RNA–Protein interactions for RNA: ENST00000530521.1

USP35-205, Transcript of ubiquitin specific peptidase 35, humanhuman

TSL 2

Gene USP35, Length 598 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP35-205ENST00000530521 SPATA31A5Q5VU36 1347 aa12.83□□□□□ -0.36
USP35-205ENST00000530521 SPATA31A7Q8IWB4 1347 aa12.83□□□□□ -0.36
USP35-205ENST00000530521 PRR36Q9H6K5 1346 aa12.83□□□□□ -0.36
USP35-205ENST00000530521 CHRNA2Q15822 529 aa12.82□□□□□ -0.36
USP35-205ENST00000530521 NUTM2GQ5VZR2 741 aa12.82□□□□□ -0.36
USP35-205ENST00000530521 RGPD1P0DJD0 1748 aa12.82□□□□□ -0.36
USP35-205ENST00000530521 ALS2Q96Q42 1657 aa12.81□□□□□ -0.36
USP35-205ENST00000530521 STRN4Q9NRL3 753 aa12.81□□□□□ -0.36
USP35-205ENST00000530521 USP35Q9P2H5 1018 aa12.81□□□□□ -0.36
USP35-205ENST00000530521 COL14A1Q05707 1796 aaKnown RBP12.81□□□□□ -0.36
USP35-205ENST00000530521 NGDNQ8NEJ9 315 aaKnown RBP12.8□□□□□ -0.36
USP35-205ENST00000530521 ACIN1Q9UKV3 1341 aaKnown RBP12.8□□□□□ -0.36
USP35-205ENST00000530521 TNS1Q9HBL0 1735 aaKnown RBP12.79□□□□□ -0.36
USP35-205ENST00000530521 APBA3O96018 575 aa12.79□□□□□ -0.36
USP35-205ENST00000530521 ZC3H6P61129 1189 aaKnown RBP12.79□□□□□ -0.36
USP35-205ENST00000530521 CAMKK2Q96RR4 588 aa12.79□□□□□ -0.36
USP35-205ENST00000530521 PRDM11Q9NQV5 511 aa12.79□□□□□ -0.36
USP35-205ENST00000530521 GPRASP1Q5JY77 1395 aa12.79□□□□□ -0.36
USP35-205ENST00000530521 WASLO00401 505 aaPredicted RBP12.78□□□□□ -0.36
USP35-205ENST00000530521 CRYBG1Q9Y4K1 1723 aa12.78□□□□□ -0.36
USP35-205ENST00000530521 SPATA31A1Q5TZJ5 1347 aa12.77□□□□□ -0.37
USP35-205ENST00000530521 DCAF11Q8TEB1 546 aa12.76□□□□□ -0.37
USP35-205ENST00000530521 ANKARQ7Z5J8 1434 aa12.76□□□□□ -0.37
USP35-205ENST00000530521 THSD7AQ9UPZ6 1657 aa12.76□□□□□ -0.37
USP35-205ENST00000530521 EVA1CP58658 441 aa12.75□□□□□ -0.37
USP35-205ENST00000530521 FAM196AQ6ZSG2 479 aa12.75□□□□□ -0.37
USP35-205ENST00000530521 KIAA0232Q92628 1395 aa12.75□□□□□ -0.37
USP35-205ENST00000530521 DLC1Q96QB1 1528 aa12.75□□□□□ -0.37
USP35-205ENST00000530521 NUDT16Q96DE0 195 aaKnown RBP12.74□□□□□ -0.37
USP35-205ENST00000530521 ADGRB1O14514 1584 aa12.73□□□□□ -0.37
USP35-205ENST00000530521 ADGRB2O60241 1585 aa12.73□□□□□ -0.37
USP35-205ENST00000530521 PDE3BQ13370 1112 aa12.72□□□□□ -0.37
USP35-205ENST00000530521 LARP1Q6PKG0 1096 aaKnown RBP12.72□□□□□ -0.37
USP35-205ENST00000530521 CDK19Q9BWU1 502 aa12.72□□□□□ -0.37
USP35-205ENST00000530521 TULP4Q9NRJ4 1543 aa12.72□□□□□ -0.37
USP35-205ENST00000530521 PHRF1Q9P1Y6 1649 aaKnown RBP12.71□□□□□ -0.37
USP35-205ENST00000530521 YY1P25490 414 aa12.71□□□□□ -0.37
USP35-205ENST00000530521 DISP2A7MBM2 1401 aa12.71□□□□□ -0.38
USP35-205ENST00000530521 NBPF8Q3BBV2 869 aa12.7□□□□□ -0.38
USP35-205ENST00000530521 NUP188Q5SRE5 1749 aa12.7□□□□□ -0.38
USP35-205ENST00000530521 ACEP12821 1306 aa12.69□□□□□ -0.38
USP35-205ENST00000530521 ZBTB7CA1YPR0 619 aa12.69□□□□□ -0.38
USP35-205ENST00000530521 ABTB2Q8N961 1025 aa12.69□□□□□ -0.38
USP35-205ENST00000530521 CAMTA1Q9Y6Y1 1673 aa12.69□□□□□ -0.38
USP35-205ENST00000530521 RREB1Q92766 1687 aa12.68□□□□□ -0.38
USP35-205ENST00000530521 NBPF14Q5TI25 921 aa12.68□□□□□ -0.38
USP35-205ENST00000530521 BARGINQ6ZT62 677 aa12.68□□□□□ -0.38
USP35-205ENST00000530521 ITSN1Q15811 1721 aa12.68□□□□□ -0.38
USP35-205ENST00000530521 ARHGEF28Q8N1W1 1705 aaKnown RBP12.68□□□□□ -0.38
USP35-205ENST00000530521 PTF1AQ7RTS3 328 aa12.67□□□□□ -0.38
USP35-205ENST00000530521 EIF3AQ14152 1382 aaKnown RBP12.67□□□□□ -0.38
USP35-205ENST00000530521 ATP7BP35670 1465 aa12.66□□□□□ -0.38
USP35-205ENST00000530521 SSH2Q76I76 1423 aa12.66□□□□□ -0.38
USP35-205ENST00000530521 TCP11L2Q8N4U5 519 aa12.66□□□□□ -0.38
USP35-205ENST00000530521 PDGFDQ9GZP0 370 aaPredicted RBP12.66□□□□□ -0.38
USP35-205ENST00000530521 PPP1R1BQ9UD71 204 aaPredicted RBP12.66□□□□□ -0.38
USP35-205ENST00000530521 RAB3GAP2Q9H2M9 1393 aa12.66□□□□□ -0.38
USP35-205ENST00000530521 KCNQ2O43526 872 aa12.65□□□□□ -0.38
USP35-205ENST00000530521 SPON1Q9HCB6 807 aa12.65□□□□□ -0.38
USP35-205ENST00000530521 SBF2Q86WG5 1849 aa12.65□□□□□ -0.39
USP35-205ENST00000530521 GCP02774 474 aa12.64□□□□□ -0.39
USP35-205ENST00000530521 ZEB1P37275 1124 aaPredicted RBP12.64□□□□□ -0.39
USP35-205ENST00000530521 CCDC61Q9Y6R9 512 aa12.64□□□□□ -0.39
USP35-205ENST00000530521 PLEKHG3A1L390 1219 aa12.63□□□□□ -0.39
USP35-205ENST00000530521 NBPF1Q3BBV0 1214 aa12.63□□□□□ -0.39
USP35-205ENST00000530521 LMO7Q8WWI1 1683 aa12.62□□□□□ -0.39
USP35-205ENST00000530521 NRKQ7Z2Y5 1582 aa12.62□□□□□ -0.39
USP35-205ENST00000530521 POLR3AO14802 1390 aaPredicted RBP12.62□□□□□ -0.39
USP35-205ENST00000530521 PARD3Q8TEW0 1356 aa12.62□□□□□ -0.39
USP35-205ENST00000530521 CABP2Q9NPB3 220 aa12.62□□□□□ -0.39
USP35-205ENST00000530521 NLRP13Q86W25 1043 aa12.61□□□□□ -0.39
USP35-205ENST00000530521 PROM2Q8N271 834 aa12.61□□□□□ -0.39
USP35-205ENST00000530521 ANO8Q9HCE9 1232 aaPredicted RBP12.61□□□□□ -0.39
USP35-205ENST00000530521 RGPD5Q99666 1765 aa12.61□□□□□ -0.39
USP35-205ENST00000530521 TOPAZ1Q8N9V7 1692 aa12.61□□□□□ -0.39
USP35-205ENST00000530521 ZBTB7AO95365 584 aa12.6□□□□□ -0.39
USP35-205ENST00000530521 SRPK2P78362 688 aaKnown RBP12.6□□□□□ -0.39
USP35-205ENST00000530521 ATF5Q9Y2D1 282 aaPredicted RBP12.6□□□□□ -0.39
USP35-205ENST00000530521 THRAP3Q9Y2W1 955 aaKnown RBP12.6□□□□□ -0.39
USP35-205ENST00000530521 PARP4Q9UKK3 1724 aaKnown RBP12.59□□□□□ -0.39
USP35-205ENST00000530521 DCAF8L1A6NGE4 600 aa12.59□□□□□ -0.39
USP35-205ENST00000530521 AXIN2Q9Y2T1 843 aa12.59□□□□□ -0.39
USP35-205ENST00000530521 USP19O94966 1318 aa12.59□□□□□ -0.39
USP35-205ENST00000530521 CPDO75976 1380 aa12.58□□□□□ -0.4
USP35-205ENST00000530521 NLRP6P59044 892 aa12.58□□□□□ -0.4
USP35-205ENST00000530521 DDB1Q16531 1140 aa12.58□□□□□ -0.4
USP35-205ENST00000530521 TOM1L2Q6ZVM7 507 aa12.58□□□□□ -0.4
USP35-205ENST00000530521 BCL11BQ9C0K0 894 aaPredicted RBP12.58□□□□□ -0.4
USP35-205ENST00000530521 PEAK1Q9H792 1746 aa12.58□□□□□ -0.4
USP35-205ENST00000530521 CABP1Q9NZU7 370 aa12.58□□□□□ -0.4
USP35-205ENST00000530521 KAT6BQ8WYB5 2073 aa12.58□□□□□ -0.4
USP35-205ENST00000530521 COL5A2P05997 1499 aaPredicted RBP12.58□□□□□ -0.4
USP35-205ENST00000530521 PPIP5K1Q6PFW1 1433 aa12.57□□□□□ -0.4
USP35-205ENST00000530521 PLSCR1O15162 318 aa12.57□□□□□ -0.4
USP35-205ENST00000530521 SOX12O15370 315 aa12.57□□□□□ -0.4
USP35-205ENST00000530521 MARCH10Q8NA82 808 aaPredicted RBP12.57□□□□□ -0.4
USP35-205ENST00000530521 CRB1P82279 1406 aa12.56□□□□□ -0.4
USP35-205ENST00000530521 STAC3Q96MF2 364 aa12.56□□□□□ -0.4
USP35-205ENST00000530521 COL18A1P39060 1754 aa12.56□□□□□ -0.4
USP35-205ENST00000530521 CASZ1Q86V15 1759 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms