RNA–Protein interactions for RNA: ENST00000529757.5

PACS1-209, Transcript of phosphofurin acidic cluster sorting protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PACS1, Length 1,688 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1-209ENST00000529757 PHF8Q9UPP1 1060 aa22.32■■□□□ 1.16
PACS1-209ENST00000529757 SSH2Q76I76 1423 aa22.31■■□□□ 1.16
PACS1-209ENST00000529757 ZNF335Q9H4Z2 1342 aaPredicted RBP22.3■■□□□ 1.16
PACS1-209ENST00000529757 TTC21AQ8NDW8 1320 aa22.29■■□□□ 1.16
PACS1-209ENST00000529757 ATF3P18847 181 aa22.29■■□□□ 1.16
PACS1-209ENST00000529757 ESCO1Q5FWF5 840 aa22.29■■□□□ 1.16
PACS1-209ENST00000529757 SCAF1Q9H7N4 1312 aaKnown RBP22.28■■□□□ 1.16
PACS1-209ENST00000529757 LRRC7Q96NW7 1537 aa22.28■■□□□ 1.16
PACS1-209ENST00000529757 COG3Q96JB2 828 aa22.28■■□□□ 1.16
PACS1-209ENST00000529757 MTHFSP49914 203 aa22.27■■□□□ 1.16
PACS1-209ENST00000529757 INSRP06213 1382 aa22.27■■□□□ 1.16
PACS1-209ENST00000529757 MSH6P52701 1360 aa22.27■■□□□ 1.16
PACS1-209ENST00000529757 C1orf167Q5SNV9 1468 aa22.26■■□□□ 1.15
PACS1-209ENST00000529757 WDR43Q15061 677 aaKnown RBP eCLIP22.26■■□□□ 1.15
PACS1-209ENST00000529757 CFAP53Q96M91 514 aa22.26■■□□□ 1.15
PACS1-209ENST00000529757 ZRANB1Q9UGI0 708 aa22.26■■□□□ 1.15
PACS1-209ENST00000529757 XIRP1Q702N8 1843 aaKnown RBP22.25■■□□□ 1.15
PACS1-209ENST00000529757 MST1RQ04912 1400 aa22.24■■□□□ 1.15
PACS1-209ENST00000529757 CADPS2Q86UW7 1296 aa22.24■■□□□ 1.15
PACS1-209ENST00000529757 OVOS2A0A0J9YW53 1432 aa22.24■■□□□ 1.15
PACS1-209ENST00000529757 OVOS2Q6IE36 1432 aa22.24■■□□□ 1.15
PACS1-209ENST00000529757 ORAI2Q96SN7 254 aa22.23■■□□□ 1.15
PACS1-209ENST00000529757 KIF1AQ12756 1690 aa22.22■■□□□ 1.15
PACS1-209ENST00000529757 AATKQ6ZMQ8 1374 aa22.22■■□□□ 1.15
PACS1-209ENST00000529757 BLMP54132 1417 aaPredicted RBP22.21■■□□□ 1.15
PACS1-209ENST00000529757 ADAMTS8Q9UP79 889 aa22.2■■□□□ 1.15
PACS1-209ENST00000529757 USP31Q70CQ4 1352 aa22.2■■□□□ 1.14
PACS1-209ENST00000529757 PIK3C2AO00443 1686 aa22.2■■□□□ 1.14
PACS1-209ENST00000529757 PSME1Q06323 249 aa22.2■■□□□ 1.14
PACS1-209ENST00000529757 ZBED9Q6R2W3 1325 aa22.19■■□□□ 1.14
PACS1-209ENST00000529757 SHPRHQ149N8 1683 aa22.19■■□□□ 1.14
PACS1-209ENST00000529757 POLKQ9UBT6 870 aa22.17■■□□□ 1.14
PACS1-209ENST00000529757 SMG6Q86US8 1419 aaKnown RBP22.17■■□□□ 1.14
PACS1-209ENST00000529757 PAK3O75914 559 aaPredicted RBP22.17■■□□□ 1.14
PACS1-209ENST00000529757 COL3A1P02461 1466 aaPredicted RBP22.16■■□□□ 1.14
PACS1-209ENST00000529757 FOXO3O43524 673 aa22.16■■□□□ 1.14
PACS1-209ENST00000529757 PNPLA6Q8IY17 1366 aa22.16■■□□□ 1.14
PACS1-209ENST00000529757 USP54Q70EL1 1684 aa22.15■■□□□ 1.14
PACS1-209ENST00000529757 FBLN1P23142 703 aa22.15■■□□□ 1.14
PACS1-209ENST00000529757 MAP2P11137 1827 aaKnown RBP22.14■■□□□ 1.14
PACS1-209ENST00000529757 ABTB2Q8N961 1025 aa22.14■■□□□ 1.14
PACS1-209ENST00000529757 NLRP6P59044 892 aa22.14■■□□□ 1.13
PACS1-209ENST00000529757 CDK12Q9NYV4 1490 aaPredicted RBP22.13■■□□□ 1.13
PACS1-209ENST00000529757 EMILIN1Q9Y6C2 1016 aa22.13■■□□□ 1.13
PACS1-209ENST00000529757 PPM1GO15355 546 aaPredicted RBP22.12■■□□□ 1.13
PACS1-209ENST00000529757 NUDCQ9Y266 331 aa22.11■■□□□ 1.13
PACS1-209ENST00000529757 RRS1Q15050 365 aaKnown RBP22.11■■□□□ 1.13
PACS1-209ENST00000529757 KRT28Q7Z3Y7 464 aa22.11■■□□□ 1.13
PACS1-209ENST00000529757 MARF1Q9Y4F3 1742 aaKnown RBP22.1■■□□□ 1.13
PACS1-209ENST00000529757 DIAPH1O60610 1272 aaKnown RBP22.1■■□□□ 1.13
PACS1-209ENST00000529757 TRPM3Q9HCF6 1732 aaPredicted RBP22.09■■□□□ 1.13
PACS1-209ENST00000529757 XPCQ01831 940 aaPredicted RBP22.09■■□□□ 1.13
PACS1-209ENST00000529757 NUTM2GQ5VZR2 741 aa22.09■■□□□ 1.13
PACS1-209ENST00000529757 NPHP3Q7Z494 1330 aa22.08■■□□□ 1.12
PACS1-209ENST00000529757 SLAIN2Q9P270 581 aa22.07■■□□□ 1.12
PACS1-209ENST00000529757 SENP3-EIF4A1A0A087X0R7 540 aa22.07■■□□□ 1.12
PACS1-209ENST00000529757 SOX12O15370 315 aa22.07■■□□□ 1.12
PACS1-209ENST00000529757 LTBP4Q8N2S1 1624 aa22.06■■□□□ 1.12
PACS1-209ENST00000529757 U2AF1L5P0DN76 240 aaPredicted RBP22.06■■□□□ 1.12
PACS1-209ENST00000529757 U2AF1Q01081 240 aaKnown RBP eCLIP22.06■■□□□ 1.12
PACS1-209ENST00000529757 CCDC146Q8IYE0 955 aa22.06■■□□□ 1.12
PACS1-209ENST00000529757 U2SURPO15042 1029 aaKnown RBP22.05■■□□□ 1.12
PACS1-209ENST00000529757 BRINP3Q76B58 766 aa22.05■■□□□ 1.12
PACS1-209ENST00000529757 MAP3K19Q56UN5 1328 aa22.03■■□□□ 1.12
PACS1-209ENST00000529757 SBNO1A3KN83 1393 aa22.03■■□□□ 1.12
PACS1-209ENST00000529757 PEAK1Q9H792 1746 aa22.03■■□□□ 1.12
PACS1-209ENST00000529757 RUNDC1Q96C34 613 aa22.02■■□□□ 1.12
PACS1-209ENST00000529757 SALL2Q9Y467 1007 aaPredicted RBP22.02■■□□□ 1.12
PACS1-209ENST00000529757 PXDNQ92626 1479 aa22.02■■□□□ 1.11
PACS1-209ENST00000529757 LMOD2Q6P5Q4 547 aa22.01■■□□□ 1.11
PACS1-209ENST00000529757 DDX17Q92841 729 aaKnown RBP22.01■■□□□ 1.11
PACS1-209ENST00000529757 ALS2Q96Q42 1657 aa22.01■■□□□ 1.11
PACS1-209ENST00000529757 FLT4P35916 1363 aa22.01■■□□□ 1.11
PACS1-209ENST00000529757 KIF24Q5T7B8 1368 aa22.01■■□□□ 1.11
PACS1-209ENST00000529757 IL13P35225 146 aa22.01■■□□□ 1.11
PACS1-209ENST00000529757 APAF1O14727 1248 aa22■■□□□ 1.11
PACS1-209ENST00000529757 AEBP2Q6ZN18 517 aaPredicted RBP22■■□□□ 1.11
PACS1-209ENST00000529757 KCNH5Q8NCM2 988 aa22■■□□□ 1.11
PACS1-209ENST00000529757 SLIT3O75094 1523 aa21.99■■□□□ 1.11
PACS1-209ENST00000529757 NFAT5O94916 1531 aa21.99■■□□□ 1.11
PACS1-209ENST00000529757 TNS3Q68CZ2 1445 aa21.98■■□□□ 1.11
PACS1-209ENST00000529757 AMPHP49418 695 aa21.98■■□□□ 1.11
PACS1-209ENST00000529757 NGEFQ8N5V2 710 aa21.98■■□□□ 1.11
PACS1-209ENST00000529757 USP19O94966 1318 aa21.98■■□□□ 1.11
PACS1-209ENST00000529757 PNNQ9H307 717 aaKnown RBP21.98■■□□□ 1.11
PACS1-209ENST00000529757 PDE3BQ13370 1112 aa21.97■■□□□ 1.11
PACS1-209ENST00000529757 HSP90AB2PQ58FF8 381 aa21.97■■□□□ 1.11
PACS1-209ENST00000529757 IQSEC2Q5JU85 1478 aa21.96■■□□□ 1.11
PACS1-209ENST00000529757 EIF4A2Q14240 407 aaKnown RBP21.96■■□□□ 1.11
PACS1-209ENST00000529757 RTL1A6NKG5 1358 aa21.96■■□□□ 1.11
PACS1-209ENST00000529757 FCHSD2O94868 740 aa21.95■■□□□ 1.1
PACS1-209ENST00000529757 SPATA31A3Q5VYP0 1347 aa21.94■■□□□ 1.1
PACS1-209ENST00000529757 GCP02774 474 aa21.94■■□□□ 1.1
PACS1-209ENST00000529757 TCP11L2Q8N4U5 519 aa21.94■■□□□ 1.1
PACS1-209ENST00000529757 PLEKHF1Q96S99 279 aa21.94■■□□□ 1.1
PACS1-209ENST00000529757 SOS2Q07890 1332 aaPredicted RBP21.94■■□□□ 1.1
PACS1-209ENST00000529757 ARHGEF10O15013 1369 aa21.94■■□□□ 1.1
PACS1-209ENST00000529757 LTN1O94822 1766 aa21.93■■□□□ 1.1
PACS1-209ENST00000529757 MAPK8IP3Q9UPT6 1336 aa21.93■■□□□ 1.1
PACS1-209ENST00000529757 HOXC9P31274 260 aa21.93■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms