RNA–Protein interactions for RNA: ENST00000530253.5

CCDC90B-217, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 2

Gene CCDC90B, Length 776 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-217ENST00000530253 NUDT12Q9BQG2 462 aa14.92□□□□□ -0.02
CCDC90B-217ENST00000530253 FDX1P10109 184 aa14.91□□□□□ -0.02
CCDC90B-217ENST00000530253 SENP2Q9HC62 589 aa14.91□□□□□ -0.02
CCDC90B-217ENST00000530253 EIF4G3O43432 1585 aaKnown RBP14.9□□□□□ -0.02
CCDC90B-217ENST00000530253 J3QL48 77 aa14.9□□□□□ -0.02
CCDC90B-217ENST00000530253 ATP13A2Q9NQ11 1180 aa14.89□□□□□ -0.03
CCDC90B-217ENST00000530253 C6orf229H3BNL8 230 aa14.88□□□□□ -0.03
CCDC90B-217ENST00000530253 SYMPKQ92797 1274 aaKnown RBP14.88□□□□□ -0.03
CCDC90B-217ENST00000530253 SSTR3P32745 418 aaPredicted RBP14.87□□□□□ -0.03
CCDC90B-217ENST00000530253 SKOR1P84550 965 aa14.87□□□□□ -0.03
CCDC90B-217ENST00000530253 TTLL12Q14166 644 aaPredicted RBP14.87□□□□□ -0.03
CCDC90B-217ENST00000530253 ABCA5Q8WWZ7 1642 aa14.87□□□□□ -0.03
CCDC90B-217ENST00000530253 MS4A1P11836 297 aa14.86□□□□□ -0.03
CCDC90B-217ENST00000530253 AQRO60306 1485 aaKnown RBP eCLIP14.85□□□□□ -0.03
CCDC90B-217ENST00000530253 KIFC2Q96AC6 838 aa14.85□□□□□ -0.03
CCDC90B-217ENST00000530253 TDRD9Q8NDG6 1382 aaKnown RBP14.85□□□□□ -0.03
CCDC90B-217ENST00000530253 WFS1O76024 890 aa14.84□□□□□ -0.03
CCDC90B-217ENST00000530253 CCNYL3P0C7X3 344 aa14.84□□□□□ -0.03
CCDC90B-217ENST00000530253 BARGINQ6ZT62 677 aa14.84□□□□□ -0.03
CCDC90B-217ENST00000530253 AMHR2Q16671 573 aa14.83□□□□□ -0.04
CCDC90B-217ENST00000530253 LCE2AQ5TA79 106 aaPredicted RBP14.83□□□□□ -0.04
CCDC90B-217ENST00000530253 EHBP1Q8NDI1 1231 aa14.83□□□□□ -0.04
CCDC90B-217ENST00000530253 SPIRE2Q8WWL2 714 aa14.83□□□□□ -0.04
CCDC90B-217ENST00000530253 HPS1Q92902 700 aa14.83□□□□□ -0.04
CCDC90B-217ENST00000530253 TRIM47Q96LD4 638 aa14.83□□□□□ -0.04
CCDC90B-217ENST00000530253 SPDYE5A6NIY4 337 aa14.82□□□□□ -0.04
CCDC90B-217ENST00000530253 ALDH1A1P00352 501 aa14.82□□□□□ -0.04
CCDC90B-217ENST00000530253 PTPRNQ16849 979 aa14.82□□□□□ -0.04
CCDC90B-217ENST00000530253 PCDHGC3Q9UN70 934 aa14.82□□□□□ -0.04
CCDC90B-217ENST00000530253 DIXDC1Q155Q3 683 aa14.8□□□□□ -0.04
CCDC90B-217ENST00000530253 GAPVD1Q14C86 1478 aa14.8□□□□□ -0.04
CCDC90B-217ENST00000530253 ZMYND10O75800 440 aa14.79□□□□□ -0.04
CCDC90B-217ENST00000530253 GRIN2BQ13224 1484 aa14.78□□□□□ -0.04
CCDC90B-217ENST00000530253 PBRM1Q86U86 1689 aa14.77□□□□□ -0.04
CCDC90B-217ENST00000530253 MTMR2Q13614 643 aa14.77□□□□□ -0.05
CCDC90B-217ENST00000530253 DESI1Q6ICB0 168 aa14.77□□□□□ -0.05
CCDC90B-217ENST00000530253 PTCRAQ6ISU1 281 aaPredicted RBP14.77□□□□□ -0.05
CCDC90B-217ENST00000530253 WASF2Q9Y6W5 498 aa14.77□□□□□ -0.05
CCDC90B-217ENST00000530253 GIGYF2Q6Y7W6 1299 aaKnown RBP14.76□□□□□ -0.05
CCDC90B-217ENST00000530253 MOXD2PA6NHM9 499 aa14.75□□□□□ -0.05
CCDC90B-217ENST00000530253 GJA5P36382 358 aa14.75□□□□□ -0.05
CCDC90B-217ENST00000530253 EVA1BQ9NVM1 165 aa14.75□□□□□ -0.05
CCDC90B-217ENST00000530253 SNAPC4Q5SXM2 1469 aa14.75□□□□□ -0.05
CCDC90B-217ENST00000530253 SIAH2O43255 324 aa14.74□□□□□ -0.05
CCDC90B-217ENST00000530253 NFX1Q12986 1120 aaKnown RBP14.74□□□□□ -0.05
CCDC90B-217ENST00000530253 PRR7Q8TB68 274 aa14.74□□□□□ -0.05
CCDC90B-217ENST00000530253 UNC93B1Q9H1C4 597 aa14.74□□□□□ -0.05
CCDC90B-217ENST00000530253 KIF27Q86VH2 1401 aa14.74□□□□□ -0.05
CCDC90B-217ENST00000530253 ERICH3Q5RHP9 1530 aa14.73□□□□□ -0.05
CCDC90B-217ENST00000530253 SNRPBP14678 240 aaKnown RBP14.73□□□□□ -0.05
CCDC90B-217ENST00000530253 NDUFV2P19404 249 aa14.73□□□□□ -0.05
CCDC90B-217ENST00000530253 ZC3H15Q8WU90 426 aaKnown RBP14.73□□□□□ -0.05
CCDC90B-217ENST00000530253 MAGI1Q96QZ7 1491 aaPredicted RBP14.73□□□□□ -0.05
CCDC90B-217ENST00000530253 SH3BP2P78314 561 aa14.72□□□□□ -0.05
CCDC90B-217ENST00000530253 BEGAINQ9BUH8 593 aa14.72□□□□□ -0.05
CCDC90B-217ENST00000530253 RUSC2Q8N2Y8 1516 aa14.71□□□□□ -0.05
CCDC90B-217ENST00000530253 KCNH2Q12809 1159 aa14.71□□□□□ -0.05
CCDC90B-217ENST00000530253 ADAMTS12P58397 1594 aa14.71□□□□□ -0.05
CCDC90B-217ENST00000530253 PLEKHG3A1L390 1219 aa14.69□□□□□ -0.06
CCDC90B-217ENST00000530253 TERTO14746 1132 aaKnown RBP14.69□□□□□ -0.06
CCDC90B-217ENST00000530253 INSM1Q01101 510 aaPredicted RBP14.69□□□□□ -0.06
CCDC90B-217ENST00000530253 CHD1O14646 1710 aa14.69□□□□□ -0.06
CCDC90B-217ENST00000530253 WIPF1O43516 503 aa14.68□□□□□ -0.06
CCDC90B-217ENST00000530253 CAPN5O15484 640 aaPredicted RBP14.67□□□□□ -0.06
CCDC90B-217ENST00000530253 VARSP26640 1264 aaKnown RBP14.67□□□□□ -0.06
CCDC90B-217ENST00000530253 IGF1RP08069 1367 aa14.67□□□□□ -0.06
CCDC90B-217ENST00000530253 SYNJ2O15056 1496 aa14.67□□□□□ -0.06
CCDC90B-217ENST00000530253 ZNF511Q8NB15 262 aa14.66□□□□□ -0.06
CCDC90B-217ENST00000530253 TBC1D2Q9BYX2 928 aa14.66□□□□□ -0.06
CCDC90B-217ENST00000530253 RSBN1LQ6PCB5 846 aaPredicted RBP14.65□□□□□ -0.06
CCDC90B-217ENST00000530253 MPNDQ8N594 471 aa14.65□□□□□ -0.06
CCDC90B-217ENST00000530253 BAP1Q92560 729 aa14.65□□□□□ -0.06
CCDC90B-217ENST00000530253 FHAD1B1AJZ9 1412 aa14.65□□□□□ -0.06
CCDC90B-217ENST00000530253 LINC01559Q495D7 138 aa14.64□□□□□ -0.07
CCDC90B-217ENST00000530253 STK17AQ9UEE5 414 aa14.64□□□□□ -0.07
CCDC90B-217ENST00000530253 CUL7Q14999 1698 aa14.64□□□□□ -0.07
CCDC90B-217ENST00000530253 SLC16A10Q8TF71 515 aa14.63□□□□□ -0.07
CCDC90B-217ENST00000530253 PARP9Q8IXQ6 854 aa14.62□□□□□ -0.07
CCDC90B-217ENST00000530253 ZBTB3Q9H5J0 574 aa14.62□□□□□ -0.07
CCDC90B-217ENST00000530253 EEA1Q15075 1411 aa14.61□□□□□ -0.07
CCDC90B-217ENST00000530253 CTHP32929 405 aa14.61□□□□□ -0.07
CCDC90B-217ENST00000530253 PRPF38BQ5VTL8 546 aaKnown RBP14.6□□□□□ -0.07
CCDC90B-217ENST00000530253 LYPD8Q6UX82 237 aa14.6□□□□□ -0.07
CCDC90B-217ENST00000530253 GRIN2AQ12879 1464 aa14.6□□□□□ -0.07
CCDC90B-217ENST00000530253 RIMBP3CA6NJZ7 1639 aa14.59□□□□□ -0.07
CCDC90B-217ENST00000530253 RIMBP3BA6NNM3 1639 aa14.59□□□□□ -0.07
CCDC90B-217ENST00000530253 RIMBP3Q9UFD9 1639 aa14.59□□□□□ -0.07
CCDC90B-217ENST00000530253 SPTLC1O15269 473 aa14.59□□□□□ -0.07
CCDC90B-217ENST00000530253 AK7Q96M32 723 aa14.59□□□□□ -0.07
CCDC90B-217ENST00000530253 TLL2Q9Y6L7 1015 aa14.59□□□□□ -0.07
CCDC90B-217ENST00000530253 TRIM66O15016 1216 aa14.58□□□□□ -0.08
CCDC90B-217ENST00000530253 BMP1P13497 986 aa14.58□□□□□ -0.08
CCDC90B-217ENST00000530253 NPAS3Q8IXF0 933 aa14.58□□□□□ -0.08
CCDC90B-217ENST00000530253 FAM174AQ8TBP5 190 aa14.58□□□□□ -0.08
CCDC90B-217ENST00000530253 PRXQ9BXM0 1461 aa14.57□□□□□ -0.08
CCDC90B-217ENST00000530253 TRIM46Q7Z4K8 759 aa14.57□□□□□ -0.08
CCDC90B-217ENST00000530253 NXF1Q9UBU9 619 aaKnown RBP14.57□□□□□ -0.08
CCDC90B-217ENST00000530253 CARMIL1Q5VZK9 1371 aa14.57□□□□□ -0.08
CCDC90B-217ENST00000530253 NNTQ13423 1086 aa14.56□□□□□ -0.08
CCDC90B-217ENST00000530253 NUP160Q12769 1436 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms