RNA–Protein interactions for RNA: ENST00000526422.2

NCAPD3-204, Transcript of non-SMC condensin II complex subunit D3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene NCAPD3, Length 1,060 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCAPD3-204ENST00000526422 TRPM1Q7Z4N2 1603 aa29.6■■■□□ 2.33
NCAPD3-204ENST00000526422 TOPAZ1Q8N9V7 1692 aa29.6■■■□□ 2.33
NCAPD3-204ENST00000526422 NBPF8Q3BBV2 869 aa29.59■■■□□ 2.33
NCAPD3-204ENST00000526422 CABP2Q9NPB3 220 aa29.59■■■□□ 2.33
NCAPD3-204ENST00000526422 QRICH2Q9H0J4 1663 aa29.59■■■□□ 2.33
NCAPD3-204ENST00000526422 PLEKHG3A1L390 1219 aa29.58■■■□□ 2.33
NCAPD3-204ENST00000526422 POLR3AO14802 1390 aaPredicted RBP29.58■■■□□ 2.33
NCAPD3-204ENST00000526422 VPS72Q15906 364 aa29.58■■■□□ 2.33
NCAPD3-204ENST00000526422 NWD2Q9ULI1 1742 aa29.58■■■□□ 2.33
NCAPD3-204ENST00000526422 CCDC9Q9Y3X0 531 aaKnown RBP29.58■■■□□ 2.33
NCAPD3-204ENST00000526422 ROCK2O75116 1388 aaKnown RBP29.55■■■□□ 2.32
NCAPD3-204ENST00000526422 NUTM2GQ5VZR2 741 aa29.55■■■□□ 2.32
NCAPD3-204ENST00000526422 CRYBG1Q9Y4K1 1723 aa29.54■■■□□ 2.32
NCAPD3-204ENST00000526422 BTG4Q9NY30 223 aa29.54■■■□□ 2.32
NCAPD3-204ENST00000526422 TRIM26Q12899 539 aaPredicted RBP29.53■■■□□ 2.32
NCAPD3-204ENST00000526422 PPIP5K1Q6PFW1 1433 aa29.53■■■□□ 2.32
NCAPD3-204ENST00000526422 COL14A1Q05707 1796 aaKnown RBP29.51■■■□□ 2.31
NCAPD3-204ENST00000526422 SEPT12Q8IYM1 358 aa29.49■■■□□ 2.31
NCAPD3-204ENST00000526422 PRDM11Q9NQV5 511 aa29.49■■■□□ 2.31
NCAPD3-204ENST00000526422 NRAPQ86VF7 1730 aa29.48■■■□□ 2.31
NCAPD3-204ENST00000526422 ABTB2Q8N961 1025 aa29.47■■■□□ 2.31
NCAPD3-204ENST00000526422 CABP1Q9NZU7 370 aa29.47■■■□□ 2.31
NCAPD3-204ENST00000526422 EVC2Q86UK5 1308 aa29.46■■■□□ 2.31
NCAPD3-204ENST00000526422 BRWD3Q6RI45 1802 aa29.46■■■□□ 2.31
NCAPD3-204ENST00000526422 KIAA0232Q92628 1395 aa29.46■■■□□ 2.31
NCAPD3-204ENST00000526422 EP400Q96L91 3159 aa29.46■■■□□ 2.31
NCAPD3-204ENST00000526422 PHRF1Q9P1Y6 1649 aaKnown RBP29.45■■■□□ 2.31
NCAPD3-204ENST00000526422 ZC3H6P61129 1189 aaKnown RBP29.45■■■□□ 2.31
NCAPD3-204ENST00000526422 CHRNA2Q15822 529 aa29.45■■■□□ 2.31
NCAPD3-204ENST00000526422 ONECUT3O60422 494 aaPredicted RBP29.44■■■□□ 2.3
NCAPD3-204ENST00000526422 TONSLQ96HA7 1378 aa29.43■■■□□ 2.3
NCAPD3-204ENST00000526422 A0A0G2JS52 829 aa29.42■■■□□ 2.3
NCAPD3-204ENST00000526422 MYT1Q01538 1121 aa29.42■■■□□ 2.3
NCAPD3-204ENST00000526422 FAM98CQ17RN3 349 aaKnown RBP29.41■■■□□ 2.3
NCAPD3-204ENST00000526422 CARD11Q9BXL7 1154 aa29.39■■■□□ 2.3
NCAPD3-204ENST00000526422 NLRP13Q86W25 1043 aa29.38■■■□□ 2.29
NCAPD3-204ENST00000526422 SPATA31A5Q5VU36 1347 aa29.38■■■□□ 2.29
NCAPD3-204ENST00000526422 SPATA31A7Q8IWB4 1347 aa29.38■■■□□ 2.29
NCAPD3-204ENST00000526422 KRT27Q7Z3Y8 459 aa29.37■■■□□ 2.29
NCAPD3-204ENST00000526422 CCDC125Q86Z20 511 aa29.37■■■□□ 2.29
NCAPD3-204ENST00000526422 STRN4Q9NRL3 753 aa29.37■■■□□ 2.29
NCAPD3-204ENST00000526422 USP6P35125 1406 aa29.37■■■□□ 2.29
NCAPD3-204ENST00000526422 USP19O94966 1318 aa29.36■■■□□ 2.29
NCAPD3-204ENST00000526422 NRKQ7Z2Y5 1582 aa29.35■■■□□ 2.29
NCAPD3-204ENST00000526422 BRD4O60885 1362 aaPredicted RBP29.35■■■□□ 2.29
NCAPD3-204ENST00000526422 GCP02774 474 aa29.33■■■□□ 2.29
NCAPD3-204ENST00000526422 NLRP6P59044 892 aa29.32■■■□□ 2.28
NCAPD3-204ENST00000526422 BLMP54132 1417 aaPredicted RBP29.3■■■□□ 2.28
NCAPD3-204ENST00000526422 EVA1CP58658 441 aa29.3■■■□□ 2.28
NCAPD3-204ENST00000526422 CPDO75976 1380 aa29.29■■■□□ 2.28
NCAPD3-204ENST00000526422 SPATA31A1Q5TZJ5 1347 aa29.29■■■□□ 2.28
NCAPD3-204ENST00000526422 SSH2Q76I76 1423 aa29.28■■■□□ 2.28
NCAPD3-204ENST00000526422 CAMTA1Q9Y6Y1 1673 aa29.28■■■□□ 2.28
NCAPD3-204ENST00000526422 ZNF692Q9BU19 519 aaPredicted RBP29.27■■■□□ 2.28
NCAPD3-204ENST00000526422 SBNO2Q9Y2G9 1366 aa29.26■■■□□ 2.28
NCAPD3-204ENST00000526422 ZBTB7CA1YPR0 619 aa29.26■■■□□ 2.27
NCAPD3-204ENST00000526422 USP35Q9P2H5 1018 aa29.26■■■□□ 2.27
NCAPD3-204ENST00000526422 FAM182BQ5T319 152 aa29.25■■■□□ 2.27
NCAPD3-204ENST00000526422 PIK3C2AO00443 1686 aa29.25■■■□□ 2.27
NCAPD3-204ENST00000526422 TTC21BQ7Z4L5 1316 aa29.24■■■□□ 2.27
NCAPD3-204ENST00000526422 AKAP12Q02952 1782 aa29.24■■■□□ 2.27
NCAPD3-204ENST00000526422 SF3B2Q13435 895 aaKnown RBP29.24■■■□□ 2.27
NCAPD3-204ENST00000526422 DEFB132Q7Z7B7 95 aa29.24■■■□□ 2.27
NCAPD3-204ENST00000526422 LMO7Q8WWI1 1683 aa29.24■■■□□ 2.27
NCAPD3-204ENST00000526422 LARP1Q6PKG0 1096 aaKnown RBP29.23■■■□□ 2.27
NCAPD3-204ENST00000526422 THSD7AQ9UPZ6 1657 aa29.23■■■□□ 2.27
NCAPD3-204ENST00000526422 CPSF1Q10570 1443 aaKnown RBP29.21■■■□□ 2.27
NCAPD3-204ENST00000526422 SLIT3O75094 1523 aa29.21■■■□□ 2.27
NCAPD3-204ENST00000526422 KTN1Q86UP2 1357 aaKnown RBP29.21■■■□□ 2.27
NCAPD3-204ENST00000526422 ZRANB1Q9UGI0 708 aa29.19■■■□□ 2.26
NCAPD3-204ENST00000526422 TMC1Q8TDI8 760 aa29.18■■■□□ 2.26
NCAPD3-204ENST00000526422 TTC21AQ8NDW8 1320 aa29.18■■■□□ 2.26
NCAPD3-204ENST00000526422 SOX12O15370 315 aa29.16■■■□□ 2.26
NCAPD3-204ENST00000526422 COL5A2P05997 1499 aaPredicted RBP29.16■■■□□ 2.26
NCAPD3-204ENST00000526422 BARGINQ6ZT62 677 aa29.15■■■□□ 2.26
NCAPD3-204ENST00000526422 SLC12A5Q9H2X9 1139 aa29.15■■■□□ 2.26
NCAPD3-204ENST00000526422 AATKQ6ZMQ8 1374 aa29.14■■■□□ 2.26
NCAPD3-204ENST00000526422 SUGP2Q8IX01 1082 aaKnown RBP eCLIP29.14■■■□□ 2.26
NCAPD3-204ENST00000526422 TCP11L2Q8N4U5 519 aa29.14■■■□□ 2.26
NCAPD3-204ENST00000526422 ST20-MTHFSA0A0A6YYL1 179 aa29.13■■■□□ 2.25
NCAPD3-204ENST00000526422 MON2Q7Z3U7 1717 aa29.13■■■□□ 2.25
NCAPD3-204ENST00000526422 KCNH5Q8NCM2 988 aa29.12■■■□□ 2.25
NCAPD3-204ENST00000526422 CD163L1Q9NR16 1453 aa29.11■■■□□ 2.25
NCAPD3-204ENST00000526422 TESK2Q96S53 571 aa29.11■■■□□ 2.25
NCAPD3-204ENST00000526422 ARHGEF25Q86VW2 580 aa29.1■■■□□ 2.25
NCAPD3-204ENST00000526422 AXIN2Q9Y2T1 843 aa29.1■■■□□ 2.25
NCAPD3-204ENST00000526422 COL18A1P39060 1754 aa29.1■■■□□ 2.25
NCAPD3-204ENST00000526422 BAG6P46379 1132 aa29.09■■■□□ 2.25
NCAPD3-204ENST00000526422 HDGFL2Q7Z4V5 671 aaPredicted RBP29.09■■■□□ 2.25
NCAPD3-204ENST00000526422 THRAP3Q9Y2W1 955 aaKnown RBP29.09■■■□□ 2.25
NCAPD3-204ENST00000526422 CRB1P82279 1406 aa29.09■■■□□ 2.25
NCAPD3-204ENST00000526422 PDE3BQ13370 1112 aa29.08■■■□□ 2.25
NCAPD3-204ENST00000526422 PCGF6Q9BYE7 350 aa29.08■■■□□ 2.25
NCAPD3-204ENST00000526422 NME9Q86XW9 330 aa29.07■■■□□ 2.24
NCAPD3-204ENST00000526422 RGPD1P0DJD0 1748 aa29.06■■■□□ 2.24
NCAPD3-204ENST00000526422 FAM196AQ6ZSG2 479 aa29.06■■■□□ 2.24
NCAPD3-204ENST00000526422 PUS7Q96PZ0 661 aaKnown RBP29.06■■■□□ 2.24
NCAPD3-204ENST00000526422 TOM1L2Q6ZVM7 507 aa29.05■■■□□ 2.24
NCAPD3-204ENST00000526422 TERF2IPQ9NYB0 399 aa29.05■■■□□ 2.24
NCAPD3-204ENST00000526422 TRIM37O94972 964 aa29.04■■■□□ 2.24
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms