RNA–Protein interactions for RNA: ENST00000528824.1

SNX7-204, Transcript of sorting nexin 7, humanhuman

TSL 1 (best)

Gene SNX7, Length 1,562 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX7-204ENST00000528824 NBPF8Q3BBV2 869 aa11.54□□□□□ -0.56
SNX7-204ENST00000528824 NBPF14Q5TI25 921 aa11.54□□□□□ -0.56
SNX7-204ENST00000528824 BRWD3Q6RI45 1802 aa11.53□□□□□ -0.56
SNX7-204ENST00000528824 ABCC11Q96J66 1382 aa11.53□□□□□ -0.56
SNX7-204ENST00000528824 WAPLQ7Z5K2 1190 aa11.53□□□□□ -0.56
SNX7-204ENST00000528824 SIRT1Q96EB6 747 aa11.53□□□□□ -0.56
SNX7-204ENST00000528824 EP400Q96L91 3159 aa11.53□□□□□ -0.56
SNX7-204ENST00000528824 TECPR2O15040 1411 aa11.52□□□□□ -0.56
SNX7-204ENST00000528824 PARD3Q8TEW0 1356 aa11.52□□□□□ -0.56
SNX7-204ENST00000528824 PPP1R1BQ9UD71 204 aaPredicted RBP11.52□□□□□ -0.57
SNX7-204ENST00000528824 ANKRD30BQ9BXX2 1392 aa11.52□□□□□ -0.57
SNX7-204ENST00000528824 FAM196AQ6ZSG2 479 aa11.51□□□□□ -0.57
SNX7-204ENST00000528824 BTG4Q9NY30 223 aa11.51□□□□□ -0.57
SNX7-204ENST00000528824 PITPNM1O00562 1244 aa11.5□□□□□ -0.57
SNX7-204ENST00000528824 PLEKHG5O94827 1062 aa11.5□□□□□ -0.57
SNX7-204ENST00000528824 CABLES1Q8TDN4 633 aa11.5□□□□□ -0.57
SNX7-204ENST00000528824 DISP2A7MBM2 1401 aa11.5□□□□□ -0.57
SNX7-204ENST00000528824 RGPD1P0DJD0 1748 aa11.5□□□□□ -0.57
SNX7-204ENST00000528824 FAM83GA6ND36 823 aa11.5□□□□□ -0.57
SNX7-204ENST00000528824 ADGRB2O60241 1585 aa11.49□□□□□ -0.57
SNX7-204ENST00000528824 RRBP1Q9P2E9 1410 aaKnown RBP11.49□□□□□ -0.57
SNX7-204ENST00000528824 GPRASP1Q5JY77 1395 aa11.48□□□□□ -0.57
SNX7-204ENST00000528824 C11orf95C9JLR9 678 aaPredicted RBP11.48□□□□□ -0.57
SNX7-204ENST00000528824 PLCH1Q4KWH8 1693 aa11.47□□□□□ -0.57
SNX7-204ENST00000528824 PPLO60437 1756 aa11.47□□□□□ -0.57
SNX7-204ENST00000528824 APBA3O96018 575 aa11.47□□□□□ -0.57
SNX7-204ENST00000528824 EZH2Q15910 746 aaKnown RBP11.47□□□□□ -0.57
SNX7-204ENST00000528824 SPON1Q9HCB6 807 aa11.47□□□□□ -0.57
SNX7-204ENST00000528824 FMN2Q9NZ56 1722 aa11.47□□□□□ -0.57
SNX7-204ENST00000528824 EIF3AQ14152 1382 aaKnown RBP11.47□□□□□ -0.57
SNX7-204ENST00000528824 DHX57Q6P158 1386 aaKnown RBP11.47□□□□□ -0.57
SNX7-204ENST00000528824 SPATA31A5Q5VU36 1347 aa11.47□□□□□ -0.57
SNX7-204ENST00000528824 SPATA31A7Q8IWB4 1347 aa11.47□□□□□ -0.57
SNX7-204ENST00000528824 RGL3Q3MIN7 710 aa11.46□□□□□ -0.57
SNX7-204ENST00000528824 NRXN1Q9ULB1 1477 aa11.46□□□□□ -0.57
SNX7-204ENST00000528824 ADGRF5Q8IZF2 1346 aa11.46□□□□□ -0.58
SNX7-204ENST00000528824 PDE3BQ13370 1112 aa11.45□□□□□ -0.58
SNX7-204ENST00000528824 TMEM132EQ6IEE7 984 aa11.45□□□□□ -0.58
SNX7-204ENST00000528824 POGKQ9P215 609 aa11.45□□□□□ -0.58
SNX7-204ENST00000528824 YTHDC2Q9H6S0 1430 aaKnown RBP11.45□□□□□ -0.58
SNX7-204ENST00000528824 TRIM37O94972 964 aa11.45□□□□□ -0.58
SNX7-204ENST00000528824 CAMKK2Q96RR4 588 aa11.45□□□□□ -0.58
SNX7-204ENST00000528824 PRDM11Q9NQV5 511 aa11.45□□□□□ -0.58
SNX7-204ENST00000528824 KNDC1Q76NI1 1749 aa11.45□□□□□ -0.58
SNX7-204ENST00000528824 ANKARQ7Z5J8 1434 aa11.44□□□□□ -0.58
SNX7-204ENST00000528824 PLEKHH1Q9ULM0 1364 aa11.44□□□□□ -0.58
SNX7-204ENST00000528824 NINLQ9Y2I6 1382 aa11.44□□□□□ -0.58
SNX7-204ENST00000528824 COL14A1Q05707 1796 aaKnown RBP11.44□□□□□ -0.58
SNX7-204ENST00000528824 PMFBP1Q8TBY8 1022 aa11.43□□□□□ -0.58
SNX7-204ENST00000528824 ACIN1Q9UKV3 1341 aaKnown RBP11.43□□□□□ -0.58
SNX7-204ENST00000528824 KCNQ2O43526 872 aa11.42□□□□□ -0.58
SNX7-204ENST00000528824 EVA1CP58658 441 aa11.42□□□□□ -0.58
SNX7-204ENST00000528824 FAM182BQ5T319 152 aa11.42□□□□□ -0.58
SNX7-204ENST00000528824 SPDYE1Q8NFV5 336 aaPredicted RBP11.42□□□□□ -0.58
SNX7-204ENST00000528824 PAK3O75914 559 aaPredicted RBP11.41□□□□□ -0.58
SNX7-204ENST00000528824 NGDNQ8NEJ9 315 aaKnown RBP11.41□□□□□ -0.58
SNX7-204ENST00000528824 C14orf93Q9H972 538 aaKnown RBP11.41□□□□□ -0.58
SNX7-204ENST00000528824 CLEC11AQ9Y240 323 aa11.41□□□□□ -0.58
SNX7-204ENST00000528824 PIK3C2GO75747 1445 aa11.41□□□□□ -0.58
SNX7-204ENST00000528824 PRAM1Q96QH2 718 aa11.41□□□□□ -0.58
SNX7-204ENST00000528824 SPATA31A1Q5TZJ5 1347 aa11.4□□□□□ -0.58
SNX7-204ENST00000528824 NRAPQ86VF7 1730 aa11.39□□□□□ -0.59
SNX7-204ENST00000528824 ABCA3Q99758 1704 aa11.39□□□□□ -0.59
SNX7-204ENST00000528824 IFT172Q9UG01 1749 aa11.39□□□□□ -0.59
SNX7-204ENST00000528824 SAFB2Q14151 953 aaKnown RBP eCLIP11.39□□□□□ -0.59
SNX7-204ENST00000528824 BARGINQ6ZT62 677 aa11.39□□□□□ -0.59
SNX7-204ENST00000528824 PIP4P2Q8N4L2 257 aa11.39□□□□□ -0.59
SNX7-204ENST00000528824 STRN4Q9NRL3 753 aa11.39□□□□□ -0.59
SNX7-204ENST00000528824 TNS1Q9HBL0 1735 aaKnown RBP11.37□□□□□ -0.59
SNX7-204ENST00000528824 EVX2Q03828 476 aa11.37□□□□□ -0.59
SNX7-204ENST00000528824 THRAP3Q9Y2W1 955 aaKnown RBP11.37□□□□□ -0.59
SNX7-204ENST00000528824 SPATA31E1Q6ZUB1 1445 aa11.37□□□□□ -0.59
SNX7-204ENST00000528824 THSD7AQ9UPZ6 1657 aa11.37□□□□□ -0.59
SNX7-204ENST00000528824 FKBP8Q14318 412 aa11.37□□□□□ -0.59
SNX7-204ENST00000528824 USP35Q9P2H5 1018 aa11.37□□□□□ -0.59
SNX7-204ENST00000528824 TCP11L2Q8N4U5 519 aa11.36□□□□□ -0.59
SNX7-204ENST00000528824 RGPD8O14715 1765 aaPredicted RBP11.35□□□□□ -0.59
SNX7-204ENST00000528824 CFAP70Q5T0N1 1121 aa11.35□□□□□ -0.59
SNX7-204ENST00000528824 DLC1Q96QB1 1528 aa11.34□□□□□ -0.59
SNX7-204ENST00000528824 KIAA0232Q92628 1395 aa11.34□□□□□ -0.59
SNX7-204ENST00000528824 SENP3-EIF4A1A0A087X0R7 540 aa11.34□□□□□ -0.59
SNX7-204ENST00000528824 WASLO00401 505 aaPredicted RBP11.33□□□□□ -0.6
SNX7-204ENST00000528824 PLSCR1O15162 318 aa11.33□□□□□ -0.6
SNX7-204ENST00000528824 MPHOSPH9Q99550 1183 aa11.33□□□□□ -0.6
SNX7-204ENST00000528824 ZC3H6P61129 1189 aaKnown RBP11.33□□□□□ -0.6
SNX7-204ENST00000528824 CHRNA2Q15822 529 aa11.33□□□□□ -0.6
SNX7-204ENST00000528824 ALS2Q96Q42 1657 aa11.32□□□□□ -0.6
SNX7-204ENST00000528824 FXR2P51116 673 aaKnown RBP eCLIP11.32□□□□□ -0.6
SNX7-204ENST00000528824 PPARGC1BQ86YN6 1023 aaKnown RBP11.32□□□□□ -0.6
SNX7-204ENST00000528824 ZNF784Q8NCA9 323 aaPredicted RBP11.32□□□□□ -0.6
SNX7-204ENST00000528824 STAC3Q96MF2 364 aa11.32□□□□□ -0.6
SNX7-204ENST00000528824 HIRIP3Q9BW71 556 aaPredicted RBP11.32□□□□□ -0.6
SNX7-204ENST00000528824 TULP4Q9NRJ4 1543 aa11.32□□□□□ -0.6
SNX7-204ENST00000528824 ATP7BP35670 1465 aa11.32□□□□□ -0.6
SNX7-204ENST00000528824 TRPM3Q9HCF6 1732 aaPredicted RBP11.31□□□□□ -0.6
SNX7-204ENST00000528824 RREB1Q92766 1687 aa11.31□□□□□ -0.6
SNX7-204ENST00000528824 MINK1Q8N4C8 1332 aaPredicted RBP11.31□□□□□ -0.6
SNX7-204ENST00000528824 BCL11BQ9C0K0 894 aaPredicted RBP11.31□□□□□ -0.6
SNX7-204ENST00000528824 TRAK1Q9UPV9 953 aa11.31□□□□□ -0.6
SNX7-204ENST00000528824 SSH2Q76I76 1423 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms