RNA–Protein interactions for RNA: ENST00000529355.1

CTR9-204, Transcript of CTR9 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene CTR9, Length 1,146 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9-204ENST00000529355 LOC100996750A0A140TA64 210 aa9.77□□□□□ -0.85
CTR9-204ENST00000529355 TREML4Q6UXN2 200 aa9.77□□□□□ -0.85
CTR9-204ENST00000529355 KRTAP4-6Q9BYQ5 205 aa9.77□□□□□ -0.85
CTR9-204ENST00000529355 GDPD2Q9HCC8 539 aa9.77□□□□□ -0.85
CTR9-204ENST00000529355 FLIIQ13045 1269 aa9.76□□□□□ -0.85
CTR9-204ENST00000529355 LIAT1Q6ZQX7 453 aa9.76□□□□□ -0.85
CTR9-204ENST00000529355 COG6Q9Y2V7 657 aa9.76□□□□□ -0.85
CTR9-204ENST00000529355 ANKLE1Q8NAG6 615 aa9.75□□□□□ -0.85
CTR9-204ENST00000529355 UNC93B1Q9H1C4 597 aa9.75□□□□□ -0.85
CTR9-204ENST00000529355 STK17AQ9UEE5 414 aa9.75□□□□□ -0.85
CTR9-204ENST00000529355 UBTFP17480 764 aaKnown RBP9.73□□□□□ -0.85
CTR9-204ENST00000529355 LINC01559Q495D7 138 aa9.73□□□□□ -0.85
CTR9-204ENST00000529355 C14orf37Q86TY3 774 aa9.73□□□□□ -0.85
CTR9-204ENST00000529355 BAP1Q92560 729 aa9.73□□□□□ -0.85
CTR9-204ENST00000529355 GGCXP38435 758 aa9.72□□□□□ -0.85
CTR9-204ENST00000529355 ABL2P42684 1182 aa9.71□□□□□ -0.86
CTR9-204ENST00000529355 IRF5Q13568 498 aa9.71□□□□□ -0.86
CTR9-204ENST00000529355 LCE2AQ5TA79 106 aaPredicted RBP9.71□□□□□ -0.86
CTR9-204ENST00000529355 SKOR1P84550 965 aa9.69□□□□□ -0.86
CTR9-204ENST00000529355 OCSTAMPQ9BR26 566 aa9.69□□□□□ -0.86
CTR9-204ENST00000529355 FKBPLQ9UIM3 349 aa9.69□□□□□ -0.86
CTR9-204ENST00000529355 PKDCCQ504Y2 493 aa9.68□□□□□ -0.86
CTR9-204ENST00000529355 NDUFB9Q9Y6M9 179 aa9.68□□□□□ -0.86
CTR9-204ENST00000529355 SH3BP2P78314 561 aa9.67□□□□□ -0.86
CTR9-204ENST00000529355 TRIM32Q13049 653 aa9.67□□□□□ -0.86
CTR9-204ENST00000529355 FOXJ1Q92949 421 aa9.67□□□□□ -0.86
CTR9-204ENST00000529355 SOCS7O14512 581 aa9.66□□□□□ -0.86
CTR9-204ENST00000529355 SLC19A1P41440 591 aa9.66□□□□□ -0.86
CTR9-204ENST00000529355 C4orf48Q5BLP8 95 aa9.66□□□□□ -0.86
CTR9-204ENST00000529355 ZMYND15Q9H091 742 aa9.66□□□□□ -0.86
CTR9-204ENST00000529355 ZBTB24O43167 697 aaPredicted RBP9.65□□□□□ -0.86
CTR9-204ENST00000529355 DGAT1O75907 488 aa9.65□□□□□ -0.86
CTR9-204ENST00000529355 MYT1Q01538 1121 aa9.65□□□□□ -0.86
CTR9-204ENST00000529355 FNBP4Q8N3X1 1017 aaPredicted RBP9.65□□□□□ -0.86
CTR9-204ENST00000529355 ZNF511Q8NB15 262 aa9.64□□□□□ -0.87
CTR9-204ENST00000529355 POM121CA8CG34 1229 aa9.63□□□□□ -0.87
CTR9-204ENST00000529355 POTECB2RU33 542 aa9.63□□□□□ -0.87
CTR9-204ENST00000529355 FBXO45P0C2W1 286 aa9.63□□□□□ -0.87
CTR9-204ENST00000529355 VAC14Q08AM6 782 aa9.63□□□□□ -0.87
CTR9-204ENST00000529355 A6NJR5 290 aa9.62□□□□□ -0.87
CTR9-204ENST00000529355 RAD21O60216 631 aa9.62□□□□□ -0.87
CTR9-204ENST00000529355 RPIAP49247 311 aa9.62□□□□□ -0.87
CTR9-204ENST00000529355 INSM1Q01101 510 aaPredicted RBP9.62□□□□□ -0.87
CTR9-204ENST00000529355 SPRYD7Q5W111 196 aa9.62□□□□□ -0.87
CTR9-204ENST00000529355 SH3BP5LQ7L8J4 393 aa9.62□□□□□ -0.87
CTR9-204ENST00000529355 PROSER2Q86WR7 435 aaPredicted RBP9.61□□□□□ -0.87
CTR9-204ENST00000529355 PDXDC2PQ6P474 469 aa9.6□□□□□ -0.87
CTR9-204ENST00000529355 CARD14Q9BXL6 1004 aa9.6□□□□□ -0.87
CTR9-204ENST00000529355 MAGEB6P1A0A0J9YX57 407 aa9.59□□□□□ -0.87
CTR9-204ENST00000529355 APBB1O00213 710 aa9.59□□□□□ -0.87
CTR9-204ENST00000529355 TRAK2O60296 914 aa9.59□□□□□ -0.87
CTR9-204ENST00000529355 CD2BP2O95400 341 aaKnown RBP9.59□□□□□ -0.87
CTR9-204ENST00000529355 RC3H1Q5TC82 1133 aaKnown RBP9.59□□□□□ -0.87
CTR9-204ENST00000529355 SH3RF1Q7Z6J0 888 aa9.59□□□□□ -0.87
CTR9-204ENST00000529355 ARMC2Q8NEN0 867 aa9.59□□□□□ -0.87
CTR9-204ENST00000529355 ZNF777Q9ULD5 760 aaPredicted RBP9.59□□□□□ -0.87
CTR9-204ENST00000529355 ARID3CA6NKF2 412 aa9.58□□□□□ -0.88
CTR9-204ENST00000529355 SUPT5HO00267 1087 aaKnown RBP9.58□□□□□ -0.88
CTR9-204ENST00000529355 AGERQ15109 404 aa9.58□□□□□ -0.88
CTR9-204ENST00000529355 ZNF697Q5TEC3 545 aa9.58□□□□□ -0.88
CTR9-204ENST00000529355 ARHGAP9Q9BRR9 750 aa9.58□□□□□ -0.88
CTR9-204ENST00000529355 ZBBXA8MT70 800 aa9.57□□□□□ -0.88
CTR9-204ENST00000529355 WFS1O76024 890 aa9.57□□□□□ -0.88
CTR9-204ENST00000529355 FOXC1Q12948 553 aa9.57□□□□□ -0.88
CTR9-204ENST00000529355 NBPF14Q5TI25 921 aa9.57□□□□□ -0.88
CTR9-204ENST00000529355 ADAM32Q8TC27 787 aa9.57□□□□□ -0.88
CTR9-204ENST00000529355 ADAMTS19Q8TE59 1207 aa9.57□□□□□ -0.88
CTR9-204ENST00000529355 PRM3Q9NNZ6 103 aa9.57□□□□□ -0.88
CTR9-204ENST00000529355 PKD2L1Q9P0L9 805 aa9.57□□□□□ -0.88
CTR9-204ENST00000529355 TRIM67Q6ZTA4 783 aa9.56□□□□□ -0.88
CTR9-204ENST00000529355 ZNF598Q86UK7 904 aaKnown RBP9.56□□□□□ -0.88
CTR9-204ENST00000529355 ZNF330Q9Y3S2 320 aaPredicted RBP9.56□□□□□ -0.88
CTR9-204ENST00000529355 ZC3H4Q9UPT8 1303 aaKnown RBP9.56□□□□□ -0.88
CTR9-204ENST00000529355 PTK2Q05397 1052 aa9.55□□□□□ -0.88
CTR9-204ENST00000529355 NR1H3Q13133 447 aa9.55□□□□□ -0.88
CTR9-204ENST00000529355 GPKOWQ92917 476 aaPredicted RBP eCLIP9.55□□□□□ -0.88
CTR9-204ENST00000529355 MRGPRX2Q96LB1 330 aa9.55□□□□□ -0.88
CTR9-204ENST00000529355 C1orf115Q9H7X2 142 aa9.55□□□□□ -0.88
CTR9-204ENST00000529355 TNFRSF10AO00220 468 aa9.54□□□□□ -0.88
CTR9-204ENST00000529355 WIPF1O43516 503 aa9.54□□□□□ -0.88
CTR9-204ENST00000529355 WNT7BP56706 349 aa9.54□□□□□ -0.88
CTR9-204ENST00000529355 ERFEQ4G0M1 354 aa9.54□□□□□ -0.88
CTR9-204ENST00000529355 BPHLQ86WA6 291 aaPredicted RBP9.54□□□□□ -0.88
CTR9-204ENST00000529355 SIAH2O43255 324 aa9.53□□□□□ -0.88
CTR9-204ENST00000529355 ZBTB33Q86T24 672 aa9.53□□□□□ -0.88
CTR9-204ENST00000529355 PNMA1Q8ND90 353 aa9.53□□□□□ -0.88
CTR9-204ENST00000529355 EHBP1Q8NDI1 1231 aa9.53□□□□□ -0.88
CTR9-204ENST00000529355 TLL2Q9Y6L7 1015 aa9.53□□□□□ -0.88
CTR9-204ENST00000529355 GDF9O60383 454 aa9.52□□□□□ -0.89
CTR9-204ENST00000529355 PRR20EP86478 221 aa9.52□□□□□ -0.89
CTR9-204ENST00000529355 PRR20CP86479 221 aa9.52□□□□□ -0.89
CTR9-204ENST00000529355 PRR20DP86480 221 aa9.52□□□□□ -0.89
CTR9-204ENST00000529355 PRR20BP86481 221 aa9.52□□□□□ -0.89
CTR9-204ENST00000529355 PRR20AP86496 221 aa9.52□□□□□ -0.89
CTR9-204ENST00000529355 C1QTNF2Q9BXJ5 285 aa9.52□□□□□ -0.89
CTR9-204ENST00000529355 WNT7AO00755 349 aa9.51□□□□□ -0.89
CTR9-204ENST00000529355 GPSM3Q9Y4H4 160 aa9.51□□□□□ -0.89
CTR9-204ENST00000529355 PCDHB9Q9Y5E1 797 aa9.51□□□□□ -0.89
CTR9-204ENST00000529355 WASHC4Q2M389 1173 aa9.5□□□□□ -0.89
CTR9-204ENST00000529355 HDGFL1Q5TGJ6 251 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms