RNA–Protein interactions for RNA: ENST00000529558.1

AMBRA1-208, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 5

Gene AMBRA1, Length 483 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-208ENST00000529558 USP17L19D6RCP7 530 aa5.6□□□□□ -1.51
AMBRA1-208ENST00000529558 USP17L20D6RJB6 530 aa5.6□□□□□ -1.51
AMBRA1-208ENST00000529558 SLC4A3P48751 1232 aa5.6□□□□□ -1.51
AMBRA1-208ENST00000529558 USP17L24Q0WX57 530 aa5.6□□□□□ -1.51
AMBRA1-208ENST00000529558 PTK7Q13308 1070 aa5.6□□□□□ -1.51
AMBRA1-208ENST00000529558 LARP1Q6PKG0 1096 aaKnown RBP5.6□□□□□ -1.51
AMBRA1-208ENST00000529558 FAM200AQ8TCP9 573 aa5.6□□□□□ -1.51
AMBRA1-208ENST00000529558 ZBED2Q9BTP6 218 aa5.6□□□□□ -1.51
AMBRA1-208ENST00000529558 CDCA7Q9BWT1 371 aaPredicted RBP5.6□□□□□ -1.51
AMBRA1-208ENST00000529558 CFHP08603 1231 aa5.59□□□□□ -1.51
AMBRA1-208ENST00000529558 HMGB1P09429 215 aaKnown RBP5.59□□□□□ -1.51
AMBRA1-208ENST00000529558 POTEIP0CG38 1075 aa5.59□□□□□ -1.51
AMBRA1-208ENST00000529558 MARSP56192 900 aaKnown RBP5.59□□□□□ -1.51
AMBRA1-208ENST00000529558 DEPDC4Q8N2C3 294 aa5.59□□□□□ -1.51
AMBRA1-208ENST00000529558 FAM174AQ8TBP5 190 aa5.59□□□□□ -1.51
AMBRA1-208ENST00000529558 BCL2L13Q9BXK5 485 aa5.59□□□□□ -1.51
AMBRA1-208ENST00000529558 FKBPLQ9UIM3 349 aa5.59□□□□□ -1.51
AMBRA1-208ENST00000529558 ATP5J2-PTCD1G3V325 749 aa5.58□□□□□ -1.52
AMBRA1-208ENST00000529558 LZTS3O60299 673 aaPredicted RBP5.58□□□□□ -1.52
AMBRA1-208ENST00000529558 RASA1P20936 1047 aa5.58□□□□□ -1.52
AMBRA1-208ENST00000529558 SERPINB4P48594 390 aa5.58□□□□□ -1.52
AMBRA1-208ENST00000529558 KCNK17Q96T54 332 aa5.58□□□□□ -1.52
AMBRA1-208ENST00000529558 RABGEF1Q9UJ41 708 aa5.58□□□□□ -1.52
AMBRA1-208ENST00000529558 ZC3H4Q9UPT8 1303 aaKnown RBP5.57□□□□□ -1.52
AMBRA1-208ENST00000529558 ATP2B4P23634 1241 aa5.57□□□□□ -1.52
AMBRA1-208ENST00000529558 Q3C1V9 767 aa5.57□□□□□ -1.52
AMBRA1-208ENST00000529558 MORN1Q5T089 497 aa5.57□□□□□ -1.52
AMBRA1-208ENST00000529558 ANKMY2Q8IV38 441 aa5.57□□□□□ -1.52
AMBRA1-208ENST00000529558 PHTF2Q8N3S3 785 aa5.57□□□□□ -1.52
AMBRA1-208ENST00000529558 PUS7Q96PZ0 661 aaKnown RBP5.57□□□□□ -1.52
AMBRA1-208ENST00000529558 CEP126Q9P2H0 1117 aa5.57□□□□□ -1.52
AMBRA1-208ENST00000529558 HSP90B1P14625 803 aaKnown RBP5.56□□□□□ -1.52
AMBRA1-208ENST00000529558 NCOA4Q13772 614 aa5.56□□□□□ -1.52
AMBRA1-208ENST00000529558 SWI5Q1ZZU3 235 aa5.56□□□□□ -1.52
AMBRA1-208ENST00000529558 C1orf216Q8TAB5 229 aa5.56□□□□□ -1.52
AMBRA1-208ENST00000529558 GIPC2Q8TF65 315 aa5.56□□□□□ -1.52
AMBRA1-208ENST00000529558 KCNH8Q96L42 1107 aa5.56□□□□□ -1.52
AMBRA1-208ENST00000529558 SEPT9Q9UHD8 586 aaPredicted RBP5.56□□□□□ -1.52
AMBRA1-208ENST00000529558 SLC27A5Q9Y2P5 690 aa5.56□□□□□ -1.52
AMBRA1-208ENST00000529558 ANKRD33BA6NCL7 494 aa5.55□□□□□ -1.52
AMBRA1-208ENST00000529558 F12P00748 615 aaPredicted RBP5.55□□□□□ -1.52
AMBRA1-208ENST00000529558 TCF3P15923 654 aa5.55□□□□□ -1.52
AMBRA1-208ENST00000529558 MCCD1P59942 119 aaPredicted RBP5.55□□□□□ -1.52
AMBRA1-208ENST00000529558 DPYDQ12882 1025 aa5.55□□□□□ -1.52
AMBRA1-208ENST00000529558 FAM98CQ17RN3 349 aaKnown RBP5.55□□□□□ -1.52
AMBRA1-208ENST00000529558 SLFNL1Q499Z3 407 aa5.55□□□□□ -1.52
AMBRA1-208ENST00000529558 SAMD7Q7Z3H4 446 aa5.55□□□□□ -1.52
AMBRA1-208ENST00000529558 NPAS4Q8IUM7 802 aa5.55□□□□□ -1.52
AMBRA1-208ENST00000529558 ZNF592Q92610 1267 aa5.55□□□□□ -1.52
AMBRA1-208ENST00000529558 BIN2Q9UBW5 565 aaPredicted RBP5.55□□□□□ -1.52
AMBRA1-208ENST00000529558 VAMP1P23763 118 aa5.54□□□□□ -1.52
AMBRA1-208ENST00000529558 SCNN1AP37088 669 aa5.54□□□□□ -1.52
AMBRA1-208ENST00000529558 MAP7D1Q3KQU3 841 aa5.54□□□□□ -1.52
AMBRA1-208ENST00000529558 KMT5BQ4FZB7 885 aa5.54□□□□□ -1.52
AMBRA1-208ENST00000529558 ZNF326Q5BKZ1 582 aaKnown RBP5.54□□□□□ -1.52
AMBRA1-208ENST00000529558 RNF135Q8IUD6 432 aa5.54□□□□□ -1.52
AMBRA1-208ENST00000529558 PLPP7Q8NBV4 271 aa5.54□□□□□ -1.52
AMBRA1-208ENST00000529558 SLC4A5Q9BY07 1137 aa5.54□□□□□ -1.52
AMBRA1-208ENST00000529558 CHIC2Q9UKJ5 165 aa5.54□□□□□ -1.52
AMBRA1-208ENST00000529558 GPSM3Q9Y4H4 160 aa5.54□□□□□ -1.52
AMBRA1-208ENST00000529558 ACTN4O43707 911 aaKnown RBP5.53□□□□□ -1.52
AMBRA1-208ENST00000529558 PUS10Q3MIT2 529 aaKnown RBP5.53□□□□□ -1.52
AMBRA1-208ENST00000529558 OGFOD1Q8N543 542 aa5.53□□□□□ -1.52
AMBRA1-208ENST00000529558 USB1Q9BQ65 265 aaKnown RBP5.53□□□□□ -1.52
AMBRA1-208ENST00000529558 EGFL7Q9UHF1 273 aa5.53□□□□□ -1.52
AMBRA1-208ENST00000529558 SALL2Q9Y467 1007 aaPredicted RBP5.53□□□□□ -1.52
AMBRA1-208ENST00000529558 DKK1O94907 266 aa5.52□□□□□ -1.53
AMBRA1-208ENST00000529558 HOXB1P14653 301 aaPredicted RBP5.52□□□□□ -1.53
AMBRA1-208ENST00000529558 PSEN2P49810 448 aa5.52□□□□□ -1.53
AMBRA1-208ENST00000529558 CLDN10P78369 228 aa5.52□□□□□ -1.53
AMBRA1-208ENST00000529558 PTK2Q05397 1052 aa5.52□□□□□ -1.53
AMBRA1-208ENST00000529558 KCNH2Q12809 1159 aa5.52□□□□□ -1.53
AMBRA1-208ENST00000529558 EML3Q32P44 896 aa5.52□□□□□ -1.53
AMBRA1-208ENST00000529558 RNF19BQ6ZMZ0 732 aa5.52□□□□□ -1.53
AMBRA1-208ENST00000529558 TAS1R3Q7RTX0 852 aa5.52□□□□□ -1.53
AMBRA1-208ENST00000529558 LARGE2Q8N3Y3 721 aa5.52□□□□□ -1.53
AMBRA1-208ENST00000529558 C8orf37Q96NL8 207 aa5.52□□□□□ -1.53
AMBRA1-208ENST00000529558 DNAAF2Q9NVR5 837 aaKnown RBP5.52□□□□□ -1.53
AMBRA1-208ENST00000529558 MAP10Q9P2G4 905 aa5.52□□□□□ -1.53
AMBRA1-208ENST00000529558 ZBTB7BO15156 539 aaPredicted RBP5.51□□□□□ -1.53
AMBRA1-208ENST00000529558 POTEJP0CG39 1038 aa5.51□□□□□ -1.53
AMBRA1-208ENST00000529558 ATP1A2P50993 1020 aa5.51□□□□□ -1.53
AMBRA1-208ENST00000529558 PTPRNQ16849 979 aa5.51□□□□□ -1.53
AMBRA1-208ENST00000529558 PDXDC2PQ6P474 469 aa5.51□□□□□ -1.53
AMBRA1-208ENST00000529558 BRICD5Q6PL45 260 aa5.51□□□□□ -1.53
AMBRA1-208ENST00000529558 TRAF7Q6Q0C0 670 aa5.51□□□□□ -1.53
AMBRA1-208ENST00000529558 BLOC1S3Q6QNY0 202 aa5.51□□□□□ -1.53
AMBRA1-208ENST00000529558 FBXO33Q7Z6M2 555 aa5.51□□□□□ -1.53
AMBRA1-208ENST00000529558 LAPTM4BQ86VI4 370 aa5.51□□□□□ -1.53
AMBRA1-208ENST00000529558 TRIM50Q86XT4 487 aa5.51□□□□□ -1.53
AMBRA1-208ENST00000529558 OCSTAMPQ9BR26 566 aa5.51□□□□□ -1.53
AMBRA1-208ENST00000529558 ARHGAP33O14559 1287 aa5.5□□□□□ -1.53
AMBRA1-208ENST00000529558 ICMTO60725 284 aa5.5□□□□□ -1.53
AMBRA1-208ENST00000529558 OCLNQ16625 522 aa5.5□□□□□ -1.53
AMBRA1-208ENST00000529558 TSGA10IPQ3SY00 556 aa5.5□□□□□ -1.53
AMBRA1-208ENST00000529558 FAM177A1Q8N128 213 aaPredicted RBP5.5□□□□□ -1.53
AMBRA1-208ENST00000529558 SIX5Q8N196 739 aa5.5□□□□□ -1.53
AMBRA1-208ENST00000529558 GPKOWQ92917 476 aaPredicted RBP eCLIP5.5□□□□□ -1.53
AMBRA1-208ENST00000529558 ZNF594Q96JF6 807 aaPredicted RBP5.5□□□□□ -1.53
AMBRA1-208ENST00000529558 DRC1Q96MC2 740 aa5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms