RNA–Protein interactions for RNA: ENST00000527881.1

TSKU-203, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSKU, Length 3,554 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-203ENST00000527881 SSH1Q8WYL5 1049 aa15.33■□□□□ 0.04
TSKU-203ENST00000527881 PDCL2Q8N4E4 241 aa15.33■□□□□ 0.04
TSKU-203ENST00000527881 GPT2Q8TD30 523 aa15.32■□□□□ 0.04
TSKU-203ENST00000527881 C1orf115Q9H7X2 142 aa15.32■□□□□ 0.04
TSKU-203ENST00000527881 TMEM63CQ9P1W3 806 aa15.32■□□□□ 0.04
TSKU-203ENST00000527881 VGLL3A8MV65 326 aa15.32■□□□□ 0.04
TSKU-203ENST00000527881 CHAF1AQ13111 956 aaPredicted RBP15.32■□□□□ 0.04
TSKU-203ENST00000527881 EIF4G3O43432 1585 aaKnown RBP15.32■□□□□ 0.04
TSKU-203ENST00000527881 GTF2E1P29083 439 aaPredicted RBP15.31■□□□□ 0.04
TSKU-203ENST00000527881 MAPK8IP2Q13387 824 aaPredicted RBP15.31■□□□□ 0.04
TSKU-203ENST00000527881 ATP2B3Q16720 1220 aa15.31■□□□□ 0.04
TSKU-203ENST00000527881 NAP1L2Q9ULW6 460 aaPredicted RBP15.31■□□□□ 0.04
TSKU-203ENST00000527881 TSPY26PQ9H489 355 aa15.31■□□□□ 0.04
TSKU-203ENST00000527881 SCAPERQ9BY12 1400 aa15.3■□□□□ 0.04
TSKU-203ENST00000527881 U2SURPO15042 1029 aaKnown RBP15.3■□□□□ 0.04
TSKU-203ENST00000527881 RABEP1Q15276 862 aa15.3■□□□□ 0.04
TSKU-203ENST00000527881 PRIMPOLQ96LW4 560 aa15.3■□□□□ 0.04
TSKU-203ENST00000527881 IPO8O15397 1037 aaKnown RBP15.3■□□□□ 0.04
TSKU-203ENST00000527881 STAC3Q96MF2 364 aa15.3■□□□□ 0.04
TSKU-203ENST00000527881 CDC45O75419 566 aa15.3■□□□□ 0.04
TSKU-203ENST00000527881 ZGPATQ8N5A5 531 aaKnown RBP15.3■□□□□ 0.04
TSKU-203ENST00000527881 CARD14Q9BXL6 1004 aa15.3■□□□□ 0.04
TSKU-203ENST00000527881 MTHFSP49914 203 aa15.29■□□□□ 0.04
TSKU-203ENST00000527881 NOLC1Q14978 699 aaKnown RBP eCLIP15.29■□□□□ 0.04
TSKU-203ENST00000527881 TTC12Q9H892 705 aaPredicted RBP15.29■□□□□ 0.04
TSKU-203ENST00000527881 AK9Q5TCS8 1911 aa15.29■□□□□ 0.04
TSKU-203ENST00000527881 URB2Q14146 1524 aaKnown RBP15.29■□□□□ 0.04
TSKU-203ENST00000527881 ZNF710Q8N1W2 664 aa15.29■□□□□ 0.04
TSKU-203ENST00000527881 ST18O60284 1047 aa15.28■□□□□ 0.04
TSKU-203ENST00000527881 CLEC17AQ6ZS10 378 aa15.28■□□□□ 0.04
TSKU-203ENST00000527881 NSFL1CQ9UNZ2 370 aaKnown RBP15.28■□□□□ 0.04
TSKU-203ENST00000527881 ITSN2Q9NZM3 1697 aa15.27■□□□□ 0.04
TSKU-203ENST00000527881 U2AF2P26368 475 aaKnown RBP eCLIP15.27■□□□□ 0.04
TSKU-203ENST00000527881 NOL8Q76FK4 1167 aaKnown RBP15.27■□□□□ 0.04
TSKU-203ENST00000527881 SYAP1Q96A49 352 aaPredicted RBP15.27■□□□□ 0.04
TSKU-203ENST00000527881 FBLN2P98095 1184 aa15.27■□□□□ 0.03
TSKU-203ENST00000527881 ZBTB40Q9NUA8 1239 aa15.27■□□□□ 0.03
TSKU-203ENST00000527881 USP25Q9UHP3 1055 aa15.27■□□□□ 0.03
TSKU-203ENST00000527881 MBD3O95983 291 aa15.26■□□□□ 0.03
TSKU-203ENST00000527881 BCL2L12Q9HB09 334 aa15.26■□□□□ 0.03
TSKU-203ENST00000527881 NPC1L1Q9UHC9 1359 aa15.26■□□□□ 0.03
TSKU-203ENST00000527881 PLXNC1O60486 1568 aa15.25■□□□□ 0.03
TSKU-203ENST00000527881 APBB1O00213 710 aa15.25■□□□□ 0.03
TSKU-203ENST00000527881 PLCD3Q8N3E9 789 aa15.25■□□□□ 0.03
TSKU-203ENST00000527881 CWC22Q9HCG8 908 aaKnown RBP15.25■□□□□ 0.03
TSKU-203ENST00000527881 PTPRGP23470 1445 aa15.24■□□□□ 0.03
TSKU-203ENST00000527881 POLR3AO14802 1390 aaPredicted RBP15.24■□□□□ 0.03
TSKU-203ENST00000527881 PLB1Q6P1J6 1458 aa15.24■□□□□ 0.03
TSKU-203ENST00000527881 PIBF1Q8WXW3 757 aa15.24■□□□□ 0.03
TSKU-203ENST00000527881 RAPGEF6Q8TEU7 1601 aa15.23■□□□□ 0.03
TSKU-203ENST00000527881 ZBTB22O15209 634 aa15.23■□□□□ 0.03
TSKU-203ENST00000527881 EIF2AK4Q9P2K8 1649 aaKnown RBP15.23■□□□□ 0.03
TSKU-203ENST00000527881 PLA2R1Q13018 1463 aa15.23■□□□□ 0.03
TSKU-203ENST00000527881 CCDC141Q6ZP82 1450 aa15.23■□□□□ 0.03
TSKU-203ENST00000527881 NUP160Q12769 1436 aa15.23■□□□□ 0.03
TSKU-203ENST00000527881 DIAPH3Q9NSV4 1193 aa15.23■□□□□ 0.03
TSKU-203ENST00000527881 CASC1Q6TDU7 716 aa15.22■□□□□ 0.03
TSKU-203ENST00000527881 GDPD2Q9HCC8 539 aa15.22■□□□□ 0.03
TSKU-203ENST00000527881 PHF14O94880 888 aa15.22■□□□□ 0.03
TSKU-203ENST00000527881 GCC1Q96CN9 775 aa15.21■□□□□ 0.03
TSKU-203ENST00000527881 PDIA4P13667 645 aaKnown RBP15.21■□□□□ 0.03
TSKU-203ENST00000527881 CROCC2H7BZ55 1655 aa15.21■□□□□ 0.03
TSKU-203ENST00000527881 ADCY5O95622 1261 aa15.21■□□□□ 0.02
TSKU-203ENST00000527881 TAF3Q5VWG9 929 aa15.2■□□□□ 0.02
TSKU-203ENST00000527881 SYNMO15061 1565 aa15.2■□□□□ 0.02
TSKU-203ENST00000527881 SCAF11Q99590 1463 aaKnown RBP15.2■□□□□ 0.02
TSKU-203ENST00000527881 CT47B1P0C2W7 299 aaPredicted RBP15.2■□□□□ 0.02
TSKU-203ENST00000527881 SLC12A5Q9H2X9 1139 aa15.2■□□□□ 0.02
TSKU-203ENST00000527881 CFAP70Q5T0N1 1121 aa15.19■□□□□ 0.02
TSKU-203ENST00000527881 CCDC27Q2M243 656 aa15.19■□□□□ 0.02
TSKU-203ENST00000527881 TMEM51Q9NW97 253 aa15.19■□□□□ 0.02
TSKU-203ENST00000527881 SHANK2Q9UPX8 1470 aa15.19■□□□□ 0.02
TSKU-203ENST00000527881 ADCY10Q96PN6 1610 aa15.19■□□□□ 0.02
TSKU-203ENST00000527881 RIOK3O14730 519 aaKnown RBP15.19■□□□□ 0.02
TSKU-203ENST00000527881 CYP2E1P05181 493 aaPredicted RBP15.19■□□□□ 0.02
TSKU-203ENST00000527881 KCNJ4P48050 445 aa15.19■□□□□ 0.02
TSKU-203ENST00000527881 SPC24Q8NBT2 197 aa15.19■□□□□ 0.02
TSKU-203ENST00000527881 ABCC10Q5T3U5 1492 aa15.18■□□□□ 0.02
TSKU-203ENST00000527881 NSD3Q9BZ95 1437 aa15.18■□□□□ 0.02
TSKU-203ENST00000527881 ELL2O00472 640 aaPredicted RBP15.18■□□□□ 0.02
TSKU-203ENST00000527881 INTS3Q68E01 1043 aaKnown RBP15.18■□□□□ 0.02
TSKU-203ENST00000527881 NEK4P51957 841 aa15.18■□□□□ 0.02
TSKU-203ENST00000527881 PHF23Q9BUL5 403 aaPredicted RBP15.18■□□□□ 0.02
TSKU-203ENST00000527881 ZDHHC9Q9Y397 364 aa15.18■□□□□ 0.02
TSKU-203ENST00000527881 HCLS1P14317 486 aaPredicted RBP15.16■□□□□ 0.02
TSKU-203ENST00000527881 LAMC1P11047 1609 aa15.16■□□□□ 0.02
TSKU-203ENST00000527881 DISP1Q96F81 1524 aa15.16■□□□□ 0.02
TSKU-203ENST00000527881 GTF2F1P35269 517 aaKnown RBP eCLIP15.15■□□□□ 0.02
TSKU-203ENST00000527881 CFAP44Q96MT7 982 aa15.15■□□□□ 0.02
TSKU-203ENST00000527881 GRIN2AQ12879 1464 aa15.15■□□□□ 0.02
TSKU-203ENST00000527881 FKBP5Q13451 457 aaPredicted RBP15.15■□□□□ 0.02
TSKU-203ENST00000527881 USP26Q9BXU7 913 aa15.15■□□□□ 0.02
TSKU-203ENST00000527881 KIAA0556O60303 1618 aa15.15■□□□□ 0.02
TSKU-203ENST00000527881 TMPOP42166 694 aaKnown RBP15.15■□□□□ 0.02
TSKU-203ENST00000527881 GSPT1P15170 499 aaKnown RBP15.14■□□□□ 0.01
TSKU-203ENST00000527881 FAM184AQ8NB25 1140 aa15.14■□□□□ 0.01
TSKU-203ENST00000527881 ERICH4A6NGS2 130 aa15.14■□□□□ 0.01
TSKU-203ENST00000527881 CHGAP10645 457 aaKnown RBP15.14■□□□□ 0.01
TSKU-203ENST00000527881 REC8O95072 547 aa15.13■□□□□ 0.01
TSKU-203ENST00000527881 C16orf71Q8IYS4 520 aaPredicted RBP15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms