RNA–Protein interactions for RNA: ENST00000529921.1

LRP4-204, Transcript of LDL receptor related protein 4, humanhuman

TSL 4

Gene LRP4, Length 590 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP4-204ENST00000529921 CABP1Q9NZU7 370 aa16.58■□□□□ 0.24
LRP4-204ENST00000529921 POLR3AO14802 1390 aaPredicted RBP16.57■□□□□ 0.24
LRP4-204ENST00000529921 FNBP4Q8N3X1 1017 aaPredicted RBP16.55■□□□□ 0.24
LRP4-204ENST00000529921 TRPC5Q9UL62 973 aaPredicted RBP16.55■□□□□ 0.24
LRP4-204ENST00000529921 RBM6P78332 1123 aaKnown RBP16.54■□□□□ 0.24
LRP4-204ENST00000529921 ABTB2Q8N961 1025 aa16.54■□□□□ 0.24
LRP4-204ENST00000529921 TIMELESSQ9UNS1 1208 aa16.54■□□□□ 0.24
LRP4-204ENST00000529921 ATAD2Q6PL18 1390 aa16.53■□□□□ 0.24
LRP4-204ENST00000529921 PLCH1Q4KWH8 1693 aa16.53■□□□□ 0.24
LRP4-204ENST00000529921 SBNO2Q9Y2G9 1366 aa16.52■□□□□ 0.24
LRP4-204ENST00000529921 ST20-MTHFSA0A0A6YYL1 179 aa16.52■□□□□ 0.24
LRP4-204ENST00000529921 TMC1Q8TDI8 760 aa16.52■□□□□ 0.24
LRP4-204ENST00000529921 AKAP12Q02952 1782 aa16.51■□□□□ 0.23
LRP4-204ENST00000529921 CRYBG1Q9Y4K1 1723 aa16.51■□□□□ 0.23
LRP4-204ENST00000529921 BCL9LQ86UU0 1499 aa16.51■□□□□ 0.23
LRP4-204ENST00000529921 UNC5CLQ8IV45 518 aa16.51■□□□□ 0.23
LRP4-204ENST00000529921 CCDC9Q9Y3X0 531 aaKnown RBP16.51■□□□□ 0.23
LRP4-204ENST00000529921 PHRF1Q9P1Y6 1649 aaKnown RBP16.51■□□□□ 0.23
LRP4-204ENST00000529921 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.5■□□□□ 0.23
LRP4-204ENST00000529921 ATRNO75882 1429 aa16.5■□□□□ 0.23
LRP4-204ENST00000529921 NWD2Q9ULI1 1742 aa16.5■□□□□ 0.23
LRP4-204ENST00000529921 USP47Q96K76 1375 aa16.5■□□□□ 0.23
LRP4-204ENST00000529921 SLIT2O94813 1529 aa16.5■□□□□ 0.23
LRP4-204ENST00000529921 FAM83GA6ND36 823 aa16.49■□□□□ 0.23
LRP4-204ENST00000529921 USP6P35125 1406 aa16.49■□□□□ 0.23
LRP4-204ENST00000529921 PRDM11Q9NQV5 511 aa16.49■□□□□ 0.23
LRP4-204ENST00000529921 COL14A1Q05707 1796 aaKnown RBP16.49■□□□□ 0.23
LRP4-204ENST00000529921 ZC3H6P61129 1189 aaKnown RBP16.48■□□□□ 0.23
LRP4-204ENST00000529921 NLRP13Q86W25 1043 aa16.48■□□□□ 0.23
LRP4-204ENST00000529921 ZNF692Q9BU19 519 aaPredicted RBP16.48■□□□□ 0.23
LRP4-204ENST00000529921 CDK12Q9NYV4 1490 aaPredicted RBP16.48■□□□□ 0.23
LRP4-204ENST00000529921 RGS12O14924 1447 aa16.47■□□□□ 0.23
LRP4-204ENST00000529921 ZBTB7CA1YPR0 619 aa16.47■□□□□ 0.23
LRP4-204ENST00000529921 NLRP6P59044 892 aa16.47■□□□□ 0.23
LRP4-204ENST00000529921 BTG4Q9NY30 223 aa16.47■□□□□ 0.23
LRP4-204ENST00000529921 BRD4O60885 1362 aaPredicted RBP16.47■□□□□ 0.23
LRP4-204ENST00000529921 KTN1Q86UP2 1357 aaKnown RBP16.47■□□□□ 0.23
LRP4-204ENST00000529921 CHRNA2Q15822 529 aa16.46■□□□□ 0.23
LRP4-204ENST00000529921 GJD4Q96KN9 370 aaPredicted RBP16.46■□□□□ 0.23
LRP4-204ENST00000529921 HDGFL2Q7Z4V5 671 aaPredicted RBP16.45■□□□□ 0.22
LRP4-204ENST00000529921 TESK2Q96S53 571 aa16.45■□□□□ 0.22
LRP4-204ENST00000529921 KIAA0232Q92628 1395 aa16.45■□□□□ 0.22
LRP4-204ENST00000529921 MON2Q7Z3U7 1717 aa16.45■□□□□ 0.22
LRP4-204ENST00000529921 PIK3C2AO00443 1686 aa16.44■□□□□ 0.22
LRP4-204ENST00000529921 SLC24A1O60721 1099 aa16.44■□□□□ 0.22
LRP4-204ENST00000529921 TMF1P82094 1093 aa16.44■□□□□ 0.22
LRP4-204ENST00000529921 SLC12A5Q9H2X9 1139 aa16.44■□□□□ 0.22
LRP4-204ENST00000529921 NRAPQ86VF7 1730 aa16.44■□□□□ 0.22
LRP4-204ENST00000529921 TTC21BQ7Z4L5 1316 aa16.44■□□□□ 0.22
LRP4-204ENST00000529921 NRKQ7Z2Y5 1582 aa16.43■□□□□ 0.22
LRP4-204ENST00000529921 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.43■□□□□ 0.22
LRP4-204ENST00000529921 A0A0G2JS52 829 aa16.42■□□□□ 0.22
LRP4-204ENST00000529921 SOX12O15370 315 aa16.42■□□□□ 0.22
LRP4-204ENST00000529921 MYT1Q01538 1121 aa16.42■□□□□ 0.22
LRP4-204ENST00000529921 VPS72Q15906 364 aa16.42■□□□□ 0.22
LRP4-204ENST00000529921 STRN4Q9NRL3 753 aa16.42■□□□□ 0.22
LRP4-204ENST00000529921 TERF2IPQ9NYB0 399 aa16.42■□□□□ 0.22
LRP4-204ENST00000529921 CPSF1Q10570 1443 aaKnown RBP16.42■□□□□ 0.22
LRP4-204ENST00000529921 GLI3P10071 1580 aa16.42■□□□□ 0.22
LRP4-204ENST00000529921 USP19O94966 1318 aa16.42■□□□□ 0.22
LRP4-204ENST00000529921 GCP02774 474 aa16.41■□□□□ 0.22
LRP4-204ENST00000529921 TTC21AQ8NDW8 1320 aa16.41■□□□□ 0.22
LRP4-204ENST00000529921 SSH2Q76I76 1423 aa16.4■□□□□ 0.22
LRP4-204ENST00000529921 EVA1CP58658 441 aa16.4■□□□□ 0.22
LRP4-204ENST00000529921 PUS7Q96PZ0 661 aaKnown RBP16.4■□□□□ 0.22
LRP4-204ENST00000529921 CD163L1Q9NR16 1453 aa16.38■□□□□ 0.21
LRP4-204ENST00000529921 CDCA8Q53HL2 280 aa16.38■□□□□ 0.21
LRP4-204ENST00000529921 POLR3GLQ9BT43 218 aa16.38■□□□□ 0.21
LRP4-204ENST00000529921 BRWD3Q6RI45 1802 aa16.38■□□□□ 0.21
LRP4-204ENST00000529921 A0A1W2PP64 1363 aa16.38■□□□□ 0.21
LRP4-204ENST00000529921 SLIT3O75094 1523 aa16.37■□□□□ 0.21
LRP4-204ENST00000529921 NME9Q86XW9 330 aa16.37■□□□□ 0.21
LRP4-204ENST00000529921 NINLQ9Y2I6 1382 aa16.37■□□□□ 0.21
LRP4-204ENST00000529921 FAM98CQ17RN3 349 aaKnown RBP16.36■□□□□ 0.21
LRP4-204ENST00000529921 SEPT12Q8IYM1 358 aa16.36■□□□□ 0.21
LRP4-204ENST00000529921 UPF1Q92900 1129 aaKnown RBP eCLIP16.36■□□□□ 0.21
LRP4-204ENST00000529921 USP35Q9P2H5 1018 aa16.36■□□□□ 0.21
LRP4-204ENST00000529921 ZRANB1Q9UGI0 708 aa16.36■□□□□ 0.21
LRP4-204ENST00000529921 CPDO75976 1380 aa16.36■□□□□ 0.21
LRP4-204ENST00000529921 EDC4Q6P2E9 1401 aaKnown RBP16.36■□□□□ 0.21
LRP4-204ENST00000529921 EIF4G2P78344 907 aaKnown RBP eCLIP16.35■□□□□ 0.21
LRP4-204ENST00000529921 KCNH5Q8NCM2 988 aa16.35■□□□□ 0.21
LRP4-204ENST00000529921 CAMTA1Q9Y6Y1 1673 aa16.34■□□□□ 0.21
LRP4-204ENST00000529921 SPATA31A5Q5VU36 1347 aa16.34■□□□□ 0.21
LRP4-204ENST00000529921 SPATA31A7Q8IWB4 1347 aa16.34■□□□□ 0.21
LRP4-204ENST00000529921 LMO7Q8WWI1 1683 aa16.34■□□□□ 0.21
LRP4-204ENST00000529921 RGPD5Q99666 1765 aa16.33■□□□□ 0.21
LRP4-204ENST00000529921 HSPA5P11021 654 aaKnown RBP16.33■□□□□ 0.2
LRP4-204ENST00000529921 LARP1Q6PKG0 1096 aaKnown RBP16.32■□□□□ 0.2
LRP4-204ENST00000529921 ANKRD36BQ8N2N9 1353 aa16.31■□□□□ 0.2
LRP4-204ENST00000529921 SPATA31A1Q5TZJ5 1347 aa16.31■□□□□ 0.2
LRP4-204ENST00000529921 LTN1O94822 1766 aa16.31■□□□□ 0.2
LRP4-204ENST00000529921 AATKQ6ZMQ8 1374 aa16.3■□□□□ 0.2
LRP4-204ENST00000529921 KRT27Q7Z3Y8 459 aa16.3■□□□□ 0.2
LRP4-204ENST00000529921 USP54Q70EL1 1684 aa16.3■□□□□ 0.2
LRP4-204ENST00000529921 COL5A2P05997 1499 aaPredicted RBP16.29■□□□□ 0.2
LRP4-204ENST00000529921 USP31Q70CQ4 1352 aa16.29■□□□□ 0.2
LRP4-204ENST00000529921 COL18A1P39060 1754 aa16.29■□□□□ 0.2
LRP4-204ENST00000529921 CSB-PGBD3P0DP91 1061 aa16.29■□□□□ 0.2
LRP4-204ENST00000529921 ARHGEF25Q86VW2 580 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms