RNA–Protein interactions for RNA: ENST00000527237.1

TRIM3-205, Transcript of tripartite motif containing 3, humanhuman

TSL 1 (best)

Gene TRIM3, Length 339 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-205ENST00000527237 PIK3C2AO00443 1686 aa25.82■■□□□ 1.72
TRIM3-205ENST00000527237 SBNO2Q9Y2G9 1366 aa25.82■■□□□ 1.72
TRIM3-205ENST00000527237 COL14A1Q05707 1796 aaKnown RBP25.81■■□□□ 1.72
TRIM3-205ENST00000527237 EVC2Q86UK5 1308 aa25.81■■□□□ 1.72
TRIM3-205ENST00000527237 BCL9LQ86UU0 1499 aa25.8■■□□□ 1.72
TRIM3-205ENST00000527237 SLIT2O94813 1529 aa25.8■■□□□ 1.72
TRIM3-205ENST00000527237 PLEKHG3A1L390 1219 aa25.8■■□□□ 1.72
TRIM3-205ENST00000527237 CLSPNQ9HAW4 1339 aa25.8■■□□□ 1.72
TRIM3-205ENST00000527237 PAK3O75914 559 aaPredicted RBP25.79■■□□□ 1.72
TRIM3-205ENST00000527237 ATRNO75882 1429 aa25.79■■□□□ 1.72
TRIM3-205ENST00000527237 USP21Q9UK80 565 aa25.78■■□□□ 1.72
TRIM3-205ENST00000527237 RGS12O14924 1447 aa25.78■■□□□ 1.72
TRIM3-205ENST00000527237 GLI3P10071 1580 aa25.78■■□□□ 1.72
TRIM3-205ENST00000527237 HAP1P54257 671 aaPredicted RBP25.77■■□□□ 1.72
TRIM3-205ENST00000527237 FNBP4Q8N3X1 1017 aaPredicted RBP25.77■■□□□ 1.72
TRIM3-205ENST00000527237 CDK12Q9NYV4 1490 aaPredicted RBP25.77■■□□□ 1.72
TRIM3-205ENST00000527237 BRWD3Q6RI45 1802 aa25.75■■□□□ 1.71
TRIM3-205ENST00000527237 USP6P35125 1406 aa25.75■■□□□ 1.71
TRIM3-205ENST00000527237 QTRT2Q9H974 415 aaKnown RBP25.75■■□□□ 1.71
TRIM3-205ENST00000527237 CABP1Q9NZU7 370 aa25.74■■□□□ 1.71
TRIM3-205ENST00000527237 RXRBP28702 533 aa25.73■■□□□ 1.71
TRIM3-205ENST00000527237 NUTM2GQ5VZR2 741 aa25.73■■□□□ 1.71
TRIM3-205ENST00000527237 CCER1Q8TC90 406 aaPredicted RBP25.73■■□□□ 1.71
TRIM3-205ENST00000527237 ATAD2Q6PL18 1390 aa25.7■■□□□ 1.71
TRIM3-205ENST00000527237 USP47Q96K76 1375 aa25.69■■□□□ 1.7
TRIM3-205ENST00000527237 CD163L1Q9NR16 1453 aa25.69■■□□□ 1.7
TRIM3-205ENST00000527237 RBM6P78332 1123 aaKnown RBP25.69■■□□□ 1.7
TRIM3-205ENST00000527237 TRPC5Q9UL62 973 aaPredicted RBP25.69■■□□□ 1.7
TRIM3-205ENST00000527237 SSH2Q76I76 1423 aa25.69■■□□□ 1.7
TRIM3-205ENST00000527237 USP54Q70EL1 1684 aa25.68■■□□□ 1.7
TRIM3-205ENST00000527237 LMO7Q8WWI1 1683 aa25.68■■□□□ 1.7
TRIM3-205ENST00000527237 RGPD5Q99666 1765 aa25.67■■□□□ 1.7
TRIM3-205ENST00000527237 ST20-MTHFSA0A0A6YYL1 179 aa25.67■■□□□ 1.7
TRIM3-205ENST00000527237 CPSF1Q10570 1443 aaKnown RBP25.67■■□□□ 1.7
TRIM3-205ENST00000527237 TESK2Q96S53 571 aa25.67■■□□□ 1.7
TRIM3-205ENST00000527237 MYOM1P52179 1685 aa25.67■■□□□ 1.7
TRIM3-205ENST00000527237 SLIT3O75094 1523 aa25.66■■□□□ 1.7
TRIM3-205ENST00000527237 FAM83GA6ND36 823 aa25.65■■□□□ 1.7
TRIM3-205ENST00000527237 UNC5CLQ8IV45 518 aa25.64■■□□□ 1.7
TRIM3-205ENST00000527237 ABTB2Q8N961 1025 aa25.64■■□□□ 1.7
TRIM3-205ENST00000527237 TIMELESSQ9UNS1 1208 aa25.64■■□□□ 1.7
TRIM3-205ENST00000527237 USP19O94966 1318 aa25.63■■□□□ 1.69
TRIM3-205ENST00000527237 KIAA0232Q92628 1395 aa25.63■■□□□ 1.69
TRIM3-205ENST00000527237 BRD4O60885 1362 aaPredicted RBP25.62■■□□□ 1.69
TRIM3-205ENST00000527237 LTN1O94822 1766 aa25.61■■□□□ 1.69
TRIM3-205ENST00000527237 COL18A1P39060 1754 aa25.61■■□□□ 1.69
TRIM3-205ENST00000527237 KTN1Q86UP2 1357 aaKnown RBP25.59■■□□□ 1.69
TRIM3-205ENST00000527237 CHRNA2Q15822 529 aa25.58■■□□□ 1.69
TRIM3-205ENST00000527237 GJD4Q96KN9 370 aaPredicted RBP25.58■■□□□ 1.69
TRIM3-205ENST00000527237 PRDM11Q9NQV5 511 aa25.58■■□□□ 1.69
TRIM3-205ENST00000527237 BTG4Q9NY30 223 aa25.58■■□□□ 1.69
TRIM3-205ENST00000527237 ZC3H6P61129 1189 aaKnown RBP25.57■■□□□ 1.68
TRIM3-205ENST00000527237 CAMTA1Q9Y6Y1 1673 aa25.57■■□□□ 1.68
TRIM3-205ENST00000527237 TTC21BQ7Z4L5 1316 aa25.57■■□□□ 1.68
TRIM3-205ENST00000527237 A0A1W2PP64 1363 aa25.56■■□□□ 1.68
TRIM3-205ENST00000527237 NFAT5O94916 1531 aa25.55■■□□□ 1.68
TRIM3-205ENST00000527237 TMC1Q8TDI8 760 aa25.55■■□□□ 1.68
TRIM3-205ENST00000527237 SLC12A5Q9H2X9 1139 aa25.55■■□□□ 1.68
TRIM3-205ENST00000527237 KIF20BQ96Q89 1820 aa25.55■■□□□ 1.68
TRIM3-205ENST00000527237 WNK3Q9BYP7 1800 aa25.55■■□□□ 1.68
TRIM3-205ENST00000527237 THSD7AQ9UPZ6 1657 aa25.55■■□□□ 1.68
TRIM3-205ENST00000527237 VPS72Q15906 364 aa25.54■■□□□ 1.68
TRIM3-205ENST00000527237 NLRP13Q86W25 1043 aa25.54■■□□□ 1.68
TRIM3-205ENST00000527237 CPDO75976 1380 aa25.53■■□□□ 1.68
TRIM3-205ENST00000527237 EP400Q96L91 3159 aa25.52■■□□□ 1.68
TRIM3-205ENST00000527237 NLRP6P59044 892 aa25.52■■□□□ 1.68
TRIM3-205ENST00000527237 ZNF692Q9BU19 519 aaPredicted RBP25.52■■□□□ 1.68
TRIM3-205ENST00000527237 CCDC9Q9Y3X0 531 aaKnown RBP25.51■■□□□ 1.67
TRIM3-205ENST00000527237 TTC21AQ8NDW8 1320 aa25.51■■□□□ 1.67
TRIM3-205ENST00000527237 GCP02774 474 aa25.5■■□□□ 1.67
TRIM3-205ENST00000527237 EDC4Q6P2E9 1401 aaKnown RBP25.5■■□□□ 1.67
TRIM3-205ENST00000527237 SUGP2Q8IX01 1082 aaKnown RBP eCLIP25.49■■□□□ 1.67
TRIM3-205ENST00000527237 PUS7Q96PZ0 661 aaKnown RBP25.49■■□□□ 1.67
TRIM3-205ENST00000527237 ZRANB1Q9UGI0 708 aa25.49■■□□□ 1.67
TRIM3-205ENST00000527237 NINLQ9Y2I6 1382 aa25.47■■□□□ 1.67
TRIM3-205ENST00000527237 UPF1Q92900 1129 aaKnown RBP eCLIP25.47■■□□□ 1.67
TRIM3-205ENST00000527237 COL5A2P05997 1499 aaPredicted RBP25.47■■□□□ 1.67
TRIM3-205ENST00000527237 TMF1P82094 1093 aa25.46■■□□□ 1.67
TRIM3-205ENST00000527237 HDGFL2Q7Z4V5 671 aaPredicted RBP25.46■■□□□ 1.67
TRIM3-205ENST00000527237 NME9Q86XW9 330 aa25.46■■□□□ 1.67
TRIM3-205ENST00000527237 ZBTB7CA1YPR0 619 aa25.45■■□□□ 1.66
TRIM3-205ENST00000527237 STRN4Q9NRL3 753 aa25.45■■□□□ 1.66
TRIM3-205ENST00000527237 SPATA31A5Q5VU36 1347 aa25.44■■□□□ 1.66
TRIM3-205ENST00000527237 SPATA31A7Q8IWB4 1347 aa25.44■■□□□ 1.66
TRIM3-205ENST00000527237 SOX12O15370 315 aa25.44■■□□□ 1.66
TRIM3-205ENST00000527237 TERF2IPQ9NYB0 399 aa25.43■■□□□ 1.66
TRIM3-205ENST00000527237 OVOS2A0A0J9YW53 1432 aa25.43■■□□□ 1.66
TRIM3-205ENST00000527237 OVOS2Q6IE36 1432 aa25.43■■□□□ 1.66
TRIM3-205ENST00000527237 USP31Q70CQ4 1352 aa25.43■■□□□ 1.66
TRIM3-205ENST00000527237 ANKRD36BQ8N2N9 1353 aa25.42■■□□□ 1.66
TRIM3-205ENST00000527237 PARP4Q9UKK3 1724 aaKnown RBP25.41■■□□□ 1.66
TRIM3-205ENST00000527237 FAM98CQ17RN3 349 aaKnown RBP25.41■■□□□ 1.66
TRIM3-205ENST00000527237 SEPT12Q8IYM1 358 aa25.41■■□□□ 1.66
TRIM3-205ENST00000527237 SPATA31A1Q5TZJ5 1347 aa25.39■■□□□ 1.66
TRIM3-205ENST00000527237 SLC24A1O60721 1099 aa25.39■■□□□ 1.66
TRIM3-205ENST00000527237 AATKQ6ZMQ8 1374 aa25.39■■□□□ 1.65
TRIM3-205ENST00000527237 ABCC6O95255 1503 aa25.38■■□□□ 1.65
TRIM3-205ENST00000527237 LRRC37A3O60309 1634 aa25.37■■□□□ 1.65
TRIM3-205ENST00000527237 RGPD2P0DJD1 1756 aa25.37■■□□□ 1.65
TRIM3-205ENST00000527237 A0A0G2JS52 829 aa25.37■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms