RNA–Protein interactions for RNA: ENST00000527467.5

CTNND1-216, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,071 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-216ENST00000527467 SAFB2Q14151 953 aaKnown RBP eCLIP8.72□□□□□ -1.01
CTNND1-216ENST00000527467 RCAN3Q9UKA8 241 aa8.72□□□□□ -1.01
CTNND1-216ENST00000527467 ABCA5Q8WWZ7 1642 aa8.72□□□□□ -1.01
CTNND1-216ENST00000527467 SLC26A8Q96RN1 970 aa8.72□□□□□ -1.01
CTNND1-216ENST00000527467 CCDC141Q6ZP82 1450 aa8.72□□□□□ -1.01
CTNND1-216ENST00000527467 G3V3G9 751 aa8.72□□□□□ -1.01
CTNND1-216ENST00000527467 RRP9O43818 475 aaKnown RBP8.72□□□□□ -1.01
CTNND1-216ENST00000527467 RABEP1Q15276 862 aa8.72□□□□□ -1.01
CTNND1-216ENST00000527467 DCAF8Q5TAQ9 597 aa8.72□□□□□ -1.01
CTNND1-216ENST00000527467 DHX29Q7Z478 1369 aaKnown RBP8.72□□□□□ -1.01
CTNND1-216ENST00000527467 CC2D1BQ5T0F9 858 aaKnown RBP8.72□□□□□ -1.01
CTNND1-216ENST00000527467 ZFYVE27Q5T4F4 411 aa8.72□□□□□ -1.01
CTNND1-216ENST00000527467 KIAA0556O60303 1618 aa8.71□□□□□ -1.01
CTNND1-216ENST00000527467 CCER2I3L3R5 266 aa8.71□□□□□ -1.01
CTNND1-216ENST00000527467 EHBP1L1Q8N3D4 1523 aa8.71□□□□□ -1.01
CTNND1-216ENST00000527467 BICD2Q8TD16 824 aa8.71□□□□□ -1.01
CTNND1-216ENST00000527467 TCEAL9Q9UHQ7 104 aa8.71□□□□□ -1.01
CTNND1-216ENST00000527467 A2MP01023 1474 aa8.71□□□□□ -1.02
CTNND1-216ENST00000527467 CLGNO14967 610 aa8.71□□□□□ -1.02
CTNND1-216ENST00000527467 MCTP1Q6DN14 999 aa8.71□□□□□ -1.02
CTNND1-216ENST00000527467 MRE11P49959 708 aa8.71□□□□□ -1.02
CTNND1-216ENST00000527467 TRPC5Q9UL62 973 aaPredicted RBP8.71□□□□□ -1.02
CTNND1-216ENST00000527467 TSPOAP1O95153 1857 aa8.71□□□□□ -1.02
CTNND1-216ENST00000527467 VPS8Q8N3P4 1428 aa8.71□□□□□ -1.02
CTNND1-216ENST00000527467 ERLIN1O75477 346 aa8.71□□□□□ -1.02
CTNND1-216ENST00000527467 KCNA6P17658 529 aa8.71□□□□□ -1.02
CTNND1-216ENST00000527467 AMPHP49418 695 aa8.71□□□□□ -1.02
CTNND1-216ENST00000527467 RAPGEF6Q8TEU7 1601 aa8.7□□□□□ -1.02
CTNND1-216ENST00000527467 TICAM2Q86XR7 235 aa8.7□□□□□ -1.02
CTNND1-216ENST00000527467 TRIM29Q14134 588 aa8.7□□□□□ -1.02
CTNND1-216ENST00000527467 SYNE3Q6ZMZ3 975 aa8.7□□□□□ -1.02
CTNND1-216ENST00000527467 DHX37Q8IY37 1157 aaKnown RBP8.7□□□□□ -1.02
CTNND1-216ENST00000527467 CCDC144AA2RUR9 1427 aa8.7□□□□□ -1.02
CTNND1-216ENST00000527467 GPATCH11Q8N954 259 aa8.7□□□□□ -1.02
CTNND1-216ENST00000527467 CFAP43Q8NDM7 1665 aa8.7□□□□□ -1.02
CTNND1-216ENST00000527467 RBM10P98175 930 aaKnown RBP8.7□□□□□ -1.02
CTNND1-216ENST00000527467 FOXD4L6Q3SYB3 417 aaPredicted RBP8.7□□□□□ -1.02
CTNND1-216ENST00000527467 FOXD4L3Q6VB84 417 aaPredicted RBP8.7□□□□□ -1.02
CTNND1-216ENST00000527467 NLRP13Q86W25 1043 aa8.7□□□□□ -1.02
CTNND1-216ENST00000527467 KDM5BQ9UGL1 1544 aa8.69□□□□□ -1.02
CTNND1-216ENST00000527467 ATP10BO94823 1461 aa8.69□□□□□ -1.02
CTNND1-216ENST00000527467 RNF20Q5VTR2 975 aa8.69□□□□□ -1.02
CTNND1-216ENST00000527467 NAT10Q9H0A0 1025 aaKnown RBP8.69□□□□□ -1.02
CTNND1-216ENST00000527467 CFAP57Q96MR6 1250 aa8.69□□□□□ -1.02
CTNND1-216ENST00000527467 BCL11BQ9C0K0 894 aaPredicted RBP8.69□□□□□ -1.02
CTNND1-216ENST00000527467 CHMP5Q9NZZ3 219 aa8.69□□□□□ -1.02
CTNND1-216ENST00000527467 ROCK1Q13464 1354 aa8.69□□□□□ -1.02
CTNND1-216ENST00000527467 RBM25P49756 843 aaKnown RBP8.69□□□□□ -1.02
CTNND1-216ENST00000527467 CEP63Q96MT8 703 aa8.69□□□□□ -1.02
CTNND1-216ENST00000527467 CCDC146Q8IYE0 955 aa8.68□□□□□ -1.02
CTNND1-216ENST00000527467 IPO4Q8TEX9 1081 aaKnown RBP8.68□□□□□ -1.02
CTNND1-216ENST00000527467 CCDC175P0C221 793 aa8.68□□□□□ -1.02
CTNND1-216ENST00000527467 CAVIN1Q6NZI2 390 aaKnown RBP8.68□□□□□ -1.02
CTNND1-216ENST00000527467 ERCC6L2Q5T890 1561 aa8.68□□□□□ -1.02
CTNND1-216ENST00000527467 NUTM2FA1L443 756 aa8.68□□□□□ -1.02
CTNND1-216ENST00000527467 CCDC73Q6ZRK6 1079 aa8.68□□□□□ -1.02
CTNND1-216ENST00000527467 PPM1EQ8WY54 764 aa8.68□□□□□ -1.02
CTNND1-216ENST00000527467 SOX12O15370 315 aa8.68□□□□□ -1.02
CTNND1-216ENST00000527467 GTF2E1P29083 439 aaPredicted RBP8.68□□□□□ -1.02
CTNND1-216ENST00000527467 TAX1BP1Q86VP1 789 aa8.68□□□□□ -1.02
CTNND1-216ENST00000527467 PDILTQ8N807 584 aa8.68□□□□□ -1.02
CTNND1-216ENST00000527467 STRN4Q9NRL3 753 aa8.68□□□□□ -1.02
CTNND1-216ENST00000527467 NASPP49321 788 aaPredicted RBP8.67□□□□□ -1.02
CTNND1-216ENST00000527467 STK32BQ9NY57 414 aa8.67□□□□□ -1.02
CTNND1-216ENST00000527467 FAM161AQ3B820 660 aa8.67□□□□□ -1.02
CTNND1-216ENST00000527467 STK31Q9BXU1 1019 aa8.67□□□□□ -1.02
CTNND1-216ENST00000527467 PRXQ9BXM0 1461 aa8.67□□□□□ -1.02
CTNND1-216ENST00000527467 MIA2Q96PC5 1412 aa8.67□□□□□ -1.02
CTNND1-216ENST00000527467 KIAA1107Q9UPP5 1409 aa8.67□□□□□ -1.02
CTNND1-216ENST00000527467 GOLGA6L10A0A0M3HER8 536 aa8.66□□□□□ -1.02
CTNND1-216ENST00000527467 OLFM4Q6UX06 510 aa8.66□□□□□ -1.02
CTNND1-216ENST00000527467 SMARCE1Q969G3 411 aa8.66□□□□□ -1.02
CTNND1-216ENST00000527467 DHX8Q14562 1220 aaKnown RBP8.66□□□□□ -1.02
CTNND1-216ENST00000527467 DDX11Q96FC9 970 aa8.66□□□□□ -1.02
CTNND1-216ENST00000527467 ERICH4A6NGS2 130 aa8.66□□□□□ -1.02
CTNND1-216ENST00000527467 PAF1Q8N7H5 531 aa8.66□□□□□ -1.02
CTNND1-216ENST00000527467 DCAF11Q8TEB1 546 aa8.66□□□□□ -1.02
CTNND1-216ENST00000527467 RAPGEF4Q8WZA2 1011 aa8.66□□□□□ -1.02
CTNND1-216ENST00000527467 SYTL4Q96C24 671 aaPredicted RBP8.66□□□□□ -1.02
CTNND1-216ENST00000527467 CALCOCO1Q9P1Z2 691 aa8.66□□□□□ -1.02
CTNND1-216ENST00000527467 CHMP3Q9Y3E7 222 aa8.66□□□□□ -1.02
CTNND1-216ENST00000527467 RRBP1Q9P2E9 1410 aaKnown RBP8.66□□□□□ -1.02
CTNND1-216ENST00000527467 EPS15P42566 896 aa8.66□□□□□ -1.02
CTNND1-216ENST00000527467 LMOD3Q0VAK6 560 aa8.66□□□□□ -1.02
CTNND1-216ENST00000527467 TTLL5Q6EMB2 1281 aa8.66□□□□□ -1.02
CTNND1-216ENST00000527467 PDCL2Q8N4E4 241 aa8.66□□□□□ -1.02
CTNND1-216ENST00000527467 EVC2Q86UK5 1308 aa8.66□□□□□ -1.02
CTNND1-216ENST00000527467 NUCB2P80303 420 aa8.65□□□□□ -1.02
CTNND1-216ENST00000527467 SHTN1A0MZ66 631 aa8.65□□□□□ -1.02
CTNND1-216ENST00000527467 FAM107BQ9H098 131 aa8.65□□□□□ -1.02
CTNND1-216ENST00000527467 CCDC112Q8NEF3 446 aa8.65□□□□□ -1.02
CTNND1-216ENST00000527467 ZNF526Q8TF50 670 aaPredicted RBP8.65□□□□□ -1.02
CTNND1-216ENST00000527467 CCDC43Q96MW1 224 aaKnown RBP8.65□□□□□ -1.02
CTNND1-216ENST00000527467 AMOTL2Q9Y2J4 779 aa8.65□□□□□ -1.02
CTNND1-216ENST00000527467 NPHP4O75161 1426 aaPredicted RBP8.65□□□□□ -1.02
CTNND1-216ENST00000527467 STAMBPO95630 424 aa8.65□□□□□ -1.03
CTNND1-216ENST00000527467 SLC4A3P48751 1232 aa8.65□□□□□ -1.03
CTNND1-216ENST00000527467 TMF1P82094 1093 aa8.65□□□□□ -1.03
CTNND1-216ENST00000527467 SEPT6Q14141 434 aa8.65□□□□□ -1.03
CTNND1-216ENST00000527467 TOM1L2Q6ZVM7 507 aa8.65□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms