RNA–Protein interactions for RNA: ENST00000530378.5

SOX6-213, Transcript of SRY-box 6, humanhuman

TSL 2

Gene SOX6, Length 1,818 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-213ENST00000530378 ROBO1Q9Y6N7 1651 aa14.56□□□□□ -0.08
SOX6-213ENST00000530378 ANP32CO43423 234 aa14.56□□□□□ -0.08
SOX6-213ENST00000530378 AMER1Q5JTC6 1135 aaPredicted RBP14.55□□□□□ -0.08
SOX6-213ENST00000530378 PPP4R3CPQ6ZMV5 832 aa14.55□□□□□ -0.08
SOX6-213ENST00000530378 EDC4Q6P2E9 1401 aaKnown RBP14.55□□□□□ -0.08
SOX6-213ENST00000530378 SCAF1Q9H7N4 1312 aaKnown RBP14.55□□□□□ -0.08
SOX6-213ENST00000530378 ANKRD26Q9UPS8 1709 aa14.55□□□□□ -0.08
SOX6-213ENST00000530378 PAK3O75914 559 aaPredicted RBP14.55□□□□□ -0.08
SOX6-213ENST00000530378 PLEKHG5O94827 1062 aa14.55□□□□□ -0.08
SOX6-213ENST00000530378 BRINP3Q76B58 766 aa14.55□□□□□ -0.08
SOX6-213ENST00000530378 NME9Q86XW9 330 aa14.55□□□□□ -0.08
SOX6-213ENST00000530378 GGNBP2Q9H3C7 697 aa14.55□□□□□ -0.08
SOX6-213ENST00000530378 ZRANB1Q9UGI0 708 aa14.55□□□□□ -0.08
SOX6-213ENST00000530378 CGNL1Q0VF96 1302 aa14.54□□□□□ -0.08
SOX6-213ENST00000530378 PIK3C2AO00443 1686 aa14.54□□□□□ -0.08
SOX6-213ENST00000530378 TNNT2P45379 298 aaPredicted RBP14.53□□□□□ -0.08
SOX6-213ENST00000530378 PIP4K2BP78356 416 aa14.53□□□□□ -0.08
SOX6-213ENST00000530378 PSME1Q06323 249 aa14.53□□□□□ -0.08
SOX6-213ENST00000530378 NUTM2GQ5VZR2 741 aa14.53□□□□□ -0.08
SOX6-213ENST00000530378 TRPM3Q9HCF6 1732 aaPredicted RBP14.53□□□□□ -0.08
SOX6-213ENST00000530378 TTC21BQ7Z4L5 1316 aa14.53□□□□□ -0.08
SOX6-213ENST00000530378 PRKRIP1Q9H875 184 aaPredicted RBP14.52□□□□□ -0.08
SOX6-213ENST00000530378 UBAP1LF5GYI3 381 aa14.52□□□□□ -0.09
SOX6-213ENST00000530378 ZNF692Q9BU19 519 aaPredicted RBP14.52□□□□□ -0.09
SOX6-213ENST00000530378 NHSL1Q5SYE7 1610 aa14.51□□□□□ -0.09
SOX6-213ENST00000530378 FYB1O15117 783 aa14.5□□□□□ -0.09
SOX6-213ENST00000530378 LMOD2Q6P5Q4 547 aa14.5□□□□□ -0.09
SOX6-213ENST00000530378 SSH2Q76I76 1423 aa14.5□□□□□ -0.09
SOX6-213ENST00000530378 MARF1Q9Y4F3 1742 aaKnown RBP14.5□□□□□ -0.09
SOX6-213ENST00000530378 SOX12O15370 315 aa14.5□□□□□ -0.09
SOX6-213ENST00000530378 KRT28Q7Z3Y7 464 aa14.5□□□□□ -0.09
SOX6-213ENST00000530378 PXDNQ92626 1479 aa14.49□□□□□ -0.09
SOX6-213ENST00000530378 PARD3Q8TEW0 1356 aa14.49□□□□□ -0.09
SOX6-213ENST00000530378 MORC1Q86VD1 984 aa14.49□□□□□ -0.09
SOX6-213ENST00000530378 NPHP3Q7Z494 1330 aa14.48□□□□□ -0.09
SOX6-213ENST00000530378 FBLN1P23142 703 aa14.48□□□□□ -0.09
SOX6-213ENST00000530378 ALS2Q96Q42 1657 aa14.48□□□□□ -0.09
SOX6-213ENST00000530378 TOM1O60784 492 aa14.47□□□□□ -0.09
SOX6-213ENST00000530378 ABTB2Q8N961 1025 aa14.47□□□□□ -0.09
SOX6-213ENST00000530378 NSD2O96028 1365 aa14.47□□□□□ -0.09
SOX6-213ENST00000530378 NPC1L1Q9UHC9 1359 aa14.47□□□□□ -0.09
SOX6-213ENST00000530378 PHLPP1O60346 1717 aa14.46□□□□□ -0.09
SOX6-213ENST00000530378 CCDC184Q52MB2 194 aa14.45□□□□□ -0.1
SOX6-213ENST00000530378 COG3Q96JB2 828 aa14.45□□□□□ -0.1
SOX6-213ENST00000530378 TTC21AQ8NDW8 1320 aa14.45□□□□□ -0.1
SOX6-213ENST00000530378 OVOS2A0A0J9YW53 1432 aa14.45□□□□□ -0.1
SOX6-213ENST00000530378 OVOS2Q6IE36 1432 aa14.45□□□□□ -0.1
SOX6-213ENST00000530378 MED1Q15648 1581 aaPredicted RBP14.45□□□□□ -0.1
SOX6-213ENST00000530378 NLRP6P59044 892 aa14.45□□□□□ -0.1
SOX6-213ENST00000530378 RALBP1Q15311 655 aa14.45□□□□□ -0.1
SOX6-213ENST00000530378 MAP2P11137 1827 aaKnown RBP14.45□□□□□ -0.1
SOX6-213ENST00000530378 MYBBP1AQ9BQG0 1328 aaKnown RBP14.44□□□□□ -0.1
SOX6-213ENST00000530378 TNS3Q68CZ2 1445 aa14.44□□□□□ -0.1
SOX6-213ENST00000530378 PPP2R1AP30153 589 aa14.43□□□□□ -0.1
SOX6-213ENST00000530378 AHDC1Q5TGY3 1603 aaPredicted RBP14.43□□□□□ -0.1
SOX6-213ENST00000530378 USP54Q70EL1 1684 aa14.43□□□□□ -0.1
SOX6-213ENST00000530378 SOS2Q07890 1332 aaPredicted RBP14.41□□□□□ -0.1
SOX6-213ENST00000530378 MAPK8IP2Q13387 824 aaPredicted RBP14.41□□□□□ -0.1
SOX6-213ENST00000530378 COL16A1Q07092 1604 aaPredicted RBP14.41□□□□□ -0.1
SOX6-213ENST00000530378 LTN1O94822 1766 aa14.41□□□□□ -0.1
SOX6-213ENST00000530378 SBNO1A3KN83 1393 aa14.41□□□□□ -0.1
SOX6-213ENST00000530378 SPATA31A3Q5VYP0 1347 aa14.41□□□□□ -0.1
SOX6-213ENST00000530378 ZBTB7CA1YPR0 619 aa14.41□□□□□ -0.1
SOX6-213ENST00000530378 RRS1Q15050 365 aaKnown RBP14.41□□□□□ -0.1
SOX6-213ENST00000530378 CABLES1Q8TDN4 633 aa14.41□□□□□ -0.1
SOX6-213ENST00000530378 PHRF1Q9P1Y6 1649 aaKnown RBP14.41□□□□□ -0.1
SOX6-213ENST00000530378 CRYBG1Q9Y4K1 1723 aa14.4□□□□□ -0.1
SOX6-213ENST00000530378 BRD4O60885 1362 aaPredicted RBP14.4□□□□□ -0.1
SOX6-213ENST00000530378 PPM1GO15355 546 aaPredicted RBP14.4□□□□□ -0.1
SOX6-213ENST00000530378 MRS2Q9HD23 443 aa14.4□□□□□ -0.1
SOX6-213ENST00000530378 ABCA3Q99758 1704 aa14.4□□□□□ -0.1
SOX6-213ENST00000530378 USP31Q70CQ4 1352 aa14.39□□□□□ -0.11
SOX6-213ENST00000530378 EMILIN1Q9Y6C2 1016 aa14.39□□□□□ -0.11
SOX6-213ENST00000530378 PEAK1Q9H792 1746 aa14.39□□□□□ -0.11
SOX6-213ENST00000530378 KCNA4P22459 653 aa14.38□□□□□ -0.11
SOX6-213ENST00000530378 NLRP13Q86W25 1043 aa14.38□□□□□ -0.11
SOX6-213ENST00000530378 NFAT5O94916 1531 aa14.37□□□□□ -0.11
SOX6-213ENST00000530378 MTHFSP49914 203 aa14.37□□□□□ -0.11
SOX6-213ENST00000530378 SLIT3O75094 1523 aa14.37□□□□□ -0.11
SOX6-213ENST00000530378 ARHGEF10O15013 1369 aa14.37□□□□□ -0.11
SOX6-213ENST00000530378 CCER2I3L3R5 266 aa14.36□□□□□ -0.11
SOX6-213ENST00000530378 POLKQ9UBT6 870 aa14.35□□□□□ -0.11
SOX6-213ENST00000530378 USP19O94966 1318 aa14.35□□□□□ -0.11
SOX6-213ENST00000530378 HSPA1LP34931 641 aa14.34□□□□□ -0.11
SOX6-213ENST00000530378 MAP3K19Q56UN5 1328 aa14.34□□□□□ -0.11
SOX6-213ENST00000530378 SHPRHQ149N8 1683 aa14.34□□□□□ -0.11
SOX6-213ENST00000530378 HAP1P54257 671 aaPredicted RBP14.34□□□□□ -0.11
SOX6-213ENST00000530378 ZC3H6P61129 1189 aaKnown RBP14.34□□□□□ -0.11
SOX6-213ENST00000530378 RGPD5Q99666 1765 aa14.33□□□□□ -0.12
SOX6-213ENST00000530378 AATKQ6ZMQ8 1374 aa14.33□□□□□ -0.12
SOX6-213ENST00000530378 GCP02774 474 aa14.33□□□□□ -0.12
SOX6-213ENST00000530378 FAM9BQ8IZU0 186 aa14.33□□□□□ -0.12
SOX6-213ENST00000530378 LRRC59Q96AG4 307 aaKnown RBP14.33□□□□□ -0.12
SOX6-213ENST00000530378 PNPLA6Q8IY17 1366 aa14.32□□□□□ -0.12
SOX6-213ENST00000530378 YTHDC1Q96MU7 727 aaKnown RBP14.31□□□□□ -0.12
SOX6-213ENST00000530378 SMG6Q86US8 1419 aaKnown RBP14.31□□□□□ -0.12
SOX6-213ENST00000530378 COL3A1P02461 1466 aaPredicted RBP14.31□□□□□ -0.12
SOX6-213ENST00000530378 CDK12Q9NYV4 1490 aaPredicted RBP14.31□□□□□ -0.12
SOX6-213ENST00000530378 COL22A1Q8NFW1 1626 aaPredicted RBP14.31□□□□□ -0.12
SOX6-213ENST00000530378 SENP3-EIF4A1A0A087X0R7 540 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms