RNA–Protein interactions for RNA: ENST00000529994.1

SF3B2-208, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 2

Gene SF3B2, Length 1,004 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-208ENST00000529994 TNS1Q9HBL0 1735 aaKnown RBP16.8■□□□□ 0.28
SF3B2-208ENST00000529994 TRAK1Q9UPV9 953 aa16.8■□□□□ 0.28
SF3B2-208ENST00000529994 PRR36Q9H6K5 1346 aa16.79■□□□□ 0.28
SF3B2-208ENST00000529994 PAK3O75914 559 aaPredicted RBP16.79■□□□□ 0.28
SF3B2-208ENST00000529994 EZH2Q15910 746 aaKnown RBP16.79■□□□□ 0.28
SF3B2-208ENST00000529994 DLC1Q96QB1 1528 aa16.79■□□□□ 0.28
SF3B2-208ENST00000529994 ACIN1Q9UKV3 1341 aaKnown RBP16.78■□□□□ 0.28
SF3B2-208ENST00000529994 ADGRB2O60241 1585 aa16.78■□□□□ 0.28
SF3B2-208ENST00000529994 THSD7AQ9UPZ6 1657 aa16.78■□□□□ 0.28
SF3B2-208ENST00000529994 CRYBG1Q9Y4K1 1723 aa16.77■□□□□ 0.28
SF3B2-208ENST00000529994 PRDM11Q9NQV5 511 aa16.77■□□□□ 0.28
SF3B2-208ENST00000529994 TRIM37O94972 964 aa16.76■□□□□ 0.27
SF3B2-208ENST00000529994 NGDNQ8NEJ9 315 aaKnown RBP16.76■□□□□ 0.27
SF3B2-208ENST00000529994 CHRNA2Q15822 529 aa16.75■□□□□ 0.27
SF3B2-208ENST00000529994 STRN4Q9NRL3 753 aa16.75■□□□□ 0.27
SF3B2-208ENST00000529994 ADGRB1O14514 1584 aa16.75■□□□□ 0.27
SF3B2-208ENST00000529994 DISP2A7MBM2 1401 aa16.74■□□□□ 0.27
SF3B2-208ENST00000529994 TULP4Q9NRJ4 1543 aa16.74■□□□□ 0.27
SF3B2-208ENST00000529994 WASLO00401 505 aaPredicted RBP16.73■□□□□ 0.27
SF3B2-208ENST00000529994 CAMKK2Q96RR4 588 aa16.73■□□□□ 0.27
SF3B2-208ENST00000529994 USP35Q9P2H5 1018 aa16.73■□□□□ 0.27
SF3B2-208ENST00000529994 KDM2AQ9Y2K7 1162 aa16.73■□□□□ 0.27
SF3B2-208ENST00000529994 KIAA0232Q92628 1395 aa16.73■□□□□ 0.27
SF3B2-208ENST00000529994 SPATA31A1Q5TZJ5 1347 aa16.72■□□□□ 0.27
SF3B2-208ENST00000529994 APBA3O96018 575 aa16.72■□□□□ 0.27
SF3B2-208ENST00000529994 ZC3H6P61129 1189 aaKnown RBP16.72■□□□□ 0.27
SF3B2-208ENST00000529994 NUTM2GQ5VZR2 741 aa16.72■□□□□ 0.27
SF3B2-208ENST00000529994 EIF3AQ14152 1382 aaKnown RBP16.72■□□□□ 0.27
SF3B2-208ENST00000529994 FAM196AQ6ZSG2 479 aa16.71■□□□□ 0.27
SF3B2-208ENST00000529994 PHRF1Q9P1Y6 1649 aaKnown RBP16.7■□□□□ 0.26
SF3B2-208ENST00000529994 ITSN1Q15811 1721 aa16.68■□□□□ 0.26
SF3B2-208ENST00000529994 DCAF11Q8TEB1 546 aa16.68■□□□□ 0.26
SF3B2-208ENST00000529994 EVA1CP58658 441 aa16.67■□□□□ 0.26
SF3B2-208ENST00000529994 PDE3BQ13370 1112 aa16.66■□□□□ 0.26
SF3B2-208ENST00000529994 NUP188Q5SRE5 1749 aa16.66■□□□□ 0.26
SF3B2-208ENST00000529994 NUDT16Q96DE0 195 aaKnown RBP16.66■□□□□ 0.26
SF3B2-208ENST00000529994 ATP7BP35670 1465 aa16.66■□□□□ 0.26
SF3B2-208ENST00000529994 RREB1Q92766 1687 aa16.65■□□□□ 0.26
SF3B2-208ENST00000529994 ARHGEF28Q8N1W1 1705 aaKnown RBP16.65■□□□□ 0.26
SF3B2-208ENST00000529994 YY1P25490 414 aa16.65■□□□□ 0.26
SF3B2-208ENST00000529994 LARP1Q6PKG0 1096 aaKnown RBP16.64■□□□□ 0.25
SF3B2-208ENST00000529994 PARD3Q8TEW0 1356 aa16.64■□□□□ 0.25
SF3B2-208ENST00000529994 SSH2Q76I76 1423 aa16.63■□□□□ 0.25
SF3B2-208ENST00000529994 CAMTA1Q9Y6Y1 1673 aa16.62■□□□□ 0.25
SF3B2-208ENST00000529994 NBPF8Q3BBV2 869 aa16.62■□□□□ 0.25
SF3B2-208ENST00000529994 NBPF14Q5TI25 921 aa16.62■□□□□ 0.25
SF3B2-208ENST00000529994 BARGINQ6ZT62 677 aa16.62■□□□□ 0.25
SF3B2-208ENST00000529994 CDK19Q9BWU1 502 aa16.62■□□□□ 0.25
SF3B2-208ENST00000529994 RAB3GAP2Q9H2M9 1393 aa16.61■□□□□ 0.25
SF3B2-208ENST00000529994 NRKQ7Z2Y5 1582 aa16.6■□□□□ 0.25
SF3B2-208ENST00000529994 TCP11L2Q8N4U5 519 aa16.6■□□□□ 0.25
SF3B2-208ENST00000529994 PPP1R1BQ9UD71 204 aaPredicted RBP16.6■□□□□ 0.25
SF3B2-208ENST00000529994 ACEP12821 1306 aa16.6■□□□□ 0.25
SF3B2-208ENST00000529994 ABTB2Q8N961 1025 aa16.59■□□□□ 0.25
SF3B2-208ENST00000529994 TOPAZ1Q8N9V7 1692 aa16.59■□□□□ 0.25
SF3B2-208ENST00000529994 LMO7Q8WWI1 1683 aa16.58■□□□□ 0.24
SF3B2-208ENST00000529994 POLR3AO14802 1390 aaPredicted RBP16.57■□□□□ 0.24
SF3B2-208ENST00000529994 ZBTB7CA1YPR0 619 aa16.57■□□□□ 0.24
SF3B2-208ENST00000529994 SPON1Q9HCB6 807 aa16.57■□□□□ 0.24
SF3B2-208ENST00000529994 KCNQ2O43526 872 aa16.56■□□□□ 0.24
SF3B2-208ENST00000529994 CCDC61Q9Y6R9 512 aa16.56■□□□□ 0.24
SF3B2-208ENST00000529994 PARP4Q9UKK3 1724 aaKnown RBP16.55■□□□□ 0.24
SF3B2-208ENST00000529994 CPDO75976 1380 aa16.54■□□□□ 0.24
SF3B2-208ENST00000529994 PLEKHG3A1L390 1219 aa16.54■□□□□ 0.24
SF3B2-208ENST00000529994 GCP02774 474 aa16.54■□□□□ 0.24
SF3B2-208ENST00000529994 USP19O94966 1318 aa16.53■□□□□ 0.24
SF3B2-208ENST00000529994 THRAP3Q9Y2W1 955 aaKnown RBP16.53■□□□□ 0.24
SF3B2-208ENST00000529994 SBF2Q86WG5 1849 aa16.53■□□□□ 0.24
SF3B2-208ENST00000529994 COL5A2P05997 1499 aaPredicted RBP16.53■□□□□ 0.24
SF3B2-208ENST00000529994 DCAF8L1A6NGE4 600 aa16.52■□□□□ 0.24
SF3B2-208ENST00000529994 NLRP13Q86W25 1043 aa16.52■□□□□ 0.24
SF3B2-208ENST00000529994 STAC3Q96MF2 364 aa16.52■□□□□ 0.24
SF3B2-208ENST00000529994 PEAK1Q9H792 1746 aa16.51■□□□□ 0.23
SF3B2-208ENST00000529994 PTF1AQ7RTS3 328 aa16.51■□□□□ 0.23
SF3B2-208ENST00000529994 ANO8Q9HCE9 1232 aaPredicted RBP16.51■□□□□ 0.23
SF3B2-208ENST00000529994 NINLQ9Y2I6 1382 aa16.51■□□□□ 0.23
SF3B2-208ENST00000529994 LRRC37A3O60309 1634 aa16.5■□□□□ 0.23
SF3B2-208ENST00000529994 SRPK2P78362 688 aaKnown RBP16.5■□□□□ 0.23
SF3B2-208ENST00000529994 PDGFDQ9GZP0 370 aaPredicted RBP16.5■□□□□ 0.23
SF3B2-208ENST00000529994 OVOS2A0A0G2JMS6 1433 aa16.5■□□□□ 0.23
SF3B2-208ENST00000529994 OVOS2A0A0J9YW53 1432 aa16.5■□□□□ 0.23
SF3B2-208ENST00000529994 CRB1P82279 1406 aa16.5■□□□□ 0.23
SF3B2-208ENST00000529994 OVOS2Q6IE36 1432 aa16.5■□□□□ 0.23
SF3B2-208ENST00000529994 PPIP5K1Q6PFW1 1433 aa16.5■□□□□ 0.23
SF3B2-208ENST00000529994 CABP2Q9NPB3 220 aa16.49■□□□□ 0.23
SF3B2-208ENST00000529994 NBPF1Q3BBV0 1214 aa16.48■□□□□ 0.23
SF3B2-208ENST00000529994 CASZ1Q86V15 1759 aa16.48■□□□□ 0.23
SF3B2-208ENST00000529994 RGPD3A6NKT7 1758 aaPredicted RBP16.47■□□□□ 0.23
SF3B2-208ENST00000529994 RGPD4Q7Z3J3 1758 aa16.47■□□□□ 0.23
SF3B2-208ENST00000529994 PLSCR1O15162 318 aa16.47■□□□□ 0.23
SF3B2-208ENST00000529994 ZBTB7AO95365 584 aa16.47■□□□□ 0.23
SF3B2-208ENST00000529994 NLRP6P59044 892 aa16.47■□□□□ 0.23
SF3B2-208ENST00000529994 DDB1Q16531 1140 aa16.47■□□□□ 0.23
SF3B2-208ENST00000529994 TOM1L2Q6ZVM7 507 aa16.47■□□□□ 0.23
SF3B2-208ENST00000529994 BCL11BQ9C0K0 894 aaPredicted RBP16.47■□□□□ 0.23
SF3B2-208ENST00000529994 C11orf95C9JLR9 678 aaPredicted RBP16.46■□□□□ 0.23
SF3B2-208ENST00000529994 WNK3Q9BYP7 1800 aa16.45■□□□□ 0.22
SF3B2-208ENST00000529994 KIAA1210Q9ULL0 1709 aa16.45■□□□□ 0.22
SF3B2-208ENST00000529994 AKAP12Q02952 1782 aa16.44■□□□□ 0.22
SF3B2-208ENST00000529994 MYOM1P52179 1685 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms