RNA–Protein interactions for RNA: ENST00000525821.1

CTNND1-211, Transcript of catenin delta 1, humanhuman

TSL 3

Gene CTNND1, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-211ENST00000525821 AP1G2O75843 785 aa12.34□□□□□ -0.43
CTNND1-211ENST00000525821 UNC93B1Q9H1C4 597 aa12.34□□□□□ -0.43
CTNND1-211ENST00000525821 MAP10Q9P2G4 905 aa12.33□□□□□ -0.44
CTNND1-211ENST00000525821 TMEM259Q4ZIN3 620 aa12.31□□□□□ -0.44
CTNND1-211ENST00000525821 TRIM67Q6ZTA4 783 aa12.31□□□□□ -0.44
CTNND1-211ENST00000525821 PDZRN3Q9UPQ7 1066 aa12.31□□□□□ -0.44
CTNND1-211ENST00000525821 GDF9O60383 454 aa12.3□□□□□ -0.44
CTNND1-211ENST00000525821 GFRA3O60609 400 aa12.3□□□□□ -0.44
CTNND1-211ENST00000525821 WNT7BP56706 349 aa12.29□□□□□ -0.44
CTNND1-211ENST00000525821 FOXC1Q12948 553 aa12.29□□□□□ -0.44
CTNND1-211ENST00000525821 LRRN4Q8WUT4 740 aa12.29□□□□□ -0.44
CTNND1-211ENST00000525821 PKD2L1Q9P0L9 805 aa12.29□□□□□ -0.44
CTNND1-211ENST00000525821 SKOR1P84550 965 aa12.28□□□□□ -0.44
CTNND1-211ENST00000525821 PRR20EP86478 221 aa12.28□□□□□ -0.44
CTNND1-211ENST00000525821 PRR20CP86479 221 aa12.28□□□□□ -0.44
CTNND1-211ENST00000525821 PRR20DP86480 221 aa12.28□□□□□ -0.44
CTNND1-211ENST00000525821 PRR20BP86481 221 aa12.28□□□□□ -0.44
CTNND1-211ENST00000525821 PRR20AP86496 221 aa12.28□□□□□ -0.44
CTNND1-211ENST00000525821 LAPTM4AQ15012 233 aa12.28□□□□□ -0.44
CTNND1-211ENST00000525821 BAP1Q92560 729 aa12.28□□□□□ -0.44
CTNND1-211ENST00000525821 ATAD2BQ9ULI0 1458 aa12.27□□□□□ -0.44
CTNND1-211ENST00000525821 TNFRSF10AO00220 468 aa12.26□□□□□ -0.45
CTNND1-211ENST00000525821 WNT7AO00755 349 aa12.26□□□□□ -0.45
CTNND1-211ENST00000525821 USP17L8P0C7I0 530 aa12.26□□□□□ -0.45
CTNND1-211ENST00000525821 SH3BP2P78314 561 aa12.25□□□□□ -0.45
CTNND1-211ENST00000525821 LINC01559Q495D7 138 aa12.25□□□□□ -0.45
CTNND1-211ENST00000525821 RC3H1Q5TC82 1133 aaKnown RBP12.25□□□□□ -0.45
CTNND1-211ENST00000525821 NRG2O14511 850 aaPredicted RBP12.24□□□□□ -0.45
CTNND1-211ENST00000525821 ARMC2Q8NEN0 867 aa12.24□□□□□ -0.45
CTNND1-211ENST00000525821 ZNF511Q8NB15 262 aa12.23□□□□□ -0.45
CTNND1-211ENST00000525821 NR6A1Q15406 480 aa12.22□□□□□ -0.45
CTNND1-211ENST00000525821 THOC2Q8NI27 1593 aaKnown RBP12.22□□□□□ -0.45
CTNND1-211ENST00000525821 BANK1Q8NDB2 785 aa12.21□□□□□ -0.45
CTNND1-211ENST00000525821 MRGPRX2Q96LB1 330 aa12.21□□□□□ -0.45
CTNND1-211ENST00000525821 EHBP1Q8NDI1 1231 aa12.2□□□□□ -0.46
CTNND1-211ENST00000525821 HMX1Q9NP08 348 aaPredicted RBP12.2□□□□□ -0.46
CTNND1-211ENST00000525821 SMARCA2P51531 1590 aa12.2□□□□□ -0.46
CTNND1-211ENST00000525821 TMEM132AQ24JP5 1023 aa12.19□□□□□ -0.46
CTNND1-211ENST00000525821 CYP4X1Q8N118 509 aa12.19□□□□□ -0.46
CTNND1-211ENST00000525821 NBPF14Q5TI25 921 aa12.18□□□□□ -0.46
CTNND1-211ENST00000525821 TOR4AQ9NXH8 423 aa12.18□□□□□ -0.46
CTNND1-211ENST00000525821 SNIP1Q8TAD8 396 aaKnown RBP12.17□□□□□ -0.46
CTNND1-211ENST00000525821 EPS8L1Q8TE68 723 aa12.17□□□□□ -0.46
CTNND1-211ENST00000525821 FKBPLQ9UIM3 349 aa12.17□□□□□ -0.46
CTNND1-211ENST00000525821 TTC24A2A3L6 582 aaPredicted RBP12.16□□□□□ -0.46
CTNND1-211ENST00000525821 GPKOWQ92917 476 aaPredicted RBP eCLIP12.16□□□□□ -0.46
CTNND1-211ENST00000525821 FOXJ1Q92949 421 aa12.16□□□□□ -0.46
CTNND1-211ENST00000525821 HMGXB3Q12766 1538 aa12.16□□□□□ -0.46
CTNND1-211ENST00000525821 VARSP26640 1264 aaKnown RBP12.15□□□□□ -0.46
CTNND1-211ENST00000525821 SIAH2O43255 324 aa12.14□□□□□ -0.47
CTNND1-211ENST00000525821 AGERQ15109 404 aa12.14□□□□□ -0.47
CTNND1-211ENST00000525821 Q6ZNB5 142 aa12.14□□□□□ -0.47
CTNND1-211ENST00000525821 BPHLQ86WA6 291 aaPredicted RBP12.14□□□□□ -0.47
CTNND1-211ENST00000525821 PNMA1Q8ND90 353 aa12.14□□□□□ -0.47
CTNND1-211ENST00000525821 FAM187AA6NFU0 413 aa12.13□□□□□ -0.47
CTNND1-211ENST00000525821 TRIM34Q9BYJ4 488 aa12.13□□□□□ -0.47
CTNND1-211ENST00000525821 SNRKQ9NRH2 765 aa12.13□□□□□ -0.47
CTNND1-211ENST00000525821 BAZ1BQ9UIG0 1483 aaKnown RBP12.13□□□□□ -0.47
CTNND1-211ENST00000525821 ZC3H4Q9UPT8 1303 aaKnown RBP12.12□□□□□ -0.47
CTNND1-211ENST00000525821 DGAT1O75907 488 aa12.12□□□□□ -0.47
CTNND1-211ENST00000525821 PDXDC2PQ6P474 469 aa12.12□□□□□ -0.47
CTNND1-211ENST00000525821 GJD4Q96KN9 370 aaPredicted RBP12.12□□□□□ -0.47
CTNND1-211ENST00000525821 PKDCCQ504Y2 493 aa12.11□□□□□ -0.47
CTNND1-211ENST00000525821 SH3BP5LQ7L8J4 393 aa12.11□□□□□ -0.47
CTNND1-211ENST00000525821 SOCS7O14512 581 aa12.1□□□□□ -0.47
CTNND1-211ENST00000525821 C4orf48Q5BLP8 95 aa12.1□□□□□ -0.47
CTNND1-211ENST00000525821 SH3RF1Q7Z6J0 888 aa12.1□□□□□ -0.47
CTNND1-211ENST00000525821 FAM174AQ8TBP5 190 aa12.1□□□□□ -0.47
CTNND1-211ENST00000525821 PDS5BQ9NTI5 1447 aa12.1□□□□□ -0.47
CTNND1-211ENST00000525821 MTMR14Q8NCE2 650 aa12.09□□□□□ -0.47
CTNND1-211ENST00000525821 SMARCA4P51532 1647 aa12.08□□□□□ -0.48
CTNND1-211ENST00000525821 J3QL48 77 aa12.08□□□□□ -0.48
CTNND1-211ENST00000525821 ALDH1A1P00352 501 aa12.08□□□□□ -0.48
CTNND1-211ENST00000525821 SMPD1P17405 629 aa12.08□□□□□ -0.48
CTNND1-211ENST00000525821 MPNDQ8N594 471 aa12.08□□□□□ -0.48
CTNND1-211ENST00000525821 APBB1O00213 710 aa12.07□□□□□ -0.48
CTNND1-211ENST00000525821 ARHGAP9Q9BRR9 750 aa12.07□□□□□ -0.48
CTNND1-211ENST00000525821 GPSM3Q9Y4H4 160 aa12.07□□□□□ -0.48
CTNND1-211ENST00000525821 LAMC3Q9Y6N6 1575 aa12.07□□□□□ -0.48
CTNND1-211ENST00000525821 MAGEB6P1A0A0J9YX57 407 aa12.06□□□□□ -0.48
CTNND1-211ENST00000525821 PTK2Q05397 1052 aa12.06□□□□□ -0.48
CTNND1-211ENST00000525821 TRAF7Q6Q0C0 670 aa12.06□□□□□ -0.48
CTNND1-211ENST00000525821 C1QTNF2Q9BXJ5 285 aa12.05□□□□□ -0.48
CTNND1-211ENST00000525821 CARD14Q9BXL6 1004 aa12.05□□□□□ -0.48
CTNND1-211ENST00000525821 TLL2Q9Y6L7 1015 aa12.05□□□□□ -0.48
CTNND1-211ENST00000525821 KIF21AQ7Z4S6 1674 aa12.05□□□□□ -0.48
CTNND1-211ENST00000525821 WASF2Q9Y6W5 498 aa12.04□□□□□ -0.48
CTNND1-211ENST00000525821 AVPP01185 164 aa12.03□□□□□ -0.48
CTNND1-211ENST00000525821 ZBTB33Q86T24 672 aa12.03□□□□□ -0.48
CTNND1-211ENST00000525821 CDK15Q96Q40 435 aa12.03□□□□□ -0.48
CTNND1-211ENST00000525821 NDUFB9Q9Y6M9 179 aa12.03□□□□□ -0.48
CTNND1-211ENST00000525821 MYT1Q01538 1121 aa12.02□□□□□ -0.49
CTNND1-211ENST00000525821 ARID5BQ14865 1188 aa12.02□□□□□ -0.49
CTNND1-211ENST00000525821 OCSTAMPQ9BR26 566 aa12.02□□□□□ -0.49
CTNND1-211ENST00000525821 MRC2Q9UBG0 1479 aa12.02□□□□□ -0.49
CTNND1-211ENST00000525821 ERFEQ4G0M1 354 aa12.01□□□□□ -0.49
CTNND1-211ENST00000525821 TRMT44Q8IYL2 757 aaKnown RBP12.01□□□□□ -0.49
CTNND1-211ENST00000525821 LCE2BO14633 110 aa12□□□□□ -0.49
CTNND1-211ENST00000525821 HPS1Q92902 700 aa12□□□□□ -0.49
CTNND1-211ENST00000525821 PRM3Q9NNZ6 103 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms