RNA–Protein interactions for RNA: ENST00000530199.5

SVIP-204, Transcript of small VCP interacting protein, humanhuman

TSL 2

Gene SVIP, Length 549 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVIP-204ENST00000530199 GJA5P36382 358 aa11.76□□□□□ -0.53
SVIP-204ENST00000530199 TMEM259Q4ZIN3 620 aa11.76□□□□□ -0.53
SVIP-204ENST00000530199 RDH13Q8NBN7 331 aa11.75□□□□□ -0.53
SVIP-204ENST00000530199 TOM1O60784 492 aa11.74□□□□□ -0.53
SVIP-204ENST00000530199 PSEN2P49810 448 aa11.74□□□□□ -0.53
SVIP-204ENST00000530199 POM121Q96HA1 1249 aa11.74□□□□□ -0.53
SVIP-204ENST00000530199 ARID3AQ99856 593 aa11.74□□□□□ -0.53
SVIP-204ENST00000530199 SNRKQ9NRH2 765 aa11.74□□□□□ -0.53
SVIP-204ENST00000530199 RGS17Q9UGC6 210 aaPredicted RBP11.74□□□□□ -0.53
SVIP-204ENST00000530199 C9orf84Q5VXU9 1444 aa11.74□□□□□ -0.53
SVIP-204ENST00000530199 TRAPPC8Q9Y2L5 1435 aa11.74□□□□□ -0.53
SVIP-204ENST00000530199 ATP10AO60312 1499 aa11.74□□□□□ -0.53
SVIP-204ENST00000530199 CFAP74Q9C0B2 1584 aa11.74□□□□□ -0.53
SVIP-204ENST00000530199 RAD21O60216 631 aa11.73□□□□□ -0.53
SVIP-204ENST00000530199 NDUFV2P19404 249 aa11.73□□□□□ -0.53
SVIP-204ENST00000530199 HECW1Q76N89 1606 aa11.73□□□□□ -0.53
SVIP-204ENST00000530199 PROSER2Q86WR7 435 aaPredicted RBP11.73□□□□□ -0.53
SVIP-204ENST00000530199 RAPGEF2Q9Y4G8 1499 aa11.72□□□□□ -0.53
SVIP-204ENST00000530199 ARHGAP33O14559 1287 aa11.72□□□□□ -0.53
SVIP-204ENST00000530199 KDM4AO75164 1064 aa11.72□□□□□ -0.53
SVIP-204ENST00000530199 CSPP1Q1MSJ5 1256 aa11.72□□□□□ -0.53
SVIP-204ENST00000530199 RABGEF1Q9UJ41 708 aa11.72□□□□□ -0.53
SVIP-204ENST00000530199 CAMSAP1Q5T5Y3 1602 aa11.71□□□□□ -0.53
SVIP-204ENST00000530199 LILRB3O75022 631 aa11.71□□□□□ -0.53
SVIP-204ENST00000530199 PIP4K2BP78356 416 aa11.71□□□□□ -0.53
SVIP-204ENST00000530199 QPCTQ16769 361 aa11.71□□□□□ -0.53
SVIP-204ENST00000530199 RSPH4AQ5TD94 716 aa11.71□□□□□ -0.53
SVIP-204ENST00000530199 FNBP4Q8N3X1 1017 aaPredicted RBP11.71□□□□□ -0.53
SVIP-204ENST00000530199 SLC4A5Q9BY07 1137 aa11.71□□□□□ -0.53
SVIP-204ENST00000530199 PCDHB15Q9Y5E8 787 aa11.71□□□□□ -0.53
SVIP-204ENST00000530199 ERBB3P21860 1342 aa11.7□□□□□ -0.54
SVIP-204ENST00000530199 GCGRP47871 477 aa11.7□□□□□ -0.54
SVIP-204ENST00000530199 VARS2Q5ST30 1063 aaKnown RBP11.7□□□□□ -0.54
SVIP-204ENST00000530199 POTEEQ6S8J3 1075 aa11.7□□□□□ -0.54
SVIP-204ENST00000530199 COG6Q9Y2V7 657 aa11.7□□□□□ -0.54
SVIP-204ENST00000530199 C3P01024 1663 aa11.7□□□□□ -0.54
SVIP-204ENST00000530199 SRCAPQ6ZRS2 3230 aa11.69□□□□□ -0.54
SVIP-204ENST00000530199 USP46P62068 366 aa11.69□□□□□ -0.54
SVIP-204ENST00000530199 SWT1Q5T5J6 900 aaKnown RBP11.69□□□□□ -0.54
SVIP-204ENST00000530199 PLA2R1Q13018 1463 aa11.68□□□□□ -0.54
SVIP-204ENST00000530199 SLC10A3P09131 477 aa11.67□□□□□ -0.54
SVIP-204ENST00000530199 DMRTA1Q5VZB9 504 aa11.67□□□□□ -0.54
SVIP-204ENST00000530199 MTMR14Q8NCE2 650 aa11.67□□□□□ -0.54
SVIP-204ENST00000530199 SEPT9Q9UHD8 586 aaPredicted RBP11.67□□□□□ -0.54
SVIP-204ENST00000530199 HOXA2O43364 376 aa11.66□□□□□ -0.54
SVIP-204ENST00000530199 RTL5Q5HYW3 569 aaPredicted RBP11.66□□□□□ -0.54
SVIP-204ENST00000530199 PRPF38BQ5VTL8 546 aaKnown RBP11.66□□□□□ -0.54
SVIP-204ENST00000530199 TCOF1Q13428 1488 aaKnown RBP11.65□□□□□ -0.54
SVIP-204ENST00000530199 FAM9AQ8IZU1 332 aaPredicted RBP11.65□□□□□ -0.54
SVIP-204ENST00000530199 CCDC82Q8N4S0 544 aa11.65□□□□□ -0.54
SVIP-204ENST00000530199 ZNF777Q9ULD5 760 aaPredicted RBP11.65□□□□□ -0.54
SVIP-204ENST00000530199 AXIN2Q9Y2T1 843 aa11.65□□□□□ -0.54
SVIP-204ENST00000530199 CPS1P31327 1500 aa11.65□□□□□ -0.55
SVIP-204ENST00000530199 NPATQ14207 1427 aa11.64□□□□□ -0.55
SVIP-204ENST00000530199 PTPRKQ15262 1439 aa11.64□□□□□ -0.55
SVIP-204ENST00000530199 NUTM2BA6NNL0 878 aaPredicted RBP11.64□□□□□ -0.55
SVIP-204ENST00000530199 NUTM2EB1AL46 878 aaPredicted RBP11.64□□□□□ -0.55
SVIP-204ENST00000530199 PBX2P40425 430 aa11.64□□□□□ -0.55
SVIP-204ENST00000530199 FAM98CQ17RN3 349 aaKnown RBP11.64□□□□□ -0.55
SVIP-204ENST00000530199 NUTM2DQ5VT03 806 aaPredicted RBP11.64□□□□□ -0.55
SVIP-204ENST00000530199 NUTM2AQ8IVF1 878 aaPredicted RBP11.64□□□□□ -0.55
SVIP-204ENST00000530199 CABLES1Q8TDN4 633 aa11.64□□□□□ -0.55
SVIP-204ENST00000530199 ALKQ9UM73 1620 aa11.64□□□□□ -0.55
SVIP-204ENST00000530199 CTTNBP2Q8WZ74 1663 aa11.63□□□□□ -0.55
SVIP-204ENST00000530199 AP1G2O75843 785 aa11.63□□□□□ -0.55
SVIP-204ENST00000530199 FDX1P10109 184 aa11.63□□□□□ -0.55
SVIP-204ENST00000530199 HDGFP51858 240 aaKnown RBP11.63□□□□□ -0.55
SVIP-204ENST00000530199 ZBTB3Q9H5J0 574 aa11.63□□□□□ -0.55
SVIP-204ENST00000530199 VPS9D1Q9Y2B5 631 aa11.63□□□□□ -0.55
SVIP-204ENST00000530199 REREQ9P2R6 1566 aa11.62□□□□□ -0.55
SVIP-204ENST00000530199 SCAPERQ9BY12 1400 aa11.62□□□□□ -0.55
SVIP-204ENST00000530199 AGLP35573 1532 aa11.62□□□□□ -0.55
SVIP-204ENST00000530199 HRCP23327 699 aa11.62□□□□□ -0.55
SVIP-204ENST00000530199 ST18O60284 1047 aa11.61□□□□□ -0.55
SVIP-204ENST00000530199 POTEAQ6S8J7 498 aa11.61□□□□□ -0.55
SVIP-204ENST00000530199 PCDHGC3Q9UN70 934 aa11.61□□□□□ -0.55
SVIP-204ENST00000530199 CNTLNQ9NXG0 1405 aa11.6□□□□□ -0.55
SVIP-204ENST00000530199 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.6□□□□□ -0.55
SVIP-204ENST00000530199 SLC4A3P48751 1232 aa11.6□□□□□ -0.55
SVIP-204ENST00000530199 EMP3P54852 163 aa11.6□□□□□ -0.55
SVIP-204ENST00000530199 GUCA2AQ02747 115 aa11.59□□□□□ -0.55
SVIP-204ENST00000530199 LHX8Q68G74 356 aa11.59□□□□□ -0.55
SVIP-204ENST00000530199 LAPTM4BQ86VI4 370 aa11.59□□□□□ -0.55
SVIP-204ENST00000530199 SLF2Q8IX21 1173 aa11.59□□□□□ -0.55
SVIP-204ENST00000530199 ZNF687Q8N1G0 1237 aa11.59□□□□□ -0.55
SVIP-204ENST00000530199 HLA-CQ95604 372 aa11.59□□□□□ -0.55
SVIP-204ENST00000530199 GDPD2Q9HCC8 539 aa11.59□□□□□ -0.55
SVIP-204ENST00000530199 USP17L8P0C7I0 530 aa11.58□□□□□ -0.56
SVIP-204ENST00000530199 SAMD7Q7Z3H4 446 aa11.58□□□□□ -0.56
SVIP-204ENST00000530199 ZNF330Q9Y3S2 320 aaPredicted RBP11.58□□□□□ -0.56
SVIP-204ENST00000530199 ZNF142P52746 1687 aaPredicted RBP11.58□□□□□ -0.56
SVIP-204ENST00000530199 SHANK2Q9UPX8 1470 aa11.57□□□□□ -0.56
SVIP-204ENST00000530199 RAPGEF6Q8TEU7 1601 aa11.57□□□□□ -0.56
SVIP-204ENST00000530199 MARVELD3Q96A59 401 aa11.57□□□□□ -0.56
SVIP-204ENST00000530199 ESF1Q9H501 851 aaKnown RBP11.57□□□□□ -0.56
SVIP-204ENST00000530199 PRM3Q9NNZ6 103 aa11.57□□□□□ -0.56
SVIP-204ENST00000530199 PLEKHD1A6NEE1 506 aa11.56□□□□□ -0.56
SVIP-204ENST00000530199 NBPF3Q9H094 633 aa11.56□□□□□ -0.56
SVIP-204ENST00000530199 PLCH2O75038 1416 aa11.55□□□□□ -0.56
SVIP-204ENST00000530199 BHMG1C9JSJ3 638 aaPredicted RBP11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms