RNA–Protein interactions for RNA: ENST00000531056.5

UBXN1-211, Transcript of UBX domain protein 1, humanhuman

TSL 4

Gene UBXN1, Length 560 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-211ENST00000531056 RXRBP28702 533 aa27.01■■□□□ 1.91
UBXN1-211ENST00000531056 QTRT2Q9H974 415 aaKnown RBP27.01■■□□□ 1.91
UBXN1-211ENST00000531056 USP21Q9UK80 565 aa27.01■■□□□ 1.91
UBXN1-211ENST00000531056 PLCH1Q4KWH8 1693 aa27.01■■□□□ 1.91
UBXN1-211ENST00000531056 ATRNO75882 1429 aa27■■□□□ 1.91
UBXN1-211ENST00000531056 PHRF1Q9P1Y6 1649 aaKnown RBP26.98■■□□□ 1.91
UBXN1-211ENST00000531056 PAK3O75914 559 aaPredicted RBP26.98■■□□□ 1.91
UBXN1-211ENST00000531056 NWD2Q9ULI1 1742 aa26.98■■□□□ 1.91
UBXN1-211ENST00000531056 HAP1P54257 671 aaPredicted RBP26.97■■□□□ 1.91
UBXN1-211ENST00000531056 PLEKHG5O94827 1062 aa26.96■■□□□ 1.91
UBXN1-211ENST00000531056 AKAP12Q02952 1782 aa26.95■■□□□ 1.9
UBXN1-211ENST00000531056 RBM6P78332 1123 aaKnown RBP26.95■■□□□ 1.9
UBXN1-211ENST00000531056 TRPC5Q9UL62 973 aaPredicted RBP26.95■■□□□ 1.9
UBXN1-211ENST00000531056 RGS12O14924 1447 aa26.94■■□□□ 1.9
UBXN1-211ENST00000531056 CABP1Q9NZU7 370 aa26.94■■□□□ 1.9
UBXN1-211ENST00000531056 TIMELESSQ9UNS1 1208 aa26.94■■□□□ 1.9
UBXN1-211ENST00000531056 USP6P35125 1406 aa26.93■■□□□ 1.9
UBXN1-211ENST00000531056 ATAD2Q6PL18 1390 aa26.93■■□□□ 1.9
UBXN1-211ENST00000531056 COL14A1Q05707 1796 aaKnown RBP26.92■■□□□ 1.9
UBXN1-211ENST00000531056 NRAPQ86VF7 1730 aa26.92■■□□□ 1.9
UBXN1-211ENST00000531056 BRD4O60885 1362 aaPredicted RBP26.92■■□□□ 1.9
UBXN1-211ENST00000531056 SSH2Q76I76 1423 aa26.9■■□□□ 1.9
UBXN1-211ENST00000531056 NRKQ7Z2Y5 1582 aa26.89■■□□□ 1.9
UBXN1-211ENST00000531056 UNC5CLQ8IV45 518 aa26.89■■□□□ 1.9
UBXN1-211ENST00000531056 GLI3P10071 1580 aa26.88■■□□□ 1.89
UBXN1-211ENST00000531056 PIK3C2AO00443 1686 aa26.87■■□□□ 1.89
UBXN1-211ENST00000531056 FAM83GA6ND36 823 aa26.87■■□□□ 1.89
UBXN1-211ENST00000531056 MON2Q7Z3U7 1717 aa26.87■■□□□ 1.89
UBXN1-211ENST00000531056 CPSF1Q10570 1443 aaKnown RBP26.86■■□□□ 1.89
UBXN1-211ENST00000531056 NUTM2GQ5VZR2 741 aa26.86■■□□□ 1.89
UBXN1-211ENST00000531056 TESK2Q96S53 571 aa26.86■■□□□ 1.89
UBXN1-211ENST00000531056 CCER1Q8TC90 406 aaPredicted RBP26.85■■□□□ 1.89
UBXN1-211ENST00000531056 USP19O94966 1318 aa26.85■■□□□ 1.89
UBXN1-211ENST00000531056 ST20-MTHFSA0A0A6YYL1 179 aa26.84■■□□□ 1.89
UBXN1-211ENST00000531056 ABTB2Q8N961 1025 aa26.84■■□□□ 1.89
UBXN1-211ENST00000531056 USP47Q96K76 1375 aa26.84■■□□□ 1.89
UBXN1-211ENST00000531056 CD163L1Q9NR16 1453 aa26.82■■□□□ 1.88
UBXN1-211ENST00000531056 GJD4Q96KN9 370 aaPredicted RBP26.82■■□□□ 1.88
UBXN1-211ENST00000531056 SLIT3O75094 1523 aa26.8■■□□□ 1.88
UBXN1-211ENST00000531056 VPS72Q15906 364 aa26.8■■□□□ 1.88
UBXN1-211ENST00000531056 PUS7Q96PZ0 661 aaKnown RBP26.8■■□□□ 1.88
UBXN1-211ENST00000531056 ZNF692Q9BU19 519 aaPredicted RBP26.8■■□□□ 1.88
UBXN1-211ENST00000531056 KIAA0232Q92628 1395 aa26.8■■□□□ 1.88
UBXN1-211ENST00000531056 NLRP13Q86W25 1043 aa26.78■■□□□ 1.88
UBXN1-211ENST00000531056 PRDM11Q9NQV5 511 aa26.78■■□□□ 1.88
UBXN1-211ENST00000531056 BTG4Q9NY30 223 aa26.78■■□□□ 1.88
UBXN1-211ENST00000531056 LMO7Q8WWI1 1683 aa26.77■■□□□ 1.88
UBXN1-211ENST00000531056 KTN1Q86UP2 1357 aaKnown RBP26.77■■□□□ 1.88
UBXN1-211ENST00000531056 TTC21BQ7Z4L5 1316 aa26.77■■□□□ 1.88
UBXN1-211ENST00000531056 CPDO75976 1380 aa26.76■■□□□ 1.87
UBXN1-211ENST00000531056 USP54Q70EL1 1684 aa26.75■■□□□ 1.87
UBXN1-211ENST00000531056 TTC21AQ8NDW8 1320 aa26.74■■□□□ 1.87
UBXN1-211ENST00000531056 SLC24A1O60721 1099 aa26.74■■□□□ 1.87
UBXN1-211ENST00000531056 ZC3H6P61129 1189 aaKnown RBP26.74■■□□□ 1.87
UBXN1-211ENST00000531056 GCP02774 474 aa26.72■■□□□ 1.87
UBXN1-211ENST00000531056 NLRP6P59044 892 aa26.72■■□□□ 1.87
UBXN1-211ENST00000531056 CHRNA2Q15822 529 aa26.72■■□□□ 1.87
UBXN1-211ENST00000531056 SLC12A5Q9H2X9 1139 aa26.72■■□□□ 1.87
UBXN1-211ENST00000531056 BRWD3Q6RI45 1802 aa26.72■■□□□ 1.87
UBXN1-211ENST00000531056 NINLQ9Y2I6 1382 aa26.71■■□□□ 1.87
UBXN1-211ENST00000531056 TMC1Q8TDI8 760 aa26.71■■□□□ 1.87
UBXN1-211ENST00000531056 UPF1Q92900 1129 aaKnown RBP eCLIP26.71■■□□□ 1.87
UBXN1-211ENST00000531056 A0A1W2PP64 1363 aa26.71■■□□□ 1.87
UBXN1-211ENST00000531056 CAMTA1Q9Y6Y1 1673 aa26.7■■□□□ 1.86
UBXN1-211ENST00000531056 EDC4Q6P2E9 1401 aaKnown RBP26.68■■□□□ 1.86
UBXN1-211ENST00000531056 CCDC9Q9Y3X0 531 aaKnown RBP26.68■■□□□ 1.86
UBXN1-211ENST00000531056 TMF1P82094 1093 aa26.67■■□□□ 1.86
UBXN1-211ENST00000531056 HDGFL2Q7Z4V5 671 aaPredicted RBP26.67■■□□□ 1.86
UBXN1-211ENST00000531056 COL18A1P39060 1754 aa26.66■■□□□ 1.86
UBXN1-211ENST00000531056 NFAT5O94916 1531 aa26.66■■□□□ 1.86
UBXN1-211ENST00000531056 ONECUT3O60422 494 aaPredicted RBP26.66■■□□□ 1.86
UBXN1-211ENST00000531056 SPATA31A5Q5VU36 1347 aa26.65■■□□□ 1.86
UBXN1-211ENST00000531056 SPATA31A7Q8IWB4 1347 aa26.65■■□□□ 1.86
UBXN1-211ENST00000531056 TERF2IPQ9NYB0 399 aa26.65■■□□□ 1.86
UBXN1-211ENST00000531056 USP31Q70CQ4 1352 aa26.65■■□□□ 1.86
UBXN1-211ENST00000531056 THSD7AQ9UPZ6 1657 aa26.65■■□□□ 1.86
UBXN1-211ENST00000531056 MYOM1P52179 1685 aa26.63■■□□□ 1.85
UBXN1-211ENST00000531056 SUGP2Q8IX01 1082 aaKnown RBP eCLIP26.63■■□□□ 1.85
UBXN1-211ENST00000531056 COL5A2P05997 1499 aaPredicted RBP26.62■■□□□ 1.85
UBXN1-211ENST00000531056 SEPT12Q8IYM1 358 aa26.62■■□□□ 1.85
UBXN1-211ENST00000531056 AATKQ6ZMQ8 1374 aa26.61■■□□□ 1.85
UBXN1-211ENST00000531056 ANKRD36BQ8N2N9 1353 aa26.6■■□□□ 1.85
UBXN1-211ENST00000531056 NME9Q86XW9 330 aa26.6■■□□□ 1.85
UBXN1-211ENST00000531056 STRN4Q9NRL3 753 aa26.6■■□□□ 1.85
UBXN1-211ENST00000531056 ZRANB1Q9UGI0 708 aa26.6■■□□□ 1.85
UBXN1-211ENST00000531056 SPATA31A1Q5TZJ5 1347 aa26.6■■□□□ 1.85
UBXN1-211ENST00000531056 FAM98CQ17RN3 349 aaKnown RBP26.59■■□□□ 1.85
UBXN1-211ENST00000531056 KCNH5Q8NCM2 988 aa26.59■■□□□ 1.85
UBXN1-211ENST00000531056 OVOS2A0A0J9YW53 1432 aa26.58■■□□□ 1.85
UBXN1-211ENST00000531056 OVOS2Q6IE36 1432 aa26.58■■□□□ 1.85
UBXN1-211ENST00000531056 ABCC6O95255 1503 aa26.57■■□□□ 1.84
UBXN1-211ENST00000531056 CDCA8Q53HL2 280 aa26.57■■□□□ 1.84
UBXN1-211ENST00000531056 ARHGEF25Q86VW2 580 aa26.57■■□□□ 1.84
UBXN1-211ENST00000531056 RGPD5Q99666 1765 aa26.56■■□□□ 1.84
UBXN1-211ENST00000531056 EP400Q96L91 3159 aa26.55■■□□□ 1.84
UBXN1-211ENST00000531056 EVA1CP58658 441 aa26.55■■□□□ 1.84
UBXN1-211ENST00000531056 LARP1Q6PKG0 1096 aaKnown RBP26.55■■□□□ 1.84
UBXN1-211ENST00000531056 LTN1O94822 1766 aa26.55■■□□□ 1.84
UBXN1-211ENST00000531056 ZBTB7CA1YPR0 619 aa26.54■■□□□ 1.84
UBXN1-211ENST00000531056 SOX12O15370 315 aa26.53■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms