RNA–Protein interactions for RNA: ENST00000526606.1

AMBRA1-205, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 4

Gene AMBRA1, Length 522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-205ENST00000526606 ANKARQ7Z5J8 1434 aa29.31■■■□□ 2.28
AMBRA1-205ENST00000526606 PRR36Q9H6K5 1346 aa29.28■■■□□ 2.28
AMBRA1-205ENST00000526606 TRIM37O94972 964 aa29.28■■■□□ 2.28
AMBRA1-205ENST00000526606 CRYBG1Q9Y4K1 1723 aa29.27■■■□□ 2.28
AMBRA1-205ENST00000526606 ACIN1Q9UKV3 1341 aaKnown RBP29.26■■■□□ 2.27
AMBRA1-205ENST00000526606 SPATA31A1Q5TZJ5 1347 aa29.24■■■□□ 2.27
AMBRA1-205ENST00000526606 POGKQ9P215 609 aa29.24■■■□□ 2.27
AMBRA1-205ENST00000526606 DLC1Q96QB1 1528 aa29.24■■■□□ 2.27
AMBRA1-205ENST00000526606 ADGRB2O60241 1585 aa29.23■■■□□ 2.27
AMBRA1-205ENST00000526606 HIRIP3Q9BW71 556 aaPredicted RBP29.23■■■□□ 2.27
AMBRA1-205ENST00000526606 FAM196AQ6ZSG2 479 aa29.22■■■□□ 2.27
AMBRA1-205ENST00000526606 GPRASP1Q5JY77 1395 aa29.22■■■□□ 2.27
AMBRA1-205ENST00000526606 PRDM11Q9NQV5 511 aa29.21■■■□□ 2.27
AMBRA1-205ENST00000526606 APBA3O96018 575 aa29.2■■■□□ 2.26
AMBRA1-205ENST00000526606 YY1P25490 414 aa29.2■■■□□ 2.26
AMBRA1-205ENST00000526606 CHRNA2Q15822 529 aa29.17■■■□□ 2.26
AMBRA1-205ENST00000526606 MINK1Q8N4C8 1332 aaPredicted RBP29.17■■■□□ 2.26
AMBRA1-205ENST00000526606 PARD3Q8TEW0 1356 aa29.16■■■□□ 2.26
AMBRA1-205ENST00000526606 KIAA0232Q92628 1395 aa29.16■■■□□ 2.26
AMBRA1-205ENST00000526606 TRAK1Q9UPV9 953 aa29.16■■■□□ 2.26
AMBRA1-205ENST00000526606 ADGRB1O14514 1584 aa29.16■■■□□ 2.26
AMBRA1-205ENST00000526606 PAK3O75914 559 aaPredicted RBP29.15■■■□□ 2.26
AMBRA1-205ENST00000526606 RREB1Q92766 1687 aa29.15■■■□□ 2.26
AMBRA1-205ENST00000526606 WASLO00401 505 aaPredicted RBP29.14■■■□□ 2.26
AMBRA1-205ENST00000526606 TULP4Q9NRJ4 1543 aa29.14■■■□□ 2.25
AMBRA1-205ENST00000526606 NGDNQ8NEJ9 315 aaKnown RBP29.13■■■□□ 2.25
AMBRA1-205ENST00000526606 STRN4Q9NRL3 753 aa29.13■■■□□ 2.25
AMBRA1-205ENST00000526606 NUP188Q5SRE5 1749 aa29.11■■■□□ 2.25
AMBRA1-205ENST00000526606 ZC3H6P61129 1189 aaKnown RBP29.09■■■□□ 2.25
AMBRA1-205ENST00000526606 BARGINQ6ZT62 677 aa29.08■■■□□ 2.25
AMBRA1-205ENST00000526606 USP35Q9P2H5 1018 aa29.08■■■□□ 2.25
AMBRA1-205ENST00000526606 EIF3AQ14152 1382 aaKnown RBP29.08■■■□□ 2.25
AMBRA1-205ENST00000526606 PHRF1Q9P1Y6 1649 aaKnown RBP29.05■■■□□ 2.24
AMBRA1-205ENST00000526606 NBPF8Q3BBV2 869 aa29.05■■■□□ 2.24
AMBRA1-205ENST00000526606 NBPF14Q5TI25 921 aa29.05■■■□□ 2.24
AMBRA1-205ENST00000526606 PDE3BQ13370 1112 aa29.04■■■□□ 2.24
AMBRA1-205ENST00000526606 NUTM2GQ5VZR2 741 aa29.04■■■□□ 2.24
AMBRA1-205ENST00000526606 UTRNP46939 3433 aa29.04■■■□□ 2.24
AMBRA1-205ENST00000526606 SSH2Q76I76 1423 aa29.03■■■□□ 2.24
AMBRA1-205ENST00000526606 KCNQ2O43526 872 aa29.02■■■□□ 2.24
AMBRA1-205ENST00000526606 LARP1Q6PKG0 1096 aaKnown RBP29.02■■■□□ 2.24
AMBRA1-205ENST00000526606 NUDT16Q96DE0 195 aaKnown RBP29.02■■■□□ 2.24
AMBRA1-205ENST00000526606 SPON1Q9HCB6 807 aa29.02■■■□□ 2.24
AMBRA1-205ENST00000526606 CAMTA1Q9Y6Y1 1673 aa29.02■■■□□ 2.24
AMBRA1-205ENST00000526606 ATP7BP35670 1465 aa29■■■□□ 2.23
AMBRA1-205ENST00000526606 EVA1CP58658 441 aa29■■■□□ 2.23
AMBRA1-205ENST00000526606 TCP11L2Q8N4U5 519 aa28.97■■■□□ 2.23
AMBRA1-205ENST00000526606 PPP1R1BQ9UD71 204 aaPredicted RBP28.97■■■□□ 2.23
AMBRA1-205ENST00000526606 NINLQ9Y2I6 1382 aa28.95■■■□□ 2.22
AMBRA1-205ENST00000526606 LMO7Q8WWI1 1683 aa28.94■■■□□ 2.22
AMBRA1-205ENST00000526606 KDM2AQ9Y2K7 1162 aa28.94■■■□□ 2.22
AMBRA1-205ENST00000526606 POLR3AO14802 1390 aaPredicted RBP28.93■■■□□ 2.22
AMBRA1-205ENST00000526606 ITSN1Q15811 1721 aa28.93■■■□□ 2.22
AMBRA1-205ENST00000526606 NRKQ7Z2Y5 1582 aa28.92■■■□□ 2.22
AMBRA1-205ENST00000526606 ACEP12821 1306 aa28.92■■■□□ 2.22
AMBRA1-205ENST00000526606 CPDO75976 1380 aa28.91■■■□□ 2.22
AMBRA1-205ENST00000526606 CDK19Q9BWU1 502 aa28.91■■■□□ 2.22
AMBRA1-205ENST00000526606 PDGFDQ9GZP0 370 aaPredicted RBP28.9■■■□□ 2.22
AMBRA1-205ENST00000526606 THRAP3Q9Y2W1 955 aaKnown RBP28.9■■■□□ 2.22
AMBRA1-205ENST00000526606 DCAF11Q8TEB1 546 aa28.89■■■□□ 2.22
AMBRA1-205ENST00000526606 PARP4Q9UKK3 1724 aaKnown RBP28.89■■■□□ 2.21
AMBRA1-205ENST00000526606 ANO8Q9HCE9 1232 aaPredicted RBP28.88■■■□□ 2.21
AMBRA1-205ENST00000526606 ARHGEF28Q8N1W1 1705 aaKnown RBP28.88■■■□□ 2.21
AMBRA1-205ENST00000526606 PEAK1Q9H792 1746 aa28.88■■■□□ 2.21
AMBRA1-205ENST00000526606 USP19O94966 1318 aa28.88■■■□□ 2.21
AMBRA1-205ENST00000526606 PLEKHG3A1L390 1219 aa28.87■■■□□ 2.21
AMBRA1-205ENST00000526606 DCAF8L1A6NGE4 600 aa28.87■■■□□ 2.21
AMBRA1-205ENST00000526606 PTF1AQ7RTS3 328 aa28.87■■■□□ 2.21
AMBRA1-205ENST00000526606 ABTB2Q8N961 1025 aa28.87■■■□□ 2.21
AMBRA1-205ENST00000526606 PLSCR1O15162 318 aa28.86■■■□□ 2.21
AMBRA1-205ENST00000526606 CCDC61Q9Y6R9 512 aa28.85■■■□□ 2.21
AMBRA1-205ENST00000526606 CASZ1Q86V15 1759 aa28.85■■■□□ 2.21
AMBRA1-205ENST00000526606 TOPAZ1Q8N9V7 1692 aa28.84■■■□□ 2.21
AMBRA1-205ENST00000526606 PROM2Q8N271 834 aa28.84■■■□□ 2.21
AMBRA1-205ENST00000526606 SBF2Q86WG5 1849 aa28.83■■■□□ 2.21
AMBRA1-205ENST00000526606 GCP02774 474 aa28.83■■■□□ 2.21
AMBRA1-205ENST00000526606 COL5A2P05997 1499 aaPredicted RBP28.83■■■□□ 2.21
AMBRA1-205ENST00000526606 RGPD3A6NKT7 1758 aaPredicted RBP28.8■■■□□ 2.2
AMBRA1-205ENST00000526606 RGPD4Q7Z3J3 1758 aa28.8■■■□□ 2.2
AMBRA1-205ENST00000526606 C11orf95C9JLR9 678 aaPredicted RBP28.8■■■□□ 2.2
AMBRA1-205ENST00000526606 PTGER2P43116 358 aa28.8■■■□□ 2.2
AMBRA1-205ENST00000526606 ZNF784Q8NCA9 323 aaPredicted RBP28.8■■■□□ 2.2
AMBRA1-205ENST00000526606 OVOS2A0A0G2JMS6 1433 aa28.79■■■□□ 2.2
AMBRA1-205ENST00000526606 OVOS2A0A0J9YW53 1432 aa28.79■■■□□ 2.2
AMBRA1-205ENST00000526606 OVOS2Q6IE36 1432 aa28.79■■■□□ 2.2
AMBRA1-205ENST00000526606 CRB1P82279 1406 aa28.77■■■□□ 2.2
AMBRA1-205ENST00000526606 ZBTB7AO95365 584 aa28.77■■■□□ 2.2
AMBRA1-205ENST00000526606 NLRP13Q86W25 1043 aa28.77■■■□□ 2.2
AMBRA1-205ENST00000526606 STAC3Q96MF2 364 aa28.77■■■□□ 2.2
AMBRA1-205ENST00000526606 BCL11BQ9C0K0 894 aaPredicted RBP28.77■■■□□ 2.2
AMBRA1-205ENST00000526606 MYOM1P52179 1685 aa28.74■■■□□ 2.19
AMBRA1-205ENST00000526606 LRRC37A3O60309 1634 aa28.74■■■□□ 2.19
AMBRA1-205ENST00000526606 DDB1Q16531 1140 aa28.73■■■□□ 2.19
AMBRA1-205ENST00000526606 ATF5Q9Y2D1 282 aaPredicted RBP28.73■■■□□ 2.19
AMBRA1-205ENST00000526606 MARCH10Q8NA82 808 aaPredicted RBP28.72■■■□□ 2.19
AMBRA1-205ENST00000526606 RAB3GAP2Q9H2M9 1393 aa28.71■■■□□ 2.19
AMBRA1-205ENST00000526606 AATKQ6ZMQ8 1374 aa28.7■■■□□ 2.18
AMBRA1-205ENST00000526606 SYT17Q9BSW7 474 aa28.69■■■□□ 2.18
AMBRA1-205ENST00000526606 AXIN2Q9Y2T1 843 aa28.68■■■□□ 2.18
AMBRA1-205ENST00000526606 ZBTB7CA1YPR0 619 aa28.67■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms