RNA–Protein interactions for RNA: ENST00000530701.1

FGFR1-235, Transcript of fibroblast growth factor receptor 1, humanhuman

TSL 1 (best)

Gene FGFR1, Length 276 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR1-235ENST00000530701 USP17L11C9JVI0 530 aa3.33□□□□□ -1.88
FGFR1-235ENST00000530701 USP17L21D6R901 530 aa3.33□□□□□ -1.88
FGFR1-235ENST00000530701 USP17L18D6R9N7 530 aa3.33□□□□□ -1.88
FGFR1-235ENST00000530701 USP17L22D6RA61 530 aa3.33□□□□□ -1.88
FGFR1-235ENST00000530701 USP17L17D6RBQ6 530 aa3.33□□□□□ -1.88
FGFR1-235ENST00000530701 USP17L19D6RCP7 530 aa3.33□□□□□ -1.88
FGFR1-235ENST00000530701 USP17L20D6RJB6 530 aa3.33□□□□□ -1.88
FGFR1-235ENST00000530701 LZTS3O60299 673 aaPredicted RBP3.33□□□□□ -1.88
FGFR1-235ENST00000530701 FBXO45P0C2W1 286 aa3.33□□□□□ -1.88
FGFR1-235ENST00000530701 RASA1P20936 1047 aa3.33□□□□□ -1.88
FGFR1-235ENST00000530701 PSEN2P49810 448 aa3.33□□□□□ -1.88
FGFR1-235ENST00000530701 MCCD1P59942 119 aaPredicted RBP3.33□□□□□ -1.88
FGFR1-235ENST00000530701 PTK2Q05397 1052 aa3.33□□□□□ -1.88
FGFR1-235ENST00000530701 USP17L24Q0WX57 530 aa3.33□□□□□ -1.88
FGFR1-235ENST00000530701 PUS10Q3MIT2 529 aaKnown RBP3.33□□□□□ -1.88
FGFR1-235ENST00000530701 MORN1Q5T089 497 aa3.33□□□□□ -1.88
FGFR1-235ENST00000530701 TMEM164Q5U3C3 297 aa3.33□□□□□ -1.88
FGFR1-235ENST00000530701 LYPD8Q6UX82 237 aa3.33□□□□□ -1.88
FGFR1-235ENST00000530701 RNF135Q8IUD6 432 aa3.33□□□□□ -1.88
FGFR1-235ENST00000530701 PLEKHM2Q8IWE5 1019 aa3.33□□□□□ -1.88
FGFR1-235ENST00000530701 STK32AQ8WU08 396 aa3.33□□□□□ -1.88
FGFR1-235ENST00000530701 USB1Q9BQ65 265 aaKnown RBP3.33□□□□□ -1.88
FGFR1-235ENST00000530701 SLC4A5Q9BY07 1137 aa3.33□□□□□ -1.88
FGFR1-235ENST00000530701 BIN2Q9UBW5 565 aaPredicted RBP3.33□□□□□ -1.88
FGFR1-235ENST00000530701 MKRN1Q9UHC7 482 aaKnown RBP3.33□□□□□ -1.88
FGFR1-235ENST00000530701 ERBB3P21860 1342 aa3.33□□□□□ -1.88
FGFR1-235ENST00000530701 GOLGA8CPA6NN73 597 aa3.32□□□□□ -1.88
FGFR1-235ENST00000530701 ACTN4O43707 911 aaKnown RBP3.32□□□□□ -1.88
FGFR1-235ENST00000530701 NR1I2O75469 434 aa3.32□□□□□ -1.88
FGFR1-235ENST00000530701 FMNL1O95466 1100 aaPredicted RBP3.32□□□□□ -1.88
FGFR1-235ENST00000530701 PBX2P40425 430 aa3.32□□□□□ -1.88
FGFR1-235ENST00000530701 ATP1A2P50993 1020 aa3.32□□□□□ -1.88
FGFR1-235ENST00000530701 PTPRNQ16849 979 aa3.32□□□□□ -1.88
FGFR1-235ENST00000530701 EML3Q32P44 896 aa3.32□□□□□ -1.88
FGFR1-235ENST00000530701 KANK4Q5T7N3 995 aaPredicted RBP3.32□□□□□ -1.88
FGFR1-235ENST00000530701 NBPF14Q5TI25 921 aa3.32□□□□□ -1.88
FGFR1-235ENST00000530701 TRIM50Q86XT4 487 aa3.32□□□□□ -1.88
FGFR1-235ENST00000530701 DEPDC4Q8N2C3 294 aa3.32□□□□□ -1.88
FGFR1-235ENST00000530701 MRPL50Q8N5N7 158 aaKnown RBP3.32□□□□□ -1.88
FGFR1-235ENST00000530701 CDCA7Q9BWT1 371 aaPredicted RBP3.32□□□□□ -1.88
FGFR1-235ENST00000530701 USP35Q9P2H5 1018 aa3.32□□□□□ -1.88
FGFR1-235ENST00000530701 SLC27A5Q9Y2P5 690 aa3.32□□□□□ -1.88
FGFR1-235ENST00000530701 PCDHB9Q9Y5E1 797 aa3.32□□□□□ -1.88
FGFR1-235ENST00000530701 PIK3CDO00329 1044 aa3.31□□□□□ -1.88
FGFR1-235ENST00000530701 ATP2B4P23634 1241 aa3.31□□□□□ -1.88
FGFR1-235ENST00000530701 MARSP56192 900 aaKnown RBP3.31□□□□□ -1.88
FGFR1-235ENST00000530701 PPP4CP60510 307 aa3.31□□□□□ -1.88
FGFR1-235ENST00000530701 NCOA4Q13772 614 aa3.31□□□□□ -1.88
FGFR1-235ENST00000530701 SWI5Q1ZZU3 235 aa3.31□□□□□ -1.88
FGFR1-235ENST00000530701 MAP7D1Q3KQU3 841 aa3.31□□□□□ -1.88
FGFR1-235ENST00000530701 GPKOWQ92917 476 aaPredicted RBP eCLIP3.31□□□□□ -1.88
FGFR1-235ENST00000530701 ZFRQ96KR1 1074 aaKnown RBP3.31□□□□□ -1.88
FGFR1-235ENST00000530701 CDKN2AIPQ9NXV6 580 aaPredicted RBP3.31□□□□□ -1.88
FGFR1-235ENST00000530701 ZMIZ1Q9ULJ6 1067 aa3.31□□□□□ -1.88
FGFR1-235ENST00000530701 GPSM3Q9Y4H4 160 aa3.31□□□□□ -1.88
FGFR1-235ENST00000530701 RBM47A0AV96 593 aaKnown RBP3.3□□□□□ -1.88
FGFR1-235ENST00000530701 CCNYL3P0C7X3 344 aa3.3□□□□□ -1.88
FGFR1-235ENST00000530701 JUNDP17535 347 aa3.3□□□□□ -1.88
FGFR1-235ENST00000530701 SSFA2P28290 1259 aa3.3□□□□□ -1.88
FGFR1-235ENST00000530701 CRTC2Q53ET0 693 aaPredicted RBP3.3□□□□□ -1.88
FGFR1-235ENST00000530701 VARS2Q5ST30 1063 aaKnown RBP3.3□□□□□ -1.88
FGFR1-235ENST00000530701 ZBTB33Q86T24 672 aa3.3□□□□□ -1.88
FGFR1-235ENST00000530701 ANKMY2Q8IV38 441 aa3.3□□□□□ -1.88
FGFR1-235ENST00000530701 OGFOD1Q8N543 542 aa3.3□□□□□ -1.88
FGFR1-235ENST00000530701 PLPP7Q8NBV4 271 aa3.3□□□□□ -1.88
FGFR1-235ENST00000530701 ANKK1Q8NFD2 765 aa3.3□□□□□ -1.88
FGFR1-235ENST00000530701 SP7Q8TDD2 431 aaPredicted RBP3.3□□□□□ -1.88
FGFR1-235ENST00000530701 ZNF594Q96JF6 807 aaPredicted RBP3.3□□□□□ -1.88
FGFR1-235ENST00000530701 BCL2L13Q9BXK5 485 aa3.3□□□□□ -1.88
FGFR1-235ENST00000530701 MAP10Q9P2G4 905 aa3.3□□□□□ -1.88
FGFR1-235ENST00000530701 CEP126Q9P2H0 1117 aa3.3□□□□□ -1.88
FGFR1-235ENST00000530701 NOD1Q9Y239 953 aa3.3□□□□□ -1.88
FGFR1-235ENST00000530701 VPS9D1Q9Y2B5 631 aa3.3□□□□□ -1.88
FGFR1-235ENST00000530701 SALL2Q9Y467 1007 aaPredicted RBP3.3□□□□□ -1.88
FGFR1-235ENST00000530701 PCDHB3Q9Y5E6 796 aa3.3□□□□□ -1.88
FGFR1-235ENST00000530701 SOWAHDA6NJG2 315 aa3.29□□□□□ -1.88
FGFR1-235ENST00000530701 ABL1P00519 1130 aa3.29□□□□□ -1.88
FGFR1-235ENST00000530701 F12P00748 615 aaPredicted RBP3.29□□□□□ -1.88
FGFR1-235ENST00000530701 PSME1Q06323 249 aa3.29□□□□□ -1.88
FGFR1-235ENST00000530701 DPYDQ12882 1025 aa3.29□□□□□ -1.88
FGFR1-235ENST00000530701 PTK7Q13308 1070 aa3.29□□□□□ -1.88
FGFR1-235ENST00000530701 ZNF326Q5BKZ1 582 aaKnown RBP3.29□□□□□ -1.88
FGFR1-235ENST00000530701 DMRTA1Q5VZB9 504 aa3.29□□□□□ -1.88
FGFR1-235ENST00000530701 PDXDC2PQ6P474 469 aa3.29□□□□□ -1.88
FGFR1-235ENST00000530701 BLOC1S3Q6QNY0 202 aa3.29□□□□□ -1.88
FGFR1-235ENST00000530701 RNF19BQ6ZMZ0 732 aa3.29□□□□□ -1.88
FGFR1-235ENST00000530701 TXNDC2Q86VQ3 553 aa3.29□□□□□ -1.88
FGFR1-235ENST00000530701 DZIP3Q86Y13 1208 aaKnown RBP3.29□□□□□ -1.88
FGFR1-235ENST00000530701 FAM174AQ8TBP5 190 aa3.29□□□□□ -1.88
FGFR1-235ENST00000530701 CLP1Q92989 425 aaKnown RBP3.29□□□□□ -1.88
FGFR1-235ENST00000530701 SIRT1Q96EB6 747 aa3.29□□□□□ -1.88
FGFR1-235ENST00000530701 ARHGAP9Q9BRR9 750 aa3.29□□□□□ -1.88
FGFR1-235ENST00000530701 DNAAF2Q9NVR5 837 aaKnown RBP3.29□□□□□ -1.88
FGFR1-235ENST00000530701 DOLKQ9UPQ8 538 aa3.29□□□□□ -1.88
FGFR1-235ENST00000530701 AXIN2Q9Y2T1 843 aa3.29□□□□□ -1.88
FGFR1-235ENST00000530701 IGSF3O75054 1194 aa3.28□□□□□ -1.88
FGFR1-235ENST00000530701 HMGB1P09429 215 aaKnown RBP3.28□□□□□ -1.88
FGFR1-235ENST00000530701 AGERQ15109 404 aa3.28□□□□□ -1.88
FGFR1-235ENST00000530701 OXLD1Q5BKU9 147 aa3.28□□□□□ -1.88
FGFR1-235ENST00000530701 RNF20Q5VTR2 975 aa3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms