RNA–Protein interactions for RNA: ENST00000529205.1

HIF3A-212, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 4

Gene HIF3A, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-212ENST00000529205 PRDM11Q9NQV5 511 aa19.88■□□□□ 0.77
HIF3A-212ENST00000529205 ADGRB2O60241 1585 aa19.87■□□□□ 0.77
HIF3A-212ENST00000529205 WASLO00401 505 aaPredicted RBP19.87■□□□□ 0.77
HIF3A-212ENST00000529205 NRAPQ86VF7 1730 aa19.85■□□□□ 0.77
HIF3A-212ENST00000529205 FAM182BQ5T319 152 aa19.85■□□□□ 0.77
HIF3A-212ENST00000529205 RGPD1P0DJD0 1748 aa19.85■□□□□ 0.77
HIF3A-212ENST00000529205 R3HDM1Q15032 1099 aaKnown RBP19.84■□□□□ 0.77
HIF3A-212ENST00000529205 STAC3Q96MF2 364 aa19.84■□□□□ 0.77
HIF3A-212ENST00000529205 TULP4Q9NRJ4 1543 aa19.84■□□□□ 0.77
HIF3A-212ENST00000529205 TRPM3Q9HCF6 1732 aaPredicted RBP19.84■□□□□ 0.77
HIF3A-212ENST00000529205 KDM2AQ9Y2K7 1162 aa19.83■□□□□ 0.77
HIF3A-212ENST00000529205 PRR36Q9H6K5 1346 aa19.82■□□□□ 0.76
HIF3A-212ENST00000529205 ALS2Q96Q42 1657 aa19.82■□□□□ 0.76
HIF3A-212ENST00000529205 FAM196AQ6ZSG2 479 aa19.82■□□□□ 0.76
HIF3A-212ENST00000529205 DCAF11Q8TEB1 546 aa19.82■□□□□ 0.76
HIF3A-212ENST00000529205 STRN4Q9NRL3 753 aa19.81■□□□□ 0.76
HIF3A-212ENST00000529205 ADGRB1O14514 1584 aa19.8■□□□□ 0.76
HIF3A-212ENST00000529205 DISP2A7MBM2 1401 aa19.8■□□□□ 0.76
HIF3A-212ENST00000529205 EZH2Q15910 746 aaKnown RBP19.8■□□□□ 0.76
HIF3A-212ENST00000529205 SPATA31A1Q5TZJ5 1347 aa19.79■□□□□ 0.76
HIF3A-212ENST00000529205 EVA1CP58658 441 aa19.79■□□□□ 0.76
HIF3A-212ENST00000529205 TRIM37O94972 964 aa19.78■□□□□ 0.76
HIF3A-212ENST00000529205 KIAA0232Q92628 1395 aa19.78■□□□□ 0.76
HIF3A-212ENST00000529205 APBA3O96018 575 aa19.77■□□□□ 0.76
HIF3A-212ENST00000529205 PDE3BQ13370 1112 aa19.77■□□□□ 0.76
HIF3A-212ENST00000529205 CHRNA2Q15822 529 aa19.77■□□□□ 0.76
HIF3A-212ENST00000529205 NUDT16Q96DE0 195 aaKnown RBP19.77■□□□□ 0.76
HIF3A-212ENST00000529205 THSD7AQ9UPZ6 1657 aa19.76■□□□□ 0.75
HIF3A-212ENST00000529205 PARD3Q8TEW0 1356 aa19.76■□□□□ 0.75
HIF3A-212ENST00000529205 ZC3H6P61129 1189 aaKnown RBP19.76■□□□□ 0.75
HIF3A-212ENST00000529205 CAMKK2Q96RR4 588 aa19.75■□□□□ 0.75
HIF3A-212ENST00000529205 USP35Q9P2H5 1018 aa19.75■□□□□ 0.75
HIF3A-212ENST00000529205 ATP7BP35670 1465 aa19.74■□□□□ 0.75
HIF3A-212ENST00000529205 NBPF8Q3BBV2 869 aa19.74■□□□□ 0.75
HIF3A-212ENST00000529205 NBPF14Q5TI25 921 aa19.74■□□□□ 0.75
HIF3A-212ENST00000529205 RAB3GAP2Q9H2M9 1393 aa19.73■□□□□ 0.75
HIF3A-212ENST00000529205 BARGINQ6ZT62 677 aa19.73■□□□□ 0.75
HIF3A-212ENST00000529205 ITSN1Q15811 1721 aa19.73■□□□□ 0.75
HIF3A-212ENST00000529205 NUTM2GQ5VZR2 741 aa19.72■□□□□ 0.75
HIF3A-212ENST00000529205 CDK19Q9BWU1 502 aa19.72■□□□□ 0.75
HIF3A-212ENST00000529205 TNS1Q9HBL0 1735 aaKnown RBP19.71■□□□□ 0.75
HIF3A-212ENST00000529205 CRYBG1Q9Y4K1 1723 aa19.71■□□□□ 0.75
HIF3A-212ENST00000529205 ABTB2Q8N961 1025 aa19.7■□□□□ 0.74
HIF3A-212ENST00000529205 CCDC61Q9Y6R9 512 aa19.7■□□□□ 0.74
HIF3A-212ENST00000529205 C11orf95C9JLR9 678 aaPredicted RBP19.69■□□□□ 0.74
HIF3A-212ENST00000529205 TCP11L2Q8N4U5 519 aa19.69■□□□□ 0.74
HIF3A-212ENST00000529205 ACEP12821 1306 aa19.69■□□□□ 0.74
HIF3A-212ENST00000529205 SSH2Q76I76 1423 aa19.68■□□□□ 0.74
HIF3A-212ENST00000529205 DCAF8L1A6NGE4 600 aa19.68■□□□□ 0.74
HIF3A-212ENST00000529205 THRAP3Q9Y2W1 955 aaKnown RBP19.68■□□□□ 0.74
HIF3A-212ENST00000529205 PHRF1Q9P1Y6 1649 aaKnown RBP19.67■□□□□ 0.74
HIF3A-212ENST00000529205 NLRP13Q86W25 1043 aa19.67■□□□□ 0.74
HIF3A-212ENST00000529205 POLR3AO14802 1390 aaPredicted RBP19.67■□□□□ 0.74
HIF3A-212ENST00000529205 LARP1Q6PKG0 1096 aaKnown RBP19.66■□□□□ 0.74
HIF3A-212ENST00000529205 PLEKHG3A1L390 1219 aa19.65■□□□□ 0.74
HIF3A-212ENST00000529205 PPP1R1BQ9UD71 204 aaPredicted RBP19.65■□□□□ 0.74
HIF3A-212ENST00000529205 ARHGEF28Q8N1W1 1705 aaKnown RBP19.64■□□□□ 0.73
HIF3A-212ENST00000529205 CPDO75976 1380 aa19.63■□□□□ 0.73
HIF3A-212ENST00000529205 SPON1Q9HCB6 807 aa19.63■□□□□ 0.73
HIF3A-212ENST00000529205 GCP02774 474 aa19.62■□□□□ 0.73
HIF3A-212ENST00000529205 YY1P25490 414 aa19.62■□□□□ 0.73
HIF3A-212ENST00000529205 SRPK2P78362 688 aaKnown RBP19.61■□□□□ 0.73
HIF3A-212ENST00000529205 CAMTA1Q9Y6Y1 1673 aa19.61■□□□□ 0.73
HIF3A-212ENST00000529205 USP19O94966 1318 aa19.59■□□□□ 0.73
HIF3A-212ENST00000529205 NRKQ7Z2Y5 1582 aa19.59■□□□□ 0.73
HIF3A-212ENST00000529205 KCNQ2O43526 872 aa19.59■□□□□ 0.73
HIF3A-212ENST00000529205 BRD4O60885 1362 aaPredicted RBP19.58■□□□□ 0.73
HIF3A-212ENST00000529205 ZBTB7CA1YPR0 619 aa19.58■□□□□ 0.72
HIF3A-212ENST00000529205 RREB1Q92766 1687 aa19.58■□□□□ 0.72
HIF3A-212ENST00000529205 TOPAZ1Q8N9V7 1692 aa19.57■□□□□ 0.72
HIF3A-212ENST00000529205 CRB1P82279 1406 aa19.57■□□□□ 0.72
HIF3A-212ENST00000529205 PPIP5K1Q6PFW1 1433 aa19.56■□□□□ 0.72
HIF3A-212ENST00000529205 OVOS2A0A0G2JMS6 1433 aa19.55■□□□□ 0.72
HIF3A-212ENST00000529205 OVOS2A0A0J9YW53 1432 aa19.55■□□□□ 0.72
HIF3A-212ENST00000529205 PLSCR1O15162 318 aa19.55■□□□□ 0.72
HIF3A-212ENST00000529205 NLRP6P59044 892 aa19.55■□□□□ 0.72
HIF3A-212ENST00000529205 DDB1Q16531 1140 aa19.55■□□□□ 0.72
HIF3A-212ENST00000529205 NUP188Q5SRE5 1749 aa19.55■□□□□ 0.72
HIF3A-212ENST00000529205 OVOS2Q6IE36 1432 aa19.55■□□□□ 0.72
HIF3A-212ENST00000529205 LMO7Q8WWI1 1683 aa19.55■□□□□ 0.72
HIF3A-212ENST00000529205 COL5A2P05997 1499 aaPredicted RBP19.54■□□□□ 0.72
HIF3A-212ENST00000529205 TOM1L2Q6ZVM7 507 aa19.54■□□□□ 0.72
HIF3A-212ENST00000529205 CENPJQ9HC77 1338 aaPredicted RBP19.53■□□□□ 0.72
HIF3A-212ENST00000529205 CABP2Q9NPB3 220 aa19.53■□□□□ 0.72
HIF3A-212ENST00000529205 NINLQ9Y2I6 1382 aa19.53■□□□□ 0.72
HIF3A-212ENST00000529205 PARP4Q9UKK3 1724 aaKnown RBP19.52■□□□□ 0.72
HIF3A-212ENST00000529205 KIAA1210Q9ULL0 1709 aa19.52■□□□□ 0.72
HIF3A-212ENST00000529205 CDCA7Q9BWT1 371 aaPredicted RBP19.51■□□□□ 0.71
HIF3A-212ENST00000529205 BCL11BQ9C0K0 894 aaPredicted RBP19.51■□□□□ 0.71
HIF3A-212ENST00000529205 AATKQ6ZMQ8 1374 aa19.51■□□□□ 0.71
HIF3A-212ENST00000529205 NBPF1Q3BBV0 1214 aa19.5■□□□□ 0.71
HIF3A-212ENST00000529205 CABP1Q9NZU7 370 aa19.5■□□□□ 0.71
HIF3A-212ENST00000529205 KCNH5Q8NCM2 988 aa19.47■□□□□ 0.71
HIF3A-212ENST00000529205 USP6P35125 1406 aa19.47■□□□□ 0.71
HIF3A-212ENST00000529205 WDR17Q8IZU2 1322 aa19.46■□□□□ 0.71
HIF3A-212ENST00000529205 CSB-PGBD3P0DP91 1061 aa19.45■□□□□ 0.7
HIF3A-212ENST00000529205 ZNF692Q9BU19 519 aaPredicted RBP19.45■□□□□ 0.7
HIF3A-212ENST00000529205 RGPD3A6NKT7 1758 aaPredicted RBP19.44■□□□□ 0.7
HIF3A-212ENST00000529205 RGPD4Q7Z3J3 1758 aa19.44■□□□□ 0.7
HIF3A-212ENST00000529205 EVC2Q86UK5 1308 aa19.44■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms