RNA–Protein interactions for RNA: ENST00000527952.1

PTPRJ-205, Transcript of protein tyrosine phosphatase, receptor type J, humanhuman

TSL 5

Gene PTPRJ, Length 626 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRJ-205ENST00000527952 BLMP54132 1417 aaPredicted RBP35.05■■■■□ 3.2
PTPRJ-205ENST00000527952 ONECUT3O60422 494 aaPredicted RBP35.03■■■■□ 3.2
PTPRJ-205ENST00000527952 KRT27Q7Z3Y8 459 aa35.03■■■■□ 3.2
PTPRJ-205ENST00000527952 NUDT16Q96DE0 195 aaKnown RBP35.03■■■■□ 3.2
PTPRJ-205ENST00000527952 FAM98CQ17RN3 349 aaKnown RBP35.02■■■■□ 3.2
PTPRJ-205ENST00000527952 COL14A1Q05707 1796 aaKnown RBP35■■■■□ 3.19
PTPRJ-205ENST00000527952 ATP7BP35670 1465 aa35■■■■□ 3.19
PTPRJ-205ENST00000527952 ITSN1Q15811 1721 aa34.99■■■■□ 3.19
PTPRJ-205ENST00000527952 CRYBG1Q9Y4K1 1723 aa34.99■■■■□ 3.19
PTPRJ-205ENST00000527952 CDK19Q9BWU1 502 aa34.99■■■■□ 3.19
PTPRJ-205ENST00000527952 SRCAPQ6ZRS2 3230 aa34.98■■■■□ 3.19
PTPRJ-205ENST00000527952 SF3B2Q13435 895 aaKnown RBP34.97■■■■□ 3.19
PTPRJ-205ENST00000527952 NUTM2GQ5VZR2 741 aa34.96■■■■□ 3.19
PTPRJ-205ENST00000527952 NBPF1Q3BBV0 1214 aa34.95■■■■□ 3.19
PTPRJ-205ENST00000527952 PRDM11Q9NQV5 511 aa34.93■■■■□ 3.18
PTPRJ-205ENST00000527952 CHRNA2Q15822 529 aa34.91■■■■□ 3.18
PTPRJ-205ENST00000527952 FAM182BQ5T319 152 aa34.91■■■■□ 3.18
PTPRJ-205ENST00000527952 KIAA0232Q92628 1395 aa34.88■■■■□ 3.17
PTPRJ-205ENST00000527952 ACEP12821 1306 aa34.88■■■■□ 3.17
PTPRJ-205ENST00000527952 SPATA31A5Q5VU36 1347 aa34.88■■■■□ 3.17
PTPRJ-205ENST00000527952 SPATA31A7Q8IWB4 1347 aa34.88■■■■□ 3.17
PTPRJ-205ENST00000527952 ZC3H6P61129 1189 aaKnown RBP34.88■■■■□ 3.17
PTPRJ-205ENST00000527952 KIAA1210Q9ULL0 1709 aa34.88■■■■□ 3.17
PTPRJ-205ENST00000527952 TOPAZ1Q8N9V7 1692 aa34.86■■■■□ 3.17
PTPRJ-205ENST00000527952 PHRF1Q9P1Y6 1649 aaKnown RBP34.86■■■■□ 3.17
PTPRJ-205ENST00000527952 NBPF8Q3BBV2 869 aa34.86■■■■□ 3.17
PTPRJ-205ENST00000527952 STRN4Q9NRL3 753 aa34.85■■■■□ 3.17
PTPRJ-205ENST00000527952 CCDC61Q9Y6R9 512 aa34.84■■■■□ 3.17
PTPRJ-205ENST00000527952 POLR3AO14802 1390 aaPredicted RBP34.82■■■■□ 3.16
PTPRJ-205ENST00000527952 PLEKHG3A1L390 1219 aa34.79■■■■□ 3.16
PTPRJ-205ENST00000527952 BAG6P46379 1132 aa34.78■■■■□ 3.16
PTPRJ-205ENST00000527952 SRPK2P78362 688 aaKnown RBP34.78■■■■□ 3.16
PTPRJ-205ENST00000527952 CABP2Q9NPB3 220 aa34.78■■■■□ 3.16
PTPRJ-205ENST00000527952 THSD7AQ9UPZ6 1657 aa34.77■■■■□ 3.16
PTPRJ-205ENST00000527952 ABTB2Q8N961 1025 aa34.76■■■■□ 3.16
PTPRJ-205ENST00000527952 USP35Q9P2H5 1018 aa34.76■■■■□ 3.16
PTPRJ-205ENST00000527952 SPATA31A1Q5TZJ5 1347 aa34.76■■■■□ 3.15
PTPRJ-205ENST00000527952 CENPJQ9HC77 1338 aaPredicted RBP34.75■■■■□ 3.15
PTPRJ-205ENST00000527952 PSDA5PKW4 1024 aaPredicted RBP34.74■■■■□ 3.15
PTPRJ-205ENST00000527952 EN1Q05925 392 aaPredicted RBP34.74■■■■□ 3.15
PTPRJ-205ENST00000527952 PPIP5K1Q6PFW1 1433 aa34.72■■■■□ 3.15
PTPRJ-205ENST00000527952 EVA1CP58658 441 aa34.71■■■■□ 3.15
PTPRJ-205ENST00000527952 RGPD1P0DJD0 1748 aa34.71■■■■□ 3.15
PTPRJ-205ENST00000527952 NRKQ7Z2Y5 1582 aa34.7■■■■□ 3.15
PTPRJ-205ENST00000527952 QRICH2Q9H0J4 1663 aa34.7■■■■□ 3.15
PTPRJ-205ENST00000527952 L3MBTL2Q969R5 705 aa34.69■■■■□ 3.14
PTPRJ-205ENST00000527952 SIN3AQ96ST3 1273 aa34.68■■■■□ 3.14
PTPRJ-205ENST00000527952 CAMTA1Q9Y6Y1 1673 aa34.66■■■■□ 3.14
PTPRJ-205ENST00000527952 LARP1Q6PKG0 1096 aaKnown RBP34.66■■■■□ 3.14
PTPRJ-205ENST00000527952 SSH2Q76I76 1423 aa34.65■■■■□ 3.14
PTPRJ-205ENST00000527952 TNS1Q9HBL0 1735 aaKnown RBP34.64■■■■□ 3.14
PTPRJ-205ENST00000527952 USP19O94966 1318 aa34.64■■■■□ 3.14
PTPRJ-205ENST00000527952 CABP1Q9NZU7 370 aa34.64■■■■□ 3.14
PTPRJ-205ENST00000527952 ZBTB7CA1YPR0 619 aa34.63■■■■□ 3.13
PTPRJ-205ENST00000527952 NLRP13Q86W25 1043 aa34.63■■■■□ 3.13
PTPRJ-205ENST00000527952 TRIM37O94972 964 aa34.62■■■■□ 3.13
PTPRJ-205ENST00000527952 GCP02774 474 aa34.61■■■■□ 3.13
PTPRJ-205ENST00000527952 NEUROD1Q13562 356 aa34.61■■■■□ 3.13
PTPRJ-205ENST00000527952 LMO7Q8WWI1 1683 aa34.6■■■■□ 3.13
PTPRJ-205ENST00000527952 EZH2Q15910 746 aaKnown RBP34.6■■■■□ 3.13
PTPRJ-205ENST00000527952 CPDO75976 1380 aa34.59■■■■□ 3.13
PTPRJ-205ENST00000527952 FAM196AQ6ZSG2 479 aa34.58■■■■□ 3.13
PTPRJ-205ENST00000527952 BARGINQ6ZT62 677 aa34.56■■■■□ 3.12
PTPRJ-205ENST00000527952 NLRP6P59044 892 aa34.55■■■■□ 3.12
PTPRJ-205ENST00000527952 PDE3BQ13370 1112 aa34.55■■■■□ 3.12
PTPRJ-205ENST00000527952 R3HDM1Q15032 1099 aaKnown RBP34.55■■■■□ 3.12
PTPRJ-205ENST00000527952 TCP11L2Q8N4U5 519 aa34.55■■■■□ 3.12
PTPRJ-205ENST00000527952 TRPM1Q7Z4N2 1603 aa34.55■■■■□ 3.12
PTPRJ-205ENST00000527952 USP6P35125 1406 aa34.54■■■■□ 3.12
PTPRJ-205ENST00000527952 LRP5O75197 1615 aa34.53■■■■□ 3.12
PTPRJ-205ENST00000527952 APBA3O96018 575 aa34.52■■■■□ 3.12
PTPRJ-205ENST00000527952 DISP2A7MBM2 1401 aa34.52■■■■□ 3.12
PTPRJ-205ENST00000527952 CAMKK2Q96RR4 588 aa34.51■■■■□ 3.12
PTPRJ-205ENST00000527952 COL5A2P05997 1499 aaPredicted RBP34.5■■■■□ 3.11
PTPRJ-205ENST00000527952 EVC2Q86UK5 1308 aa34.5■■■■□ 3.11
PTPRJ-205ENST00000527952 ROCK2O75116 1388 aaKnown RBP34.48■■■■□ 3.11
PTPRJ-205ENST00000527952 BRD4O60885 1362 aaPredicted RBP34.47■■■■□ 3.11
PTPRJ-205ENST00000527952 PIK3C2AO00443 1686 aa34.46■■■■□ 3.11
PTPRJ-205ENST00000527952 SLIT3O75094 1523 aa34.45■■■■□ 3.1
PTPRJ-205ENST00000527952 THRAP3Q9Y2W1 955 aaKnown RBP34.43■■■■□ 3.1
PTPRJ-205ENST00000527952 SOX12O15370 315 aa34.42■■■■□ 3.1
PTPRJ-205ENST00000527952 CRB1P82279 1406 aa34.41■■■■□ 3.1
PTPRJ-205ENST00000527952 PARP4Q9UKK3 1724 aaKnown RBP34.4■■■■□ 3.1
PTPRJ-205ENST00000527952 AATKQ6ZMQ8 1374 aa34.39■■■■□ 3.1
PTPRJ-205ENST00000527952 TTC21BQ7Z4L5 1316 aa34.39■■■■□ 3.1
PTPRJ-205ENST00000527952 AXIN2Q9Y2T1 843 aa34.39■■■■□ 3.1
PTPRJ-205ENST00000527952 COL18A1P39060 1754 aa34.39■■■■□ 3.1
PTPRJ-205ENST00000527952 TOM1L2Q6ZVM7 507 aa34.38■■■■□ 3.09
PTPRJ-205ENST00000527952 AKAP12Q02952 1782 aa34.38■■■■□ 3.09
PTPRJ-205ENST00000527952 RGPD5Q99666 1765 aa34.36■■■■□ 3.09
PTPRJ-205ENST00000527952 RREB1Q92766 1687 aa34.35■■■■□ 3.09
PTPRJ-205ENST00000527952 NUP188Q5SRE5 1749 aa34.34■■■■□ 3.09
PTPRJ-205ENST00000527952 ZNF692Q9BU19 519 aaPredicted RBP34.33■■■■□ 3.09
PTPRJ-205ENST00000527952 PARD3Q8TEW0 1356 aa34.32■■■■□ 3.08
PTPRJ-205ENST00000527952 CPSF1Q10570 1443 aaKnown RBP34.3■■■■□ 3.08
PTPRJ-205ENST00000527952 LRRC37A3O60309 1634 aa34.3■■■■□ 3.08
PTPRJ-205ENST00000527952 ARHGEF25Q86VW2 580 aa34.3■■■■□ 3.08
PTPRJ-205ENST00000527952 KTN1Q86UP2 1357 aaKnown RBP34.29■■■■□ 3.08
PTPRJ-205ENST00000527952 DDB1Q16531 1140 aa34.29■■■■□ 3.08
PTPRJ-205ENST00000527952 WDR17Q8IZU2 1322 aa34.29■■■■□ 3.08
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms