RNA–Protein interactions for RNA: ENST00000526955.1

PKNOX2-202, Transcript of PBX/knotted 1 homeobox 2, humanhuman

TSL 1 (best)

Gene PKNOX2, Length 4,531 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX2-202ENST00000526955 MAGI2Q86UL8 1455 aa12.7□□□□□ -0.38
PKNOX2-202ENST00000526955 NASPP49321 788 aaPredicted RBP12.7□□□□□ -0.38
PKNOX2-202ENST00000526955 TXNDC2Q86VQ3 553 aa12.7□□□□□ -0.38
PKNOX2-202ENST00000526955 WDR7Q9Y4E6 1490 aa12.7□□□□□ -0.38
PKNOX2-202ENST00000526955 CDC42BPAQ5VT25 1732 aa12.69□□□□□ -0.38
PKNOX2-202ENST00000526955 SPINK5Q9NQ38 1064 aaPredicted RBP12.69□□□□□ -0.38
PKNOX2-202ENST00000526955 EVC2Q86UK5 1308 aa12.69□□□□□ -0.38
PKNOX2-202ENST00000526955 PTMAP06454 111 aaKnown RBP12.69□□□□□ -0.38
PKNOX2-202ENST00000526955 PCDHB15Q9Y5E8 787 aa12.69□□□□□ -0.38
PKNOX2-202ENST00000526955 CSPP1Q1MSJ5 1256 aa12.68□□□□□ -0.38
PKNOX2-202ENST00000526955 MTERF4Q7Z6M4 381 aaKnown RBP12.68□□□□□ -0.38
PKNOX2-202ENST00000526955 RAPGEF4Q8WZA2 1011 aa12.68□□□□□ -0.38
PKNOX2-202ENST00000526955 NUCB2P80303 420 aa12.68□□□□□ -0.38
PKNOX2-202ENST00000526955 CCDC27Q2M243 656 aa12.68□□□□□ -0.38
PKNOX2-202ENST00000526955 HMGB2P26583 209 aaKnown RBP12.68□□□□□ -0.38
PKNOX2-202ENST00000526955 ANKLE2Q86XL3 938 aa12.68□□□□□ -0.38
PKNOX2-202ENST00000526955 SNX21Q969T3 373 aa12.68□□□□□ -0.38
PKNOX2-202ENST00000526955 PIP4K2BP78356 416 aa12.67□□□□□ -0.38
PKNOX2-202ENST00000526955 PANK2Q9BZ23 570 aa12.67□□□□□ -0.38
PKNOX2-202ENST00000526955 HDAC1Q13547 482 aaPredicted RBP12.67□□□□□ -0.38
PKNOX2-202ENST00000526955 PDCL3Q9H2J4 239 aa12.67□□□□□ -0.38
PKNOX2-202ENST00000526955 MINK1Q8N4C8 1332 aaPredicted RBP12.67□□□□□ -0.38
PKNOX2-202ENST00000526955 ZSCAN30Q86W11 494 aa12.67□□□□□ -0.38
PKNOX2-202ENST00000526955 MAST1Q9Y2H9 1570 aa12.66□□□□□ -0.38
PKNOX2-202ENST00000526955 SYCP2Q9BX26 1530 aa12.66□□□□□ -0.38
PKNOX2-202ENST00000526955 DMRT2Q9Y5R5 561 aa12.66□□□□□ -0.38
PKNOX2-202ENST00000526955 ATP10AO60312 1499 aa12.66□□□□□ -0.38
PKNOX2-202ENST00000526955 K7ELQ4 463 aaPredicted RBP12.65□□□□□ -0.38
PKNOX2-202ENST00000526955 ATF7IPQ6VMQ6 1270 aa12.65□□□□□ -0.38
PKNOX2-202ENST00000526955 KDM5AP29375 1690 aaKnown RBP12.65□□□□□ -0.38
PKNOX2-202ENST00000526955 UNC13BO14795 1591 aa12.65□□□□□ -0.38
PKNOX2-202ENST00000526955 TNPO1Q92973 898 aaKnown RBP12.65□□□□□ -0.39
PKNOX2-202ENST00000526955 NUTM2BA6NNL0 878 aaPredicted RBP12.64□□□□□ -0.39
PKNOX2-202ENST00000526955 NUTM2EB1AL46 878 aaPredicted RBP12.64□□□□□ -0.39
PKNOX2-202ENST00000526955 MCCP23508 829 aa12.64□□□□□ -0.39
PKNOX2-202ENST00000526955 MTHFSP49914 203 aa12.64□□□□□ -0.39
PKNOX2-202ENST00000526955 KIAA1211Q6ZU35 1233 aa12.64□□□□□ -0.39
PKNOX2-202ENST00000526955 NUTM2AQ8IVF1 878 aaPredicted RBP12.64□□□□□ -0.39
PKNOX2-202ENST00000526955 GCC1Q96CN9 775 aa12.64□□□□□ -0.39
PKNOX2-202ENST00000526955 PLXNC1O60486 1568 aa12.64□□□□□ -0.39
PKNOX2-202ENST00000526955 NSD3Q9BZ95 1437 aa12.64□□□□□ -0.39
PKNOX2-202ENST00000526955 ANKRD45Q5TZF3 282 aa12.64□□□□□ -0.39
PKNOX2-202ENST00000526955 SMC5Q8IY18 1101 aa12.64□□□□□ -0.39
PKNOX2-202ENST00000526955 BCL11BQ9C0K0 894 aaPredicted RBP12.64□□□□□ -0.39
PKNOX2-202ENST00000526955 FOXD4L1Q9NU39 408 aa12.64□□□□□ -0.39
PKNOX2-202ENST00000526955 NLRP2Q9NX02 1062 aa12.64□□□□□ -0.39
PKNOX2-202ENST00000526955 CFAP70Q5T0N1 1121 aa12.63□□□□□ -0.39
PKNOX2-202ENST00000526955 SYAP1Q96A49 352 aaPredicted RBP12.63□□□□□ -0.39
PKNOX2-202ENST00000526955 ZMYND15Q9H091 742 aa12.63□□□□□ -0.39
PKNOX2-202ENST00000526955 ST18O60284 1047 aa12.63□□□□□ -0.39
PKNOX2-202ENST00000526955 LNPKQ9C0E8 428 aa12.63□□□□□ -0.39
PKNOX2-202ENST00000526955 ABCA8O94911 1581 aa12.63□□□□□ -0.39
PKNOX2-202ENST00000526955 DNTTIP2Q5QJE6 756 aaKnown RBP12.63□□□□□ -0.39
PKNOX2-202ENST00000526955 PLA2R1Q13018 1463 aa12.63□□□□□ -0.39
PKNOX2-202ENST00000526955 IQGAP3Q86VI3 1631 aa12.63□□□□□ -0.39
PKNOX2-202ENST00000526955 GPATCH3Q96I76 525 aa12.62□□□□□ -0.39
PKNOX2-202ENST00000526955 PPP1R1BQ9UD71 204 aaPredicted RBP12.62□□□□□ -0.39
PKNOX2-202ENST00000526955 CDC45O75419 566 aa12.62□□□□□ -0.39
PKNOX2-202ENST00000526955 EXOSC9Q06265 439 aaKnown RBP12.62□□□□□ -0.39
PKNOX2-202ENST00000526955 ABCC11Q96J66 1382 aa12.62□□□□□ -0.39
PKNOX2-202ENST00000526955 GNL2Q13823 731 aaKnown RBP12.62□□□□□ -0.39
PKNOX2-202ENST00000526955 CHD1LQ86WJ1 897 aa12.61□□□□□ -0.39
PKNOX2-202ENST00000526955 NOL10Q9BSC4 688 aaKnown RBP12.61□□□□□ -0.39
PKNOX2-202ENST00000526955 RABEP1Q15276 862 aa12.61□□□□□ -0.39
PKNOX2-202ENST00000526955 RLBP1P12271 317 aa12.61□□□□□ -0.39
PKNOX2-202ENST00000526955 NEXNQ0ZGT2 675 aa12.61□□□□□ -0.39
PKNOX2-202ENST00000526955 TRIM34Q9BYJ4 488 aa12.61□□□□□ -0.39
PKNOX2-202ENST00000526955 ZNF428Q96B54 188 aa12.61□□□□□ -0.39
PKNOX2-202ENST00000526955 CWC22Q9HCG8 908 aaKnown RBP12.61□□□□□ -0.39
PKNOX2-202ENST00000526955 SAMD9LQ8IVG5 1584 aa12.6□□□□□ -0.39
PKNOX2-202ENST00000526955 NSD2O96028 1365 aa12.6□□□□□ -0.39
PKNOX2-202ENST00000526955 HMMRO75330 724 aa12.6□□□□□ -0.39
PKNOX2-202ENST00000526955 RBM25P49756 843 aaKnown RBP12.6□□□□□ -0.39
PKNOX2-202ENST00000526955 RAB3GAP1Q15042 981 aa12.6□□□□□ -0.39
PKNOX2-202ENST00000526955 TTC37Q6PGP7 1564 aa12.6□□□□□ -0.39
PKNOX2-202ENST00000526955 CTDP1Q9Y5B0 961 aaPredicted RBP12.6□□□□□ -0.39
PKNOX2-202ENST00000526955 PREX2Q70Z35 1606 aa12.6□□□□□ -0.39
PKNOX2-202ENST00000526955 BMP2KLQ5H9B9 411 aa12.6□□□□□ -0.39
PKNOX2-202ENST00000526955 CCDC39Q9UFE4 941 aa12.6□□□□□ -0.39
PKNOX2-202ENST00000526955 NOB1Q9ULX3 412 aaKnown RBP12.6□□□□□ -0.39
PKNOX2-202ENST00000526955 KLHL40Q2TBA0 621 aa12.59□□□□□ -0.39
PKNOX2-202ENST00000526955 VIRMAQ69YN4 1812 aaKnown RBP12.59□□□□□ -0.39
PKNOX2-202ENST00000526955 KIAA2012Q0VF49 1180 aa12.59□□□□□ -0.39
PKNOX2-202ENST00000526955 HS1BP3Q53T59 392 aa12.59□□□□□ -0.39
PKNOX2-202ENST00000526955 ESCO1Q5FWF5 840 aa12.59□□□□□ -0.39
PKNOX2-202ENST00000526955 GOLGA6L4A6NEF3 574 aa12.59□□□□□ -0.39
PKNOX2-202ENST00000526955 APBB1O00213 710 aa12.59□□□□□ -0.39
PKNOX2-202ENST00000526955 PHF14O94880 888 aa12.59□□□□□ -0.39
PKNOX2-202ENST00000526955 TERF1P54274 439 aa12.59□□□□□ -0.39
PKNOX2-202ENST00000526955 AFAP1Q8N556 730 aa12.59□□□□□ -0.39
PKNOX2-202ENST00000526955 IL16Q14005 1332 aa12.58□□□□□ -0.4
PKNOX2-202ENST00000526955 MCTP1Q6DN14 999 aa12.58□□□□□ -0.4
PKNOX2-202ENST00000526955 SLC4A10Q6U841 1118 aa12.58□□□□□ -0.4
PKNOX2-202ENST00000526955 R3HCC1Q9Y3T6 440 aaKnown RBP12.58□□□□□ -0.4
PKNOX2-202ENST00000526955 MYO5CQ9NQX4 1742 aa12.58□□□□□ -0.4
PKNOX2-202ENST00000526955 TRIM27P14373 513 aa12.58□□□□□ -0.4
PKNOX2-202ENST00000526955 RIPK4P57078 832 aa12.58□□□□□ -0.4
PKNOX2-202ENST00000526955 ALDH1L2Q3SY69 923 aa12.58□□□□□ -0.4
PKNOX2-202ENST00000526955 FAM13BQ9NYF5 915 aa12.58□□□□□ -0.4
PKNOX2-202ENST00000526955 RNF17Q9BXT8 1623 aaKnown RBP12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms