RNA–Protein interactions for RNA: ENST00000529963.1

AMBRA1-209, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 1 (best)

Gene AMBRA1, Length 1,529 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-209ENST00000529963 PPEF1O14829 653 aaPredicted RBP9.31□□□□□ -0.92
AMBRA1-209ENST00000529963 LYPD8Q6UX82 237 aa9.31□□□□□ -0.92
AMBRA1-209ENST00000529963 CLUAP1Q96AJ1 413 aa9.31□□□□□ -0.92
AMBRA1-209ENST00000529963 POM121Q96HA1 1249 aa9.31□□□□□ -0.92
AMBRA1-209ENST00000529963 DXOO77932 396 aaKnown RBP9.31□□□□□ -0.92
AMBRA1-209ENST00000529963 DESI1Q6ICB0 168 aa9.31□□□□□ -0.92
AMBRA1-209ENST00000529963 UBTFP17480 764 aaKnown RBP9.3□□□□□ -0.92
AMBRA1-209ENST00000529963 NR6A1Q15406 480 aa9.3□□□□□ -0.92
AMBRA1-209ENST00000529963 MAP10Q9P2G4 905 aa9.3□□□□□ -0.92
AMBRA1-209ENST00000529963 MMP16P51512 607 aa9.29□□□□□ -0.92
AMBRA1-209ENST00000529963 CCDC24Q8N4L8 307 aa9.29□□□□□ -0.92
AMBRA1-209ENST00000529963 GJD4Q96KN9 370 aaPredicted RBP9.29□□□□□ -0.92
AMBRA1-209ENST00000529963 ARHGEF11O15085 1522 aa9.28□□□□□ -0.92
AMBRA1-209ENST00000529963 NUDT12Q9BQG2 462 aa9.28□□□□□ -0.92
AMBRA1-209ENST00000529963 TRIM34Q9BYJ4 488 aa9.28□□□□□ -0.92
AMBRA1-209ENST00000529963 CTHP32929 405 aa9.27□□□□□ -0.93
AMBRA1-209ENST00000529963 PTPRNQ16849 979 aa9.27□□□□□ -0.93
AMBRA1-209ENST00000529963 GDPD2Q9HCC8 539 aa9.27□□□□□ -0.93
AMBRA1-209ENST00000529963 TBC1D2BQ9UPU7 963 aa9.26□□□□□ -0.93
AMBRA1-209ENST00000529963 FCF1Q9Y324 198 aaKnown RBP9.26□□□□□ -0.93
AMBRA1-209ENST00000529963 URB2Q14146 1524 aaKnown RBP9.26□□□□□ -0.93
AMBRA1-209ENST00000529963 PLSCR2Q9NRY7 297 aa9.26□□□□□ -0.93
AMBRA1-209ENST00000529963 COG6Q9Y2V7 657 aa9.26□□□□□ -0.93
AMBRA1-209ENST00000529963 F12P00748 615 aaPredicted RBP9.25□□□□□ -0.93
AMBRA1-209ENST00000529963 CCNYL3P0C7X3 344 aa9.25□□□□□ -0.93
AMBRA1-209ENST00000529963 PTCRAQ6ISU1 281 aaPredicted RBP9.25□□□□□ -0.93
AMBRA1-209ENST00000529963 PPP1R18Q6NYC8 613 aa9.25□□□□□ -0.93
AMBRA1-209ENST00000529963 RNF223E7ERA6 249 aa9.24□□□□□ -0.93
AMBRA1-209ENST00000529963 CYB5RLQ6IPT4 315 aa9.24□□□□□ -0.93
AMBRA1-209ENST00000529963 ZMYND15Q9H091 742 aa9.24□□□□□ -0.93
AMBRA1-209ENST00000529963 EVA1BQ9NVM1 165 aa9.24□□□□□ -0.93
AMBRA1-209ENST00000529963 ABL2P42684 1182 aa9.23□□□□□ -0.93
AMBRA1-209ENST00000529963 PLA2G2EQ9NZK7 142 aa9.23□□□□□ -0.93
AMBRA1-209ENST00000529963 KCNH2Q12809 1159 aa9.22□□□□□ -0.93
AMBRA1-209ENST00000529963 RAD21O60216 631 aa9.21□□□□□ -0.93
AMBRA1-209ENST00000529963 PLA2G2CQ5R387 149 aa9.21□□□□□ -0.93
AMBRA1-209ENST00000529963 NDUFB9Q9Y6M9 179 aa9.21□□□□□ -0.93
AMBRA1-209ENST00000529963 CCDC88BA6NC98 1476 aa9.21□□□□□ -0.94
AMBRA1-209ENST00000529963 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.21□□□□□ -0.94
AMBRA1-209ENST00000529963 PRDM2Q13029 1718 aa9.2□□□□□ -0.94
AMBRA1-209ENST00000529963 GPR37L1O60883 481 aa9.2□□□□□ -0.94
AMBRA1-209ENST00000529963 UNC93B1Q9H1C4 597 aa9.2□□□□□ -0.94
AMBRA1-209ENST00000529963 IFT140Q96RY7 1462 aa9.19□□□□□ -0.94
AMBRA1-209ENST00000529963 APBB1O00213 710 aa9.19□□□□□ -0.94
AMBRA1-209ENST00000529963 GGCXP38435 758 aa9.19□□□□□ -0.94
AMBRA1-209ENST00000529963 SUPT5HO00267 1087 aaKnown RBP9.18□□□□□ -0.94
AMBRA1-209ENST00000529963 SOCS7O14512 581 aa9.18□□□□□ -0.94
AMBRA1-209ENST00000529963 ERICH6Q7L0X2 663 aa9.18□□□□□ -0.94
AMBRA1-209ENST00000529963 IRF5Q13568 498 aa9.17□□□□□ -0.94
AMBRA1-209ENST00000529963 PROSER2Q86WR7 435 aaPredicted RBP9.17□□□□□ -0.94
AMBRA1-209ENST00000529963 PRM3Q9NNZ6 103 aa9.17□□□□□ -0.94
AMBRA1-209ENST00000529963 FKBPLQ9UIM3 349 aa9.17□□□□□ -0.94
AMBRA1-209ENST00000529963 ABCC8Q09428 1581 aa9.16□□□□□ -0.94
AMBRA1-209ENST00000529963 TOPBP1Q92547 1522 aa9.16□□□□□ -0.94
AMBRA1-209ENST00000529963 A6NJR5 290 aa9.16□□□□□ -0.94
AMBRA1-209ENST00000529963 LINC01559Q495D7 138 aa9.16□□□□□ -0.94
AMBRA1-209ENST00000529963 ANKLE1Q8NAG6 615 aa9.16□□□□□ -0.94
AMBRA1-209ENST00000529963 ZNF608Q9ULD9 1512 aaPredicted RBP9.16□□□□□ -0.94
AMBRA1-209ENST00000529963 BAP1Q92560 729 aa9.15□□□□□ -0.94
AMBRA1-209ENST00000529963 FNBP4Q8N3X1 1017 aaPredicted RBP9.15□□□□□ -0.95
AMBRA1-209ENST00000529963 ARID3CA6NKF2 412 aa9.14□□□□□ -0.95
AMBRA1-209ENST00000529963 VAC14Q08AM6 782 aa9.14□□□□□ -0.95
AMBRA1-209ENST00000529963 EMID1Q96A84 441 aaPredicted RBP9.14□□□□□ -0.95
AMBRA1-209ENST00000529963 ZBTB24O43167 697 aaPredicted RBP9.13□□□□□ -0.95
AMBRA1-209ENST00000529963 TRAK2O60296 914 aa9.13□□□□□ -0.95
AMBRA1-209ENST00000529963 IFFO2Q5TF58 517 aa9.13□□□□□ -0.95
AMBRA1-209ENST00000529963 ZNF777Q9ULD5 760 aaPredicted RBP9.13□□□□□ -0.95
AMBRA1-209ENST00000529963 ARAP1Q96P48 1450 aa9.13□□□□□ -0.95
AMBRA1-209ENST00000529963 DNMBPQ6XZF7 1577 aa9.12□□□□□ -0.95
AMBRA1-209ENST00000529963 POM121CA8CG34 1229 aa9.12□□□□□ -0.95
AMBRA1-209ENST00000529963 LIAT1Q6ZQX7 453 aa9.12□□□□□ -0.95
AMBRA1-209ENST00000529963 ZNF330Q9Y3S2 320 aaPredicted RBP9.12□□□□□ -0.95
AMBRA1-209ENST00000529963 A0A0G2JS52 829 aa9.11□□□□□ -0.95
AMBRA1-209ENST00000529963 FBXO45P0C2W1 286 aa9.1□□□□□ -0.95
AMBRA1-209ENST00000529963 TRIM32Q13049 653 aa9.1□□□□□ -0.95
AMBRA1-209ENST00000529963 PNMA1Q8ND90 353 aa9.1□□□□□ -0.95
AMBRA1-209ENST00000529963 FOXJ1Q92949 421 aa9.1□□□□□ -0.95
AMBRA1-209ENST00000529963 EIF4G3O43432 1585 aaKnown RBP9.1□□□□□ -0.95
AMBRA1-209ENST00000529963 SH3BP2P78314 561 aa9.1□□□□□ -0.95
AMBRA1-209ENST00000529963 ZNF511Q8NB15 262 aa9.1□□□□□ -0.95
AMBRA1-209ENST00000529963 ARMC2Q8NEN0 867 aa9.1□□□□□ -0.95
AMBRA1-209ENST00000529963 OCSTAMPQ9BR26 566 aa9.1□□□□□ -0.95
AMBRA1-209ENST00000529963 CARD14Q9BXL6 1004 aa9.1□□□□□ -0.95
AMBRA1-209ENST00000529963 MAGEB6P1A0A0J9YX57 407 aa9.09□□□□□ -0.95
AMBRA1-209ENST00000529963 AGERQ15109 404 aa9.09□□□□□ -0.95
AMBRA1-209ENST00000529963 NBPF14Q5TI25 921 aa9.09□□□□□ -0.95
AMBRA1-209ENST00000529963 SKOR1P84550 965 aa9.08□□□□□ -0.96
AMBRA1-209ENST00000529963 ZBBXA8MT70 800 aa9.07□□□□□ -0.96
AMBRA1-209ENST00000529963 SLC19A1P41440 591 aa9.07□□□□□ -0.96
AMBRA1-209ENST00000529963 C4orf48Q5BLP8 95 aa9.07□□□□□ -0.96
AMBRA1-209ENST00000529963 PDXDC2PQ6P474 469 aa9.07□□□□□ -0.96
AMBRA1-209ENST00000529963 WWC1Q8IX03 1113 aa9.07□□□□□ -0.96
AMBRA1-209ENST00000529963 AQRO60306 1485 aaKnown RBP eCLIP9.07□□□□□ -0.96
AMBRA1-209ENST00000529963 PTK2Q05397 1052 aa9.06□□□□□ -0.96
AMBRA1-209ENST00000529963 SH3BP5LQ7L8J4 393 aa9.06□□□□□ -0.96
AMBRA1-209ENST00000529963 ARHGAP9Q9BRR9 750 aa9.06□□□□□ -0.96
AMBRA1-209ENST00000529963 C1orf115Q9H7X2 142 aa9.06□□□□□ -0.96
AMBRA1-209ENST00000529963 POLA1P09884 1462 aaPredicted RBP9.06□□□□□ -0.96
AMBRA1-209ENST00000529963 TARBP1Q13395 1621 aaKnown RBP9.06□□□□□ -0.96
AMBRA1-209ENST00000529963 ZC3H4Q9UPT8 1303 aaKnown RBP9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 8 ms