RNA–Protein interactions for RNA: ENST00000530384.5

CCS-205, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 5

Gene CCS, Length 1,196 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-205ENST00000530384 USP21Q9UK80 565 aa24.14■■□□□ 1.45
CCS-205ENST00000530384 QTRT2Q9H974 415 aaKnown RBP24.13■■□□□ 1.45
CCS-205ENST00000530384 CABP1Q9NZU7 370 aa24.13■■□□□ 1.45
CCS-205ENST00000530384 ATAD2Q6PL18 1390 aa24.13■■□□□ 1.45
CCS-205ENST00000530384 BRD4O60885 1362 aaPredicted RBP24.12■■□□□ 1.45
CCS-205ENST00000530384 PLEKHG5O94827 1062 aa24.11■■□□□ 1.45
CCS-205ENST00000530384 SLC24A1O60721 1099 aa24.09■■□□□ 1.45
CCS-205ENST00000530384 TRPC5Q9UL62 973 aaPredicted RBP24.09■■□□□ 1.45
CCS-205ENST00000530384 CRYBG1Q9Y4K1 1723 aa24.09■■□□□ 1.45
CCS-205ENST00000530384 CDK12Q9NYV4 1490 aaPredicted RBP24.08■■□□□ 1.45
CCS-205ENST00000530384 RBM6P78332 1123 aaKnown RBP24.08■■□□□ 1.45
CCS-205ENST00000530384 SLIT2O94813 1529 aa24.08■■□□□ 1.45
CCS-205ENST00000530384 BCL9LQ86UU0 1499 aa24.07■■□□□ 1.44
CCS-205ENST00000530384 TNKS1BP1Q9C0C2 1729 aaKnown RBP24.07■■□□□ 1.44
CCS-205ENST00000530384 ST20-MTHFSA0A0A6YYL1 179 aa24.07■■□□□ 1.44
CCS-205ENST00000530384 USP6P35125 1406 aa24.07■■□□□ 1.44
CCS-205ENST00000530384 ATRNO75882 1429 aa24.06■■□□□ 1.44
CCS-205ENST00000530384 USP47Q96K76 1375 aa24.05■■□□□ 1.44
CCS-205ENST00000530384 ABTB2Q8N961 1025 aa24.05■■□□□ 1.44
CCS-205ENST00000530384 ZNF692Q9BU19 519 aaPredicted RBP24.05■■□□□ 1.44
CCS-205ENST00000530384 NWD2Q9ULI1 1742 aa24.04■■□□□ 1.44
CCS-205ENST00000530384 AKAP12Q02952 1782 aa24.04■■□□□ 1.44
CCS-205ENST00000530384 UNC5CLQ8IV45 518 aa24.04■■□□□ 1.44
CCS-205ENST00000530384 PUS7Q96PZ0 661 aaKnown RBP24.04■■□□□ 1.44
CCS-205ENST00000530384 TESK2Q96S53 571 aa24.04■■□□□ 1.44
CCS-205ENST00000530384 PLCH1Q4KWH8 1693 aa24.04■■□□□ 1.44
CCS-205ENST00000530384 PHRF1Q9P1Y6 1649 aaKnown RBP24.02■■□□□ 1.44
CCS-205ENST00000530384 NUTM2GQ5VZR2 741 aa24.02■■□□□ 1.44
CCS-205ENST00000530384 FAM83GA6ND36 823 aa24.01■■□□□ 1.43
CCS-205ENST00000530384 NLRP13Q86W25 1043 aa24.01■■□□□ 1.43
CCS-205ENST00000530384 COL14A1Q05707 1796 aaKnown RBP24.01■■□□□ 1.43
CCS-205ENST00000530384 CPSF1Q10570 1443 aaKnown RBP24.01■■□□□ 1.43
CCS-205ENST00000530384 SSH2Q76I76 1423 aa24■■□□□ 1.43
CCS-205ENST00000530384 USP19O94966 1318 aa23.98■■□□□ 1.43
CCS-205ENST00000530384 RGS12O14924 1447 aa23.98■■□□□ 1.43
CCS-205ENST00000530384 KTN1Q86UP2 1357 aaKnown RBP23.97■■□□□ 1.43
CCS-205ENST00000530384 TMC1Q8TDI8 760 aa23.97■■□□□ 1.43
CCS-205ENST00000530384 GJD4Q96KN9 370 aaPredicted RBP23.97■■□□□ 1.43
CCS-205ENST00000530384 PRDM11Q9NQV5 511 aa23.97■■□□□ 1.43
CCS-205ENST00000530384 MON2Q7Z3U7 1717 aa23.96■■□□□ 1.43
CCS-205ENST00000530384 NRKQ7Z2Y5 1582 aa23.95■■□□□ 1.43
CCS-205ENST00000530384 NINLQ9Y2I6 1382 aa23.95■■□□□ 1.42
CCS-205ENST00000530384 TTC21BQ7Z4L5 1316 aa23.95■■□□□ 1.42
CCS-205ENST00000530384 TTC21AQ8NDW8 1320 aa23.95■■□□□ 1.42
CCS-205ENST00000530384 NLRP6P59044 892 aa23.95■■□□□ 1.42
CCS-205ENST00000530384 TMF1P82094 1093 aa23.95■■□□□ 1.42
CCS-205ENST00000530384 KIAA0232Q92628 1395 aa23.94■■□□□ 1.42
CCS-205ENST00000530384 NRAPQ86VF7 1730 aa23.94■■□□□ 1.42
CCS-205ENST00000530384 VPS72Q15906 364 aa23.94■■□□□ 1.42
CCS-205ENST00000530384 HDGFL2Q7Z4V5 671 aaPredicted RBP23.94■■□□□ 1.42
CCS-205ENST00000530384 BTG4Q9NY30 223 aa23.94■■□□□ 1.42
CCS-205ENST00000530384 PIK3C2AO00443 1686 aa23.94■■□□□ 1.42
CCS-205ENST00000530384 SLC12A5Q9H2X9 1139 aa23.93■■□□□ 1.42
CCS-205ENST00000530384 TERF2IPQ9NYB0 399 aa23.93■■□□□ 1.42
CCS-205ENST00000530384 CD163L1Q9NR16 1453 aa23.93■■□□□ 1.42
CCS-205ENST00000530384 ZC3H6P61129 1189 aaKnown RBP23.92■■□□□ 1.42
CCS-205ENST00000530384 CPDO75976 1380 aa23.91■■□□□ 1.42
CCS-205ENST00000530384 GLI3P10071 1580 aa23.91■■□□□ 1.42
CCS-205ENST00000530384 GCP02774 474 aa23.91■■□□□ 1.42
CCS-205ENST00000530384 CDCA8Q53HL2 280 aa23.91■■□□□ 1.42
CCS-205ENST00000530384 SLIT3O75094 1523 aa23.9■■□□□ 1.42
CCS-205ENST00000530384 CCDC9Q9Y3X0 531 aaKnown RBP23.9■■□□□ 1.42
CCS-205ENST00000530384 CHRNA2Q15822 529 aa23.88■■□□□ 1.41
CCS-205ENST00000530384 A0A1W2PP64 1363 aa23.88■■□□□ 1.41
CCS-205ENST00000530384 EDC4Q6P2E9 1401 aaKnown RBP23.87■■□□□ 1.41
CCS-205ENST00000530384 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.85■■□□□ 1.41
CCS-205ENST00000530384 KCNH5Q8NCM2 988 aa23.85■■□□□ 1.41
CCS-205ENST00000530384 EIF4G2P78344 907 aaKnown RBP eCLIP23.84■■□□□ 1.412e-6■■■■■ 26.9
CCS-205ENST00000530384 USP54Q70EL1 1684 aa23.83■■□□□ 1.41
CCS-205ENST00000530384 LMO7Q8WWI1 1683 aa23.83■■□□□ 1.41
CCS-205ENST00000530384 USP31Q70CQ4 1352 aa23.83■■□□□ 1.41
CCS-205ENST00000530384 ANKRD36BQ8N2N9 1353 aa23.81■■□□□ 1.4
CCS-205ENST00000530384 CAMTA1Q9Y6Y1 1673 aa23.81■■□□□ 1.4
CCS-205ENST00000530384 ONECUT3O60422 494 aaPredicted RBP23.81■■□□□ 1.4
CCS-205ENST00000530384 SPATA31A5Q5VU36 1347 aa23.81■■□□□ 1.4
CCS-205ENST00000530384 SPATA31A7Q8IWB4 1347 aa23.81■■□□□ 1.4
CCS-205ENST00000530384 EVA1CP58658 441 aa23.8■■□□□ 1.4
CCS-205ENST00000530384 NME9Q86XW9 330 aa23.8■■□□□ 1.4
CCS-205ENST00000530384 UPF1Q92900 1129 aaKnown RBP eCLIP23.8■■□□□ 1.4
CCS-205ENST00000530384 STRN4Q9NRL3 753 aa23.8■■□□□ 1.4
CCS-205ENST00000530384 AATKQ6ZMQ8 1374 aa23.79■■□□□ 1.4
CCS-205ENST00000530384 SEPT12Q8IYM1 358 aa23.79■■□□□ 1.4
CCS-205ENST00000530384 ZBTB7CA1YPR0 619 aa23.78■■□□□ 1.4
CCS-205ENST00000530384 HSPA5P11021 654 aaKnown RBP23.77■■□□□ 1.4
CCS-205ENST00000530384 NFAT5O94916 1531 aa23.77■■□□□ 1.4
CCS-205ENST00000530384 BRWD3Q6RI45 1802 aa23.77■■□□□ 1.4
CCS-205ENST00000530384 FAM98CQ17RN3 349 aaKnown RBP23.76■■□□□ 1.39
CCS-205ENST00000530384 ARHGEF25Q86VW2 580 aa23.76■■□□□ 1.39
CCS-205ENST00000530384 ZRANB1Q9UGI0 708 aa23.76■■□□□ 1.39
CCS-205ENST00000530384 SPATA31A1Q5TZJ5 1347 aa23.76■■□□□ 1.39
CCS-205ENST00000530384 COL18A1P39060 1754 aa23.75■■□□□ 1.39
CCS-205ENST00000530384 COL5A2P05997 1499 aaPredicted RBP23.75■■□□□ 1.39
CCS-205ENST00000530384 SOX12O15370 315 aa23.75■■□□□ 1.39
CCS-205ENST00000530384 MYOM1P52179 1685 aa23.74■■□□□ 1.39
CCS-205ENST00000530384 A0A0G2JS52 829 aa23.74■■□□□ 1.39
CCS-205ENST00000530384 MYT1Q01538 1121 aa23.74■■□□□ 1.39
CCS-205ENST00000530384 OVOS2A0A0J9YW53 1432 aa23.74■■□□□ 1.39
CCS-205ENST00000530384 OVOS2Q6IE36 1432 aa23.74■■□□□ 1.39
CCS-205ENST00000530384 ABCC6O95255 1503 aa23.73■■□□□ 1.39
CCS-205ENST00000530384 LARP1Q6PKG0 1096 aaKnown RBP23.72■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms