RNA–Protein interactions for RNA: ENST00000527962.5

CTTN-212, Transcript of cortactin, humanhuman

TSL 2

Gene CTTN, Length 587 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTN-212ENST00000527962 PLCH1Q4KWH8 1693 aa22.97■■□□□ 1.27
CTTN-212ENST00000527962 PRDM11Q9NQV5 511 aa22.97■■□□□ 1.27
CTTN-212ENST00000527962 NUDT16Q96DE0 195 aaKnown RBP22.94■■□□□ 1.26
CTTN-212ENST00000527962 SPATA31A5Q5VU36 1347 aa22.93■■□□□ 1.26
CTTN-212ENST00000527962 SPATA31A7Q8IWB4 1347 aa22.93■■□□□ 1.26
CTTN-212ENST00000527962 ABCA3Q99758 1704 aa22.92■■□□□ 1.26
CTTN-212ENST00000527962 BRWD3Q6RI45 1802 aa22.92■■□□□ 1.26
CTTN-212ENST00000527962 COL14A1Q05707 1796 aaKnown RBP22.91■■□□□ 1.26
CTTN-212ENST00000527962 TRPM3Q9HCF6 1732 aaPredicted RBP22.89■■□□□ 1.26
CTTN-212ENST00000527962 CDK19Q9BWU1 502 aa22.89■■□□□ 1.25
CTTN-212ENST00000527962 CCDC61Q9Y6R9 512 aa22.88■■□□□ 1.25
CTTN-212ENST00000527962 ALS2Q96Q42 1657 aa22.87■■□□□ 1.25
CTTN-212ENST00000527962 EVA1CP58658 441 aa22.86■■□□□ 1.25
CTTN-212ENST00000527962 KIAA0232Q92628 1395 aa22.86■■□□□ 1.25
CTTN-212ENST00000527962 ATP7BP35670 1465 aa22.85■■□□□ 1.25
CTTN-212ENST00000527962 STRN4Q9NRL3 753 aa22.85■■□□□ 1.25
CTTN-212ENST00000527962 SPATA31A1Q5TZJ5 1347 aa22.84■■□□□ 1.25
CTTN-212ENST00000527962 ZC3H6P61129 1189 aaKnown RBP22.84■■□□□ 1.25
CTTN-212ENST00000527962 EN1Q05925 392 aaPredicted RBP22.84■■□□□ 1.25
CTTN-212ENST00000527962 NBPF8Q3BBV2 869 aa22.84■■□□□ 1.25
CTTN-212ENST00000527962 FAM196AQ6ZSG2 479 aa22.84■■□□□ 1.25
CTTN-212ENST00000527962 NRAPQ86VF7 1730 aa22.84■■□□□ 1.25
CTTN-212ENST00000527962 ACEP12821 1306 aa22.83■■□□□ 1.25
CTTN-212ENST00000527962 CHRNA2Q15822 529 aa22.83■■□□□ 1.25
CTTN-212ENST00000527962 PLEKHG3A1L390 1219 aa22.82■■□□□ 1.24
CTTN-212ENST00000527962 PSDA5PKW4 1024 aaPredicted RBP22.82■■□□□ 1.24
CTTN-212ENST00000527962 FAM182BQ5T319 152 aa22.82■■□□□ 1.24
CTTN-212ENST00000527962 NUTM2GQ5VZR2 741 aa22.82■■□□□ 1.24
CTTN-212ENST00000527962 ABTB2Q8N961 1025 aa22.82■■□□□ 1.24
CTTN-212ENST00000527962 POLR3AO14802 1390 aaPredicted RBP22.81■■□□□ 1.24
CTTN-212ENST00000527962 ITSN1Q15811 1721 aa22.8■■□□□ 1.24
CTTN-212ENST00000527962 PDE3BQ13370 1112 aa22.8■■□□□ 1.24
CTTN-212ENST00000527962 USP35Q9P2H5 1018 aa22.79■■□□□ 1.24
CTTN-212ENST00000527962 SRPK2P78362 688 aaKnown RBP22.78■■□□□ 1.24
CTTN-212ENST00000527962 BARGINQ6ZT62 677 aa22.78■■□□□ 1.24
CTTN-212ENST00000527962 NLRP13Q86W25 1043 aa22.78■■□□□ 1.24
CTTN-212ENST00000527962 DISP2A7MBM2 1401 aa22.77■■□□□ 1.24
CTTN-212ENST00000527962 ARHGEF28Q8N1W1 1705 aaKnown RBP22.77■■□□□ 1.23
CTTN-212ENST00000527962 TRIM37O94972 964 aa22.76■■□□□ 1.23
CTTN-212ENST00000527962 RGPD1P0DJD0 1748 aa22.74■■□□□ 1.23
CTTN-212ENST00000527962 APBA3O96018 575 aa22.74■■□□□ 1.23
CTTN-212ENST00000527962 R3HDM1Q15032 1099 aaKnown RBP22.74■■□□□ 1.23
CTTN-212ENST00000527962 TCP11L2Q8N4U5 519 aa22.74■■□□□ 1.23
CTTN-212ENST00000527962 CENPJQ9HC77 1338 aaPredicted RBP22.74■■□□□ 1.23
CTTN-212ENST00000527962 LRP5O75197 1615 aa22.74■■□□□ 1.23
CTTN-212ENST00000527962 THSD7AQ9UPZ6 1657 aa22.74■■□□□ 1.23
CTTN-212ENST00000527962 PARD3Q8TEW0 1356 aa22.74■■□□□ 1.23
CTTN-212ENST00000527962 C11orf95C9JLR9 678 aaPredicted RBP22.73■■□□□ 1.23
CTTN-212ENST00000527962 EZH2Q15910 746 aaKnown RBP22.73■■□□□ 1.23
CTTN-212ENST00000527962 NBPF1Q3BBV0 1214 aa22.73■■□□□ 1.23
CTTN-212ENST00000527962 THRAP3Q9Y2W1 955 aaKnown RBP22.73■■□□□ 1.23
CTTN-212ENST00000527962 CRYBG1Q9Y4K1 1723 aa22.73■■□□□ 1.23
CTTN-212ENST00000527962 BRD4O60885 1362 aaPredicted RBP22.73■■□□□ 1.23
CTTN-212ENST00000527962 CPDO75976 1380 aa22.73■■□□□ 1.23
CTTN-212ENST00000527962 SSH2Q76I76 1423 aa22.73■■□□□ 1.23
CTTN-212ENST00000527962 GCP02774 474 aa22.71■■□□□ 1.23
CTTN-212ENST00000527962 LARP1Q6PKG0 1096 aaKnown RBP22.71■■□□□ 1.23
CTTN-212ENST00000527962 CAMKK2Q96RR4 588 aa22.71■■□□□ 1.23
CTTN-212ENST00000527962 USP19O94966 1318 aa22.7■■□□□ 1.22
CTTN-212ENST00000527962 PPIP5K1Q6PFW1 1433 aa22.7■■□□□ 1.22
CTTN-212ENST00000527962 KIAA1210Q9ULL0 1709 aa22.69■■□□□ 1.22
CTTN-212ENST00000527962 NBPF14Q5TI25 921 aa22.69■■□□□ 1.22
CTTN-212ENST00000527962 CABP2Q9NPB3 220 aa22.69■■□□□ 1.22
CTTN-212ENST00000527962 PHRF1Q9P1Y6 1649 aaKnown RBP22.68■■□□□ 1.22
CTTN-212ENST00000527962 TOPAZ1Q8N9V7 1692 aa22.65■■□□□ 1.22
CTTN-212ENST00000527962 NLRP6P59044 892 aa22.65■■□□□ 1.22
CTTN-212ENST00000527962 CABP1Q9NZU7 370 aa22.65■■□□□ 1.22
CTTN-212ENST00000527962 CAMTA1Q9Y6Y1 1673 aa22.65■■□□□ 1.22
CTTN-212ENST00000527962 ZBTB7CA1YPR0 619 aa22.64■■□□□ 1.21
CTTN-212ENST00000527962 NRKQ7Z2Y5 1582 aa22.63■■□□□ 1.21
CTTN-212ENST00000527962 EVC2Q86UK5 1308 aa22.62■■□□□ 1.21
CTTN-212ENST00000527962 TNS1Q9HBL0 1735 aaKnown RBP22.6■■□□□ 1.21
CTTN-212ENST00000527962 CRB1P82279 1406 aa22.6■■□□□ 1.21
CTTN-212ENST00000527962 ZNF692Q9BU19 519 aaPredicted RBP22.6■■□□□ 1.21
CTTN-212ENST00000527962 AATKQ6ZMQ8 1374 aa22.6■■□□□ 1.21
CTTN-212ENST00000527962 USP6P35125 1406 aa22.59■■□□□ 1.21
CTTN-212ENST00000527962 TOM1L2Q6ZVM7 507 aa22.59■■□□□ 1.21
CTTN-212ENST00000527962 COL5A2P05997 1499 aaPredicted RBP22.59■■□□□ 1.21
CTTN-212ENST00000527962 L3MBTL2Q969R5 705 aa22.58■■□□□ 1.21
CTTN-212ENST00000527962 DDB1Q16531 1140 aa22.57■■□□□ 1.2
CTTN-212ENST00000527962 KCNH5Q8NCM2 988 aa22.57■■□□□ 1.2
CTTN-212ENST00000527962 CDCA7Q9BWT1 371 aaPredicted RBP22.57■■□□□ 1.2
CTTN-212ENST00000527962 LMO7Q8WWI1 1683 aa22.56■■□□□ 1.2
CTTN-212ENST00000527962 OVOS2A0A0G2JMS6 1433 aa22.55■■□□□ 1.2
CTTN-212ENST00000527962 OVOS2A0A0J9YW53 1432 aa22.55■■□□□ 1.2
CTTN-212ENST00000527962 OVOS2Q6IE36 1432 aa22.55■■□□□ 1.2
CTTN-212ENST00000527962 DCAF8L1A6NGE4 600 aa22.52■■□□□ 1.2
CTTN-212ENST00000527962 SPON1Q9HCB6 807 aa22.52■■□□□ 1.2
CTTN-212ENST00000527962 PPP1R1BQ9UD71 204 aaPredicted RBP22.52■■□□□ 1.2
CTTN-212ENST00000527962 WDR17Q8IZU2 1322 aa22.52■■□□□ 1.2
CTTN-212ENST00000527962 ROCK2O75116 1388 aaKnown RBP22.51■■□□□ 1.19
CTTN-212ENST00000527962 PLSCR1O15162 318 aa22.51■■□□□ 1.19
CTTN-212ENST00000527962 CSB-PGBD3P0DP91 1061 aa22.51■■□□□ 1.19
CTTN-212ENST00000527962 TTC21AQ8NDW8 1320 aa22.51■■□□□ 1.19
CTTN-212ENST00000527962 QRICH2Q9H0J4 1663 aa22.5■■□□□ 1.19
CTTN-212ENST00000527962 BCL11BQ9C0K0 894 aaPredicted RBP22.5■■□□□ 1.19
CTTN-212ENST00000527962 TTC21BQ7Z4L5 1316 aa22.5■■□□□ 1.19
CTTN-212ENST00000527962 SLIT3O75094 1523 aa22.49■■□□□ 1.19
CTTN-212ENST00000527962 ARHGEF25Q86VW2 580 aa22.49■■□□□ 1.19
CTTN-212ENST00000527962 NEUROD1Q13562 356 aa22.48■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 76.8 ms