RNA–Protein interactions for RNA: ENST00000529273.1

ROM1-204, Transcript of retinal outer segment membrane protein 1, humanhuman

TSL 4

Gene ROM1, Length 249 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ROM1-204ENST00000529273 NBPF8Q3BBV2 869 aa39.69■■■■□ 3.94
ROM1-204ENST00000529273 VPS72Q15906 364 aa39.67■■■■□ 3.94
ROM1-204ENST00000529273 CABP2Q9NPB3 220 aa39.66■■■■□ 3.94
ROM1-204ENST00000529273 TOPAZ1Q8N9V7 1692 aa39.64■■■■□ 3.94
ROM1-204ENST00000529273 ROCK2O75116 1388 aaKnown RBP39.64■■■■□ 3.94
ROM1-204ENST00000529273 TRIM26Q12899 539 aaPredicted RBP39.64■■■■□ 3.94
ROM1-204ENST00000529273 TRPM1Q7Z4N2 1603 aa39.64■■■■□ 3.94
ROM1-204ENST00000529273 GLI3P10071 1580 aa39.63■■■■□ 3.94
ROM1-204ENST00000529273 PLCH1Q4KWH8 1693 aa39.62■■■■□ 3.93
ROM1-204ENST00000529273 CCDC9Q9Y3X0 531 aaKnown RBP39.62■■■■□ 3.93
ROM1-204ENST00000529273 NWD2Q9ULI1 1742 aa39.6■■■■□ 3.93
ROM1-204ENST00000529273 BTG4Q9NY30 223 aa39.6■■■■□ 3.93
ROM1-204ENST00000529273 PPIP5K1Q6PFW1 1433 aa39.59■■■■□ 3.93
ROM1-204ENST00000529273 QRICH2Q9H0J4 1663 aa39.59■■■■□ 3.93
ROM1-204ENST00000529273 NUTM2GQ5VZR2 741 aa39.58■■■■□ 3.93
ROM1-204ENST00000529273 PRDM11Q9NQV5 511 aa39.55■■■■□ 3.92
ROM1-204ENST00000529273 SEPT12Q8IYM1 358 aa39.53■■■■□ 3.92
ROM1-204ENST00000529273 EVC2Q86UK5 1308 aa39.53■■■■□ 3.92
ROM1-204ENST00000529273 CRYBG1Q9Y4K1 1723 aa39.53■■■■□ 3.92
ROM1-204ENST00000529273 ONECUT3O60422 494 aaPredicted RBP39.52■■■■□ 3.92
ROM1-204ENST00000529273 ABTB2Q8N961 1025 aa39.52■■■■□ 3.92
ROM1-204ENST00000529273 CABP1Q9NZU7 370 aa39.52■■■■□ 3.92
ROM1-204ENST00000529273 COL14A1Q05707 1796 aaKnown RBP39.51■■■■□ 3.92
ROM1-204ENST00000529273 KIAA0232Q92628 1395 aa39.48■■■■□ 3.91
ROM1-204ENST00000529273 TONSLQ96HA7 1378 aa39.48■■■■□ 3.91
ROM1-204ENST00000529273 ZC3H6P61129 1189 aaKnown RBP39.47■■■■□ 3.91
ROM1-204ENST00000529273 NRAPQ86VF7 1730 aa39.45■■■■□ 3.91
ROM1-204ENST00000529273 CHRNA2Q15822 529 aa39.45■■■■□ 3.91
ROM1-204ENST00000529273 CCDC125Q86Z20 511 aa39.43■■■■□ 3.9
ROM1-204ENST00000529273 CARD11Q9BXL7 1154 aa39.42■■■■□ 3.9
ROM1-204ENST00000529273 BRD4O60885 1362 aaPredicted RBP39.42■■■■□ 3.9
ROM1-204ENST00000529273 PHRF1Q9P1Y6 1649 aaKnown RBP39.41■■■■□ 3.9
ROM1-204ENST00000529273 FAM98CQ17RN3 349 aaKnown RBP39.41■■■■□ 3.9
ROM1-204ENST00000529273 NLRP13Q86W25 1043 aa39.41■■■■□ 3.9
ROM1-204ENST00000529273 USP19O94966 1318 aa39.4■■■■□ 3.9
ROM1-204ENST00000529273 SPATA31A5Q5VU36 1347 aa39.4■■■■□ 3.9
ROM1-204ENST00000529273 SPATA31A7Q8IWB4 1347 aa39.4■■■■□ 3.9
ROM1-204ENST00000529273 A0A0G2JS52 829 aa39.39■■■■□ 3.9
ROM1-204ENST00000529273 MYT1Q01538 1121 aa39.39■■■■□ 3.9
ROM1-204ENST00000529273 USP6P35125 1406 aa39.39■■■■□ 3.9
ROM1-204ENST00000529273 KRT27Q7Z3Y8 459 aa39.38■■■■□ 3.89
ROM1-204ENST00000529273 BRWD3Q6RI45 1802 aa39.35■■■■□ 3.89
ROM1-204ENST00000529273 STRN4Q9NRL3 753 aa39.34■■■■□ 3.89
ROM1-204ENST00000529273 GCP02774 474 aa39.33■■■■□ 3.89
ROM1-204ENST00000529273 NRKQ7Z2Y5 1582 aa39.32■■■■□ 3.88
ROM1-204ENST00000529273 CPDO75976 1380 aa39.32■■■■□ 3.88
ROM1-204ENST00000529273 EP400Q96L91 3159 aa39.31■■■■□ 3.88
ROM1-204ENST00000529273 SSH2Q76I76 1423 aa39.31■■■■□ 3.88
ROM1-204ENST00000529273 NLRP6P59044 892 aa39.3■■■■□ 3.88
ROM1-204ENST00000529273 SBNO2Q9Y2G9 1366 aa39.3■■■■□ 3.88
ROM1-204ENST00000529273 BLMP54132 1417 aaPredicted RBP39.3■■■■□ 3.88
ROM1-204ENST00000529273 ZNF692Q9BU19 519 aaPredicted RBP39.29■■■■□ 3.88
ROM1-204ENST00000529273 EVA1CP58658 441 aa39.28■■■■□ 3.88
ROM1-204ENST00000529273 SPATA31A1Q5TZJ5 1347 aa39.28■■■■□ 3.88
ROM1-204ENST00000529273 CAMTA1Q9Y6Y1 1673 aa39.22■■■■□ 3.87
ROM1-204ENST00000529273 TTC21BQ7Z4L5 1316 aa39.22■■■■□ 3.87
ROM1-204ENST00000529273 SF3B2Q13435 895 aaKnown RBP39.2■■■■□ 3.87
ROM1-204ENST00000529273 CPSF1Q10570 1443 aaKnown RBP39.2■■■■□ 3.87
ROM1-204ENST00000529273 LARP1Q6PKG0 1096 aaKnown RBP39.19■■■■□ 3.86
ROM1-204ENST00000529273 USP35Q9P2H5 1018 aa39.19■■■■□ 3.86
ROM1-204ENST00000529273 ZBTB7CA1YPR0 619 aa39.17■■■■□ 3.86
ROM1-204ENST00000529273 KTN1Q86UP2 1357 aaKnown RBP39.17■■■■□ 3.86
ROM1-204ENST00000529273 LMO7Q8WWI1 1683 aa39.16■■■■□ 3.86
ROM1-204ENST00000529273 SLIT3O75094 1523 aa39.16■■■■□ 3.86
ROM1-204ENST00000529273 DEFB132Q7Z7B7 95 aa39.16■■■■□ 3.86
ROM1-204ENST00000529273 THSD7AQ9UPZ6 1657 aa39.16■■■■□ 3.86
ROM1-204ENST00000529273 TTC21AQ8NDW8 1320 aa39.15■■■■□ 3.86
ROM1-204ENST00000529273 FAM182BQ5T319 152 aa39.15■■■■□ 3.86
ROM1-204ENST00000529273 PIK3C2AO00443 1686 aa39.15■■■■□ 3.86
ROM1-204ENST00000529273 ZRANB1Q9UGI0 708 aa39.14■■■■□ 3.86
ROM1-204ENST00000529273 BARGINQ6ZT62 677 aa39.12■■■■□ 3.85
ROM1-204ENST00000529273 AATKQ6ZMQ8 1374 aa39.11■■■■□ 3.85
ROM1-204ENST00000529273 AKAP12Q02952 1782 aa39.11■■■■□ 3.85
ROM1-204ENST00000529273 TMC1Q8TDI8 760 aa39.11■■■■□ 3.85
ROM1-204ENST00000529273 TCP11L2Q8N4U5 519 aa39.1■■■■□ 3.85
ROM1-204ENST00000529273 COL5A2P05997 1499 aaPredicted RBP39.09■■■■□ 3.85
ROM1-204ENST00000529273 KCNH5Q8NCM2 988 aa39.08■■■■□ 3.85
ROM1-204ENST00000529273 ST20-MTHFSA0A0A6YYL1 179 aa39.07■■■■□ 3.85
ROM1-204ENST00000529273 SLC12A5Q9H2X9 1139 aa39.07■■■■□ 3.85
ROM1-204ENST00000529273 PUS7Q96PZ0 661 aaKnown RBP39.06■■■■□ 3.84
ROM1-204ENST00000529273 SOX12O15370 315 aa39.05■■■■□ 3.84
ROM1-204ENST00000529273 SUGP2Q8IX01 1082 aaKnown RBP eCLIP39.05■■■■□ 3.84
ROM1-204ENST00000529273 TESK2Q96S53 571 aa39.05■■■■□ 3.84
ROM1-204ENST00000529273 CD163L1Q9NR16 1453 aa39.05■■■■□ 3.84
ROM1-204ENST00000529273 ARHGEF25Q86VW2 580 aa39.04■■■■□ 3.84
ROM1-204ENST00000529273 THRAP3Q9Y2W1 955 aaKnown RBP39.04■■■■□ 3.84
ROM1-204ENST00000529273 HDGFL2Q7Z4V5 671 aaPredicted RBP39.03■■■■□ 3.84
ROM1-204ENST00000529273 BAG6P46379 1132 aa39.02■■■■□ 3.84
ROM1-204ENST00000529273 AXIN2Q9Y2T1 843 aa39.01■■■■□ 3.84
ROM1-204ENST00000529273 CRB1P82279 1406 aa39■■■■□ 3.83
ROM1-204ENST00000529273 PDE3BQ13370 1112 aa38.99■■■■□ 3.83
ROM1-204ENST00000529273 FAM196AQ6ZSG2 479 aa38.99■■■■□ 3.83
ROM1-204ENST00000529273 TERF2IPQ9NYB0 399 aa38.99■■■■□ 3.83
ROM1-204ENST00000529273 MON2Q7Z3U7 1717 aa38.98■■■■□ 3.83
ROM1-204ENST00000529273 SLC24A1O60721 1099 aa38.97■■■■□ 3.83
ROM1-204ENST00000529273 NME9Q86XW9 330 aa38.97■■■■□ 3.83
ROM1-204ENST00000529273 PCGF6Q9BYE7 350 aa38.97■■■■□ 3.83
ROM1-204ENST00000529273 USP31Q70CQ4 1352 aa38.96■■■■□ 3.83
ROM1-204ENST00000529273 TOM1L2Q6ZVM7 507 aa38.95■■■■□ 3.83
ROM1-204ENST00000529273 COL18A1P39060 1754 aa38.95■■■■□ 3.83
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms