RNA–Protein interactions for RNA: ENST00000525984.2

AP003063.2-201, humanhuman

TSL 1 (best) BASIC

Gene AP003063.2, Length 2,067 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003063.2-201ENST00000525984 USP6P35125 1406 aa17.5■□□□□ 0.39
AP003063.2-201ENST00000525984 PSME1Q06323 249 aa17.49■□□□□ 0.39
AP003063.2-201ENST00000525984 POLR3AO14802 1390 aaPredicted RBP17.49■□□□□ 0.39
AP003063.2-201ENST00000525984 BRD4O60885 1362 aaPredicted RBP17.49■□□□□ 0.39
AP003063.2-201ENST00000525984 TTC21BQ7Z4L5 1316 aa17.49■□□□□ 0.39
AP003063.2-201ENST00000525984 DCCP43146 1447 aa17.48■□□□□ 0.39
AP003063.2-201ENST00000525984 FOXO3O43524 673 aa17.48■□□□□ 0.39
AP003063.2-201ENST00000525984 ZRANB1Q9UGI0 708 aa17.48■□□□□ 0.39
AP003063.2-201ENST00000525984 C1orf167Q5SNV9 1468 aa17.48■□□□□ 0.39
AP003063.2-201ENST00000525984 COG3Q96JB2 828 aa17.48■□□□□ 0.39
AP003063.2-201ENST00000525984 AKAP12Q02952 1782 aa17.47■□□□□ 0.39
AP003063.2-201ENST00000525984 XPCQ01831 940 aaPredicted RBP17.47■□□□□ 0.39
AP003063.2-201ENST00000525984 MON2Q7Z3U7 1717 aa17.47■□□□□ 0.39
AP003063.2-201ENST00000525984 MST1RQ04912 1400 aa17.46■□□□□ 0.38
AP003063.2-201ENST00000525984 KIF20BQ96Q89 1820 aa17.44■□□□□ 0.38
AP003063.2-201ENST00000525984 NUTM2GQ5VZR2 741 aa17.44■□□□□ 0.38
AP003063.2-201ENST00000525984 XIRP1Q702N8 1843 aaKnown RBP17.44■□□□□ 0.38
AP003063.2-201ENST00000525984 SOX12O15370 315 aa17.43■□□□□ 0.38
AP003063.2-201ENST00000525984 ABTB2Q8N961 1025 aa17.43■□□□□ 0.38
AP003063.2-201ENST00000525984 TTC21AQ8NDW8 1320 aa17.43■□□□□ 0.38
AP003063.2-201ENST00000525984 PPM1GO15355 546 aaPredicted RBP17.43■□□□□ 0.38
AP003063.2-201ENST00000525984 MTHFSP49914 203 aa17.43■□□□□ 0.38
AP003063.2-201ENST00000525984 LMOD2Q6P5Q4 547 aa17.43■□□□□ 0.38
AP003063.2-201ENST00000525984 SLAIN2Q9P270 581 aa17.43■□□□□ 0.38
AP003063.2-201ENST00000525984 FBLN1P23142 703 aa17.42■□□□□ 0.38
AP003063.2-201ENST00000525984 PLEKHG5O94827 1062 aa17.41■□□□□ 0.38
AP003063.2-201ENST00000525984 NLRP6P59044 892 aa17.41■□□□□ 0.38
AP003063.2-201ENST00000525984 PNISRQ8TF01 805 aaKnown RBP17.41■□□□□ 0.38
AP003063.2-201ENST00000525984 NRKQ7Z2Y5 1582 aa17.41■□□□□ 0.38
AP003063.2-201ENST00000525984 DDX17Q92841 729 aaKnown RBP17.41■□□□□ 0.38
AP003063.2-201ENST00000525984 SSH2Q76I76 1423 aa17.41■□□□□ 0.38
AP003063.2-201ENST00000525984 KRT28Q7Z3Y7 464 aa17.4■□□□□ 0.38
AP003063.2-201ENST00000525984 WDR43Q15061 677 aaKnown RBP eCLIP17.4■□□□□ 0.38
AP003063.2-201ENST00000525984 CFAP53Q96M91 514 aa17.4■□□□□ 0.38
AP003063.2-201ENST00000525984 ANKRD26Q9UPS8 1709 aa17.39■□□□□ 0.37
AP003063.2-201ENST00000525984 HNRNPUQ00839 825 aaKnown RBP eCLIP17.38■□□□□ 0.37
AP003063.2-201ENST00000525984 BRINP3Q76B58 766 aa17.38■□□□□ 0.37
AP003063.2-201ENST00000525984 KIF1AQ12756 1690 aa17.37■□□□□ 0.37
AP003063.2-201ENST00000525984 RRS1Q15050 365 aaKnown RBP17.37■□□□□ 0.37
AP003063.2-201ENST00000525984 NPHP3Q7Z494 1330 aa17.37■□□□□ 0.37
AP003063.2-201ENST00000525984 LTBP4Q8N2S1 1624 aa17.36■□□□□ 0.37
AP003063.2-201ENST00000525984 OVOS2A0A0J9YW53 1432 aa17.35■□□□□ 0.37
AP003063.2-201ENST00000525984 OVOS2Q6IE36 1432 aa17.35■□□□□ 0.37
AP003063.2-201ENST00000525984 SCAF1Q9H7N4 1312 aaKnown RBP17.35■□□□□ 0.37
AP003063.2-201ENST00000525984 SENP3-EIF4A1A0A087X0R7 540 aa17.35■□□□□ 0.37
AP003063.2-201ENST00000525984 POLKQ9UBT6 870 aa17.35■□□□□ 0.37
AP003063.2-201ENST00000525984 EMILIN1Q9Y6C2 1016 aa17.35■□□□□ 0.37
AP003063.2-201ENST00000525984 PIK3C2AO00443 1686 aa17.33■□□□□ 0.37
AP003063.2-201ENST00000525984 ADAMTS8Q9UP79 889 aa17.33■□□□□ 0.36
AP003063.2-201ENST00000525984 CENPBP07199 599 aaPredicted RBP17.32■□□□□ 0.36
AP003063.2-201ENST00000525984 USP31Q70CQ4 1352 aa17.32■□□□□ 0.36
AP003063.2-201ENST00000525984 AATKQ6ZMQ8 1374 aa17.31■□□□□ 0.36
AP003063.2-201ENST00000525984 ZBTB7CA1YPR0 619 aa17.3■□□□□ 0.36
AP003063.2-201ENST00000525984 U2SURPO15042 1029 aaKnown RBP17.3■□□□□ 0.36
AP003063.2-201ENST00000525984 NUDCQ9Y266 331 aa17.29■□□□□ 0.36
AP003063.2-201ENST00000525984 DIAPH1O60610 1272 aaKnown RBP17.28■□□□□ 0.36
AP003063.2-201ENST00000525984 AMPHP49418 695 aa17.28■□□□□ 0.36
AP003063.2-201ENST00000525984 U2AF1L5P0DN76 240 aaPredicted RBP17.28■□□□□ 0.36
AP003063.2-201ENST00000525984 U2AF1Q01081 240 aaKnown RBP eCLIP17.28■□□□□ 0.36
AP003063.2-201ENST00000525984 MAP2P11137 1827 aaKnown RBP17.27■□□□□ 0.36
AP003063.2-201ENST00000525984 PIP4K2BP78356 416 aa17.27■□□□□ 0.36
AP003063.2-201ENST00000525984 MAP3K19Q56UN5 1328 aa17.27■□□□□ 0.36
AP003063.2-201ENST00000525984 CCDC146Q8IYE0 955 aa17.27■□□□□ 0.35
AP003063.2-201ENST00000525984 KCNH5Q8NCM2 988 aa17.27■□□□□ 0.35
AP003063.2-201ENST00000525984 SALL2Q9Y467 1007 aaPredicted RBP17.27■□□□□ 0.35
AP003063.2-201ENST00000525984 TOM1O60784 492 aa17.26■□□□□ 0.35
AP003063.2-201ENST00000525984 SBNO1A3KN83 1393 aa17.26■□□□□ 0.35
AP003063.2-201ENST00000525984 PXDNQ92626 1479 aa17.26■□□□□ 0.35
AP003063.2-201ENST00000525984 TRPM3Q9HCF6 1732 aaPredicted RBP17.25■□□□□ 0.35
AP003063.2-201ENST00000525984 GCP02774 474 aa17.25■□□□□ 0.35
AP003063.2-201ENST00000525984 SPATA31A3Q5VYP0 1347 aa17.25■□□□□ 0.35
AP003063.2-201ENST00000525984 TNS3Q68CZ2 1445 aa17.25■□□□□ 0.35
AP003063.2-201ENST00000525984 HSP90AB2PQ58FF8 381 aa17.24■□□□□ 0.35
AP003063.2-201ENST00000525984 PNPLA6Q8IY17 1366 aa17.24■□□□□ 0.35
AP003063.2-201ENST00000525984 UBAP1LF5GYI3 381 aa17.24■□□□□ 0.35
AP003063.2-201ENST00000525984 CABLES1Q8TDN4 633 aa17.24■□□□□ 0.35
AP003063.2-201ENST00000525984 CDK12Q9NYV4 1490 aaPredicted RBP17.24■□□□□ 0.35
AP003063.2-201ENST00000525984 SMG6Q86US8 1419 aaKnown RBP17.23■□□□□ 0.35
AP003063.2-201ENST00000525984 SOS2Q07890 1332 aaPredicted RBP17.23■□□□□ 0.35
AP003063.2-201ENST00000525984 ARHGEF10O15013 1369 aa17.22■□□□□ 0.35
AP003063.2-201ENST00000525984 COL3A1P02461 1466 aaPredicted RBP17.22■□□□□ 0.35
AP003063.2-201ENST00000525984 HAP1P54257 671 aaPredicted RBP17.22■□□□□ 0.35
AP003063.2-201ENST00000525984 FLT4P35916 1363 aa17.21■□□□□ 0.35
AP003063.2-201ENST00000525984 ZC3H6P61129 1189 aaKnown RBP17.21■□□□□ 0.35
AP003063.2-201ENST00000525984 MARF1Q9Y4F3 1742 aaKnown RBP17.21■□□□□ 0.35
AP003063.2-201ENST00000525984 SHPRHQ149N8 1683 aa17.21■□□□□ 0.35
AP003063.2-201ENST00000525984 ROBO1Q9Y6N7 1651 aa17.21■□□□□ 0.35
AP003063.2-201ENST00000525984 INSRP06213 1382 aa17.2■□□□□ 0.34
AP003063.2-201ENST00000525984 USP19O94966 1318 aa17.2■□□□□ 0.34
AP003063.2-201ENST00000525984 LTV1Q96GA3 475 aaPredicted RBP17.2■□□□□ 0.34
AP003063.2-201ENST00000525984 ALS2Q96Q42 1657 aa17.2■□□□□ 0.34
AP003063.2-201ENST00000525984 BLMP54132 1417 aaPredicted RBP17.2■□□□□ 0.34
AP003063.2-201ENST00000525984 HMOX1P09601 288 aa17.19■□□□□ 0.34
AP003063.2-201ENST00000525984 HOXC9P31274 260 aa17.19■□□□□ 0.34
AP003063.2-201ENST00000525984 IL13P35225 146 aa17.19■□□□□ 0.34
AP003063.2-201ENST00000525984 EIF4A2Q14240 407 aaKnown RBP17.19■□□□□ 0.34
AP003063.2-201ENST00000525984 USP54Q70EL1 1684 aa17.19■□□□□ 0.34
AP003063.2-201ENST00000525984 ZBED9Q6R2W3 1325 aa17.19■□□□□ 0.34
AP003063.2-201ENST00000525984 CERKQ8TCT0 537 aa17.19■□□□□ 0.34
AP003063.2-201ENST00000525984 PEAK1Q9H792 1746 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms