RNA–Protein interactions for RNA: ENST00000530369.1

USP47-210, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 4

Gene USP47, Length 574 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-210ENST00000530369 Q6ZNB5 142 aa7.21□□□□□ -1.26
USP47-210ENST00000530369 FKBPLQ9UIM3 349 aa7.21□□□□□ -1.26
USP47-210ENST00000530369 LAPTM4AQ15012 233 aa7.2□□□□□ -1.26
USP47-210ENST00000530369 AGERQ15109 404 aa7.2□□□□□ -1.26
USP47-210ENST00000530369 FBXO31Q5XUX0 539 aaPredicted RBP7.2□□□□□ -1.26
USP47-210ENST00000530369 ZNF511Q8NB15 262 aa7.2□□□□□ -1.26
USP47-210ENST00000530369 NDUFB9Q9Y6M9 179 aa7.2□□□□□ -1.26
USP47-210ENST00000530369 PTCRAQ6ISU1 281 aaPredicted RBP7.19□□□□□ -1.26
USP47-210ENST00000530369 BPHLQ86WA6 291 aaPredicted RBP7.19□□□□□ -1.26
USP47-210ENST00000530369 EHBP1Q8NDI1 1231 aa7.19□□□□□ -1.26
USP47-210ENST00000530369 ZNF592Q92610 1267 aa7.19□□□□□ -1.26
USP47-210ENST00000530369 WNT7AO00755 349 aa7.18□□□□□ -1.26
USP47-210ENST00000530369 NR6A1Q15406 480 aa7.18□□□□□ -1.26
USP47-210ENST00000530369 LINC01559Q495D7 138 aa7.18□□□□□ -1.26
USP47-210ENST00000530369 WWC1Q8IX03 1113 aa7.18□□□□□ -1.26
USP47-210ENST00000530369 BAP1Q92560 729 aa7.18□□□□□ -1.26
USP47-210ENST00000530369 PTK2Q05397 1052 aa7.17□□□□□ -1.26
USP47-210ENST00000530369 FOXC1Q12948 553 aa7.17□□□□□ -1.26
USP47-210ENST00000530369 FAM174AQ8TBP5 190 aa7.17□□□□□ -1.26
USP47-210ENST00000530369 HMX1Q9NP08 348 aaPredicted RBP7.17□□□□□ -1.26
USP47-210ENST00000530369 ZNF330Q9Y3S2 320 aaPredicted RBP7.17□□□□□ -1.26
USP47-210ENST00000530369 GPSM3Q9Y4H4 160 aa7.17□□□□□ -1.26
USP47-210ENST00000530369 RAD21O60216 631 aa7.16□□□□□ -1.26
USP47-210ENST00000530369 VARSP26640 1264 aaKnown RBP7.16□□□□□ -1.26
USP47-210ENST00000530369 SH3BP2P78314 561 aa7.16□□□□□ -1.26
USP47-210ENST00000530369 PRR20EP86478 221 aa7.16□□□□□ -1.26
USP47-210ENST00000530369 PRR20CP86479 221 aa7.16□□□□□ -1.26
USP47-210ENST00000530369 PRR20DP86480 221 aa7.16□□□□□ -1.26
USP47-210ENST00000530369 PRR20BP86481 221 aa7.16□□□□□ -1.26
USP47-210ENST00000530369 PRR20AP86496 221 aa7.16□□□□□ -1.26
USP47-210ENST00000530369 MCM6Q14566 821 aa7.16□□□□□ -1.26
USP47-210ENST00000530369 RC3H1Q5TC82 1133 aaKnown RBP7.16□□□□□ -1.26
USP47-210ENST00000530369 PDXDC2PQ6P474 469 aa7.16□□□□□ -1.26
USP47-210ENST00000530369 CYP4X1Q8N118 509 aa7.16□□□□□ -1.26
USP47-210ENST00000530369 MTMR14Q8NCE2 650 aa7.16□□□□□ -1.26
USP47-210ENST00000530369 EMID1Q96A84 441 aaPredicted RBP7.16□□□□□ -1.26
USP47-210ENST00000530369 PDZRN3Q9UPQ7 1066 aa7.16□□□□□ -1.26
USP47-210ENST00000530369 ARHGAP9Q9BRR9 750 aa7.15□□□□□ -1.26
USP47-210ENST00000530369 TTC24A2A3L6 582 aaPredicted RBP7.14□□□□□ -1.27
USP47-210ENST00000530369 ZBTB33Q86T24 672 aa7.14□□□□□ -1.27
USP47-210ENST00000530369 TRIM34Q9BYJ4 488 aa7.14□□□□□ -1.27
USP47-210ENST00000530369 SNRKQ9NRH2 765 aa7.14□□□□□ -1.27
USP47-210ENST00000530369 MAGEB6P1A0A0J9YX57 407 aa7.13□□□□□ -1.27
USP47-210ENST00000530369 NRG2O14511 850 aaPredicted RBP7.13□□□□□ -1.27
USP47-210ENST00000530369 UBTFP17480 764 aaKnown RBP7.13□□□□□ -1.27
USP47-210ENST00000530369 SKOR1P84550 965 aa7.13□□□□□ -1.27
USP47-210ENST00000530369 TRAF7Q6Q0C0 670 aa7.13□□□□□ -1.27
USP47-210ENST00000530369 SNIP1Q8TAD8 396 aaKnown RBP7.13□□□□□ -1.27
USP47-210ENST00000530369 GJD4Q96KN9 370 aaPredicted RBP7.13□□□□□ -1.27
USP47-210ENST00000530369 CDV3Q9UKY7 258 aaKnown RBP7.13□□□□□ -1.27
USP47-210ENST00000530369 TNFRSF10AO00220 468 aa7.12□□□□□ -1.27
USP47-210ENST00000530369 GDF9O60383 454 aa7.12□□□□□ -1.27
USP47-210ENST00000530369 GFRA3O60609 400 aa7.12□□□□□ -1.27
USP47-210ENST00000530369 SH3BP5LQ7L8J4 393 aa7.12□□□□□ -1.27
USP47-210ENST00000530369 SLC10A4Q96EP9 437 aa7.12□□□□□ -1.27
USP47-210ENST00000530369 MRGPRX2Q96LB1 330 aa7.12□□□□□ -1.27
USP47-210ENST00000530369 CARD14Q9BXL6 1004 aa7.12□□□□□ -1.27
USP47-210ENST00000530369 EPS8L1Q8TE68 723 aa7.11□□□□□ -1.27
USP47-210ENST00000530369 FOXJ1Q92949 421 aa7.11□□□□□ -1.27
USP47-210ENST00000530369 TRIM52Q96A61 297 aa7.11□□□□□ -1.27
USP47-210ENST00000530369 PKD2L1Q9P0L9 805 aa7.11□□□□□ -1.27
USP47-210ENST00000530369 WASF2Q9Y6W5 498 aa7.11□□□□□ -1.27
USP47-210ENST00000530369 ZBBXA8MT70 800 aa7.1□□□□□ -1.27
USP47-210ENST00000530369 MCCD1P59942 119 aaPredicted RBP7.1□□□□□ -1.27
USP47-210ENST00000530369 WASHC4Q2M389 1173 aa7.1□□□□□ -1.27
USP47-210ENST00000530369 MPNDQ8N594 471 aa7.1□□□□□ -1.27
USP47-210ENST00000530369 ABL2P42684 1182 aa7.09□□□□□ -1.27
USP47-210ENST00000530369 NBPF20Q3BBV1 942 aa7.09□□□□□ -1.27
USP47-210ENST00000530369 PKDCCQ504Y2 493 aa7.09□□□□□ -1.27
USP47-210ENST00000530369 SH3RF1Q7Z6J0 888 aa7.09□□□□□ -1.27
USP47-210ENST00000530369 TRMT44Q8IYL2 757 aaKnown RBP7.09□□□□□ -1.27
USP47-210ENST00000530369 C1QTNF2Q9BXJ5 285 aa7.09□□□□□ -1.27
USP47-210ENST00000530369 TBC1D2BQ9UPU7 963 aa7.09□□□□□ -1.27
USP47-210ENST00000530369 FAM187AA6NFU0 413 aa7.08□□□□□ -1.28
USP47-210ENST00000530369 ALDH1A1P00352 501 aa7.08□□□□□ -1.28
USP47-210ENST00000530369 NR1H3Q13133 447 aa7.08□□□□□ -1.28
USP47-210ENST00000530369 DZIP3Q86Y13 1208 aaKnown RBP7.08□□□□□ -1.28
USP47-210ENST00000530369 MAP4K5Q9Y4K4 846 aa7.08□□□□□ -1.28
USP47-210ENST00000530369 GTF3C3Q9Y5Q9 886 aa7.08□□□□□ -1.28
USP47-210ENST00000530369 DGAT1O75907 488 aa7.07□□□□□ -1.28
USP47-210ENST00000530369 EIF4G2P78344 907 aaKnown RBP eCLIP7.07□□□□□ -1.28
USP47-210ENST00000530369 ARID5BQ14865 1188 aa7.07□□□□□ -1.28
USP47-210ENST00000530369 ERFEQ4G0M1 354 aa7.07□□□□□ -1.28
USP47-210ENST00000530369 TRIM67Q6ZTA4 783 aa7.07□□□□□ -1.28
USP47-210ENST00000530369 ERICH6Q7L0X2 663 aa7.07□□□□□ -1.28
USP47-210ENST00000530369 VASH1Q7L8A9 365 aaPredicted RBP7.07□□□□□ -1.28
USP47-210ENST00000530369 ADAM32Q8TC27 787 aa7.07□□□□□ -1.28
USP47-210ENST00000530369 GDPD2Q9HCC8 539 aa7.07□□□□□ -1.28
USP47-210ENST00000530369 TOR4AQ9NXH8 423 aa7.07□□□□□ -1.28
USP47-210ENST00000530369 ADH1CP00326 375 aa7.06□□□□□ -1.28
USP47-210ENST00000530369 NR5A1Q13285 461 aa7.06□□□□□ -1.28
USP47-210ENST00000530369 CDK15Q96Q40 435 aa7.06□□□□□ -1.28
USP47-210ENST00000530369 COG6Q9Y2V7 657 aa7.06□□□□□ -1.28
USP47-210ENST00000530369 SIAH2O43255 324 aa7.05□□□□□ -1.28
USP47-210ENST00000530369 FBXO45P0C2W1 286 aa7.05□□□□□ -1.28
USP47-210ENST00000530369 SOX11P35716 441 aa7.05□□□□□ -1.28
USP47-210ENST00000530369 C4orf48Q5BLP8 95 aa7.05□□□□□ -1.28
USP47-210ENST00000530369 CCDC125Q86Z20 511 aa7.05□□□□□ -1.28
USP47-210ENST00000530369 PCDHB9Q9Y5E1 797 aa7.05□□□□□ -1.28
USP47-210ENST00000530369 TLL2Q9Y6L7 1015 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms