENST00000531242 EML3Q32P44 896 aa12.77□□□□□ -0.37
NUCB2-213ENST00000531242 PTCRAQ6ISU1 281 aaPredicted RBP12.77□□□□□ -0.37
NUCB2-213ENST00000531242 TRIM50Q86XT4 487 aa12.77□□□□□ -0.37
NUCB2-213ENST00000531242 PTPN5P54829 565 aa12.76□□□□□ -0.37
NUCB2-213ENST00000531242 NCOA4Q13772 614 aa12.76□□□□□ -0.37
NUCB2-213ENST00000531242 CDV3Q9UKY7 258 aaKnown RBP12.76□□□□□ -0.37
NUCB2-213ENST00000531242 POTEMA6NI47 508 aa12.75□□□□□ -0.37
NUCB2-213ENST00000531242 USP17L15C9J2P7 530 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 89.9 ms